Identifiers and Description

Gene Model Identifier

TTHERM_00161740

Standard Name

RRM4 (RNA recognition motif-containing protein 4)

Aliases

PreTt28564 | 13.m00523 | 3829.m01385

Description

RNA recognition motif-containing protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF05172 ) MPPN (rrm-like) domain
• ( TIGR01622 ) splicing factor, CC1-like family
• ( PF08648 ) Protein of unknown function (DUF1777)
• ( PF00076 ) RNA recognition motif. (a.k.a. RRM,
• ( PF03011 ) Plasmodium falciparum erythrocyte membrane protein
• ( TIGR01642 ) U2 snRNP auxilliary factor, large

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.6%

TetraMine Data

TTHERM_00161740

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_05423.1	6.998750589667296e-179	hypothetical protein (531 aa)

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00161740(coding)
ATGACAACATTAGAGACATCAGTTTTAAGCGACGAGCAACAGCAGTAGATTTTGCATAAC
TAAACAAGTAATAGTAACTACAATAACGAAGGAGCTCTGAAAGGTTAAAATATATAATAG
GATACCCCAGCTAATGAAAACGATCAAAAAGAGAGGAAGCGATCACCTAGTAATAGAAAA
CATAAGAAGGAGAAGGATCACAAGAAAAAAGACAGAAAAAGTGAGAAGGATAGAAGAAGT
CGCAGTAACTCAGAAAAAAAGAAAAGAGATGAAAAATCTAAAAAAAGAAGGTCTTCTTCT
CGCGATCAAAGAAAGTCAAAGAGTGACAAAGATAGAAGTAGCTCTCGTCACCGTAGCAAA
AGAGAAAAAGATAGAAAGAAAAGCTCTAGTAGAAAGAGACATTCATCAAGAAGCAAGAGA
GATAAATCAAGGAAAAGACATGATAGCAGCAAAAGAAAAAGAAGACATCACTCTTCGTCT
TCATCTTCTTCTTCATCCTCTTAATCTTCTTCGGATAGGTCCAGATCTCGCAGAAGAAGA
CGTTCTTCATCTTTAAATAAAAAGAAACTGAGCGAAGCTGAACTGAGAAGACTTGAAAGA
GAAAAAAGAAATTTAGGAGAATATTACTCATAGCTTAAAAATTCAAGTAGGAGCAAGGAA
AGAAAGAAAAAAAACAAAGAAAACGATAAATTCTGTGATAGTAATAATATGCAAGTAGAC
ACTGAGAAATTCTTTTATGATGGATTTTAATGGTTGCCTAGAATATCTAAAAATAATAGG
CCTGATGAAATTACTCTAAAGCAAACAGAAAAGCAGCGTAAGATTTAACTTCAAAATGTT
CCTCTTGAGTTAGGATTAGATAAATTAGATATTATAAGTTATATCAATCACTTTATGAAG
GAAAAGCATTTAGCCAATGATGGTAATGACAATCCTGTCATAGATTGTGAAATAAATGAA
GAAAATAAAACTGCAAATATTGAATTTTCTTCTGTTGAGGAAACTAATTTAATGTATAAA
CTTGGCTCATTTTAATTCTTTTAAACAGAATGCAAGCTTTTCAGAATTTGTGATAATCAT
TTAACTTAACCAAGTGTAGCAGCTCTTACTCAGCTAGCTATAAGAGAAGCCGAAGTCGCA
GCATAGCTTATCAAAGTCACTGAAAATTTATTCTAAGACAGTGGTGATGATAAAAATAAA
AATAAAAAAACTGATTTAATATCTACAATTATTAAAGTAACTAACACAATCAAATTAGGA
ACTGAGGGCGAATTAACTGAAGAAAATTGGTAAGATTTGCATGCTGATTTACTTGAAGAA
TTTGAAAGATATGGCACAATTGAATTCCATTTTATTATTAGGCCATATTAAGCAACTGTA
GGAGCAAAAGCAGGTACTTTATTTGTATAGTATGCTACTAAAGAAGCAGTATAATTAGCG
ATTTAAACAAACTAAGGCAGATTATTTAATGGATAGAGCTTAAAAATATACAACATCCCA
GAATAAGGATTTAATTTAAACTTTAGACCCTTGTTACAAGTTCGTTGA

>TTHERM_00161740(protein)
MTTLETSVLSDEQQQQILHNQTSNSNYNNEGALKGQNIQQDTPANENDQKERKRSPSNRK
HKKEKDHKKKDRKSEKDRRSRSNSEKKKRDEKSKKRRSSSRDQRKSKSDKDRSSSRHRSK
REKDRKKSSSRKRHSSRSKRDKSRKRHDSSKRKRRHHSSSSSSSSSSQSSSDRSRSRRRR
RSSSLNKKKLSEAELRRLEREKRNLGEYYSQLKNSSRSKERKKKNKENDKFCDSNNMQVD
TEKFFYDGFQWLPRISKNNRPDEITLKQTEKQRKIQLQNVPLELGLDKLDIISYINHFMK
EKHLANDGNDNPVIDCEINEENKTANIEFSSVEETNLMYKLGSFQFFQTECKLFRICDNH
LTQPSVAALTQLAIREAEVAAQLIKVTENLFQDSGDDKNKNKKTDLISTIIKVTNTIKLG
TEGELTEENWQDLHADLLEEFERYGTIEFHFIIRPYQATVGAKAGTLFVQYATKEAVQLA
IQTNQGRLFNGQSLKIYNIPEQGFNLNFRPLLQVR

>TTHERM_00161740(gene)
ATGACAACATTAGAGACATCAGTTTTAAGCGACGAGCAACAGCAGTAGATTTTGCATAAC
TAAACAAGTAATAGTAACTACAATAACGAAGGAGCTCTGAAAGGTTAAAATATATAATAG
GATACCCCAGCTAATGAAAACGATCAAAAAGAGAGGAAGCGATCACCTAGTAATAGAAAA
CATAAGAAGGAGAAGGATCACAAGAAAAAAGACAGAAAAAGTGAGAAGGATAGAAGAAGT
CGCAGTAACTCAGAAAAAAAGAAAAGAGATGAAAAATCTAAAAAAAGAAGGTCTTCTTCT
CGCGATCAAAGAAAGTCAAAGAGTGACAAAGATAGAAGTAGCTCTCGTCACCGTAGCAAA
AGAGAAAAAGATAGAAAGAAAAGCTCTAGTAGAAAGAGACATTCATCAAGAAGCAAGAGA
GATAAATCAAGGAAAAGACATGATAGCAGCAAAAGAAAAAGAAGACATCACTCTTCGTCT
TCATCTTCTTCTTCATCCTCTTAATCTTCTTCGGATAGGTCCAGATCTCGCAGAAGAAGA
CGTTCTTCATCTTTAAATAAAAAGAAACTGAGCGAAGCTGAACTGAGAAGACTTGAAAGA
GAAAAAAGAAATTTAGGAGAATATTACTCATAGCTTAAAAATTCAAGTAGGAGCAAGGAA
AGAAAGAAAAAAAACAAAGAAAACGATAAATTCTGTGATAGTAATAATATGCAAGTAGAC
ACTGAGAAATTCTTTTATGATGGATTTTAATGGTTGCCTAGAATATCTAAAAATAATAGG
CCTGATGAAATTACTCTAAAGCAAACAGAAAAGCAGCGTAAGATTTAACTTCAAAATGTT
CCTCTTGAGTTAGGATTAGATAAATTAGATATTATAAGTTATATCAATCACTTTATGAAG
GAAAAGCATTTAGCCAATGATGGTAATGACAATCCTGTCATAGATTGTGAAATAAATGAA
GAAAATAAAACTGCAAATATTGAATTTTCTTCTGTTGAGGAAACTAATTTAATGTATAAA
CTTGGCTCATTTTAATTCTTTTAAACAGAATGCAAGCTTTTCAGAATTTGTGATAATCAT
TTAACTTAACCAAGTGTAGCAGCTCTTACTCAGCTAGCTATAAGAGAAGCCGAAGTCGCA
GCATAGCTTATCAAAGTCACTGAAAATTTATTCTAAGACAGTGGTGATGATAAAAATAAA
AATAAAAAAACTGATTTAATATCTACAATTATTAAAGTAACTAACACAATCAAATTAGGA
ACTGAGGGCGAATTAACTGAAGAAAATTGGTAAGATTTGCATGCTGATTTACTTGAAGAA
TTTGAAAGATATGGCACAATTGAATTCCATTTTATTATTAGGCCATATTAAGCAACTGTA
GGAGGTAAATTTATTTTAATTTTTATTAAAATTAATCATTTTTTTTTATAAAAACAGCAA
AAGCAGGTACTTTATTTGTATAGTATGCTACTAAAGAAGCAGTATAATTAGCGATTTAAA
CAAACTAAGGCAGATTATTTAATGGATAGAGCTTAAAAATATACAACATCCCAGAATAAG
GATTTAATTTAAACTTTAGACCCTTGTTACAAGTTCGTTGA