Identifiers and Description

Gene Model Identifier

TTHERM_00600630

Standard Name

RRM38 (RNA recognition motif-containing protein 38)

Aliases

PreTt22126 | 83.m00195 | 3685.m00087

Description

RNA recognition motif-containing protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF04702 ) Vicilin N terminal region
• ( PF04950 ) Protein of unknown function (DUF663)
• ( PF00076 ) RNA recognition motif. (a.k.a. RRM,

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 11%

TetraMine Data

TTHERM_00600630

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_14920.1	9.997093137033517e-262	RNA recognition domain-contain ing protein domain-containing protein (942 aa)
Stentor Coeruleus	SteCoe_21798	0.00000000027894680928689246
Oxytricha	Contig1235.1.g124	0.000000009000371344152433	RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
SGD	YER165W	0.0004999512321494991	PAB1 Poly(A) binding protein, part of the 3-end RNA-processi ng complex, mediates interacti ons between the 5 cap structur e and the 3 mRNA poly(A) tail, involved in control of poly(A ) tail length, interacts with translation factor eIF-4G

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00600630(coding)
ATGAGTTAAGGCGAAGAAACTTTCAAAAGCTTATCTGCCGCATTGGAAGGCTTGAAAAAC
AGTCAATCTCTAGCATACTTTTAGTAATAGAATGCTGATCCTTACAATTAAATGCATAAA
TAAAAAAATACCTACAACAGCAATTATCTTACACAAGATGAGTAGAATCTTCATTATCTT
GAGGATTCTCCTGAGCCAGAGCATTTTGAATTCTAGAATGTGAACGACCCTCATGAATAA
CTTAACTAGATGTATCAAAGTAGATAAATCTATAAGTAGCAATAATAGGGTGCAGGATTT
TAGAGTTCTTAAAAGCCTTACTATAAAAATAACTATGAAGGTACCCAAGGTAGTCATAGA
TAGTATAATAATCCATAATCTTATAACTAAGCTGCTTAAAGTCACACTAATGGTTATCAA
GGTTAAAGAGTATCTAATTACAACAGATATCAAGGCTAGCAAACTGGCTATTAAGGATAA
AACTATATTCCTAATGAAAGAAACTTTTCACAAGGAGCAAAATATCAAGGTTAAAAACCT
CCAGGCGCTTTTAATGCTCATCATTAGAACCAATTTAACAACCAAAATTCGCAATAGCAA
GGATAACAATATCATGGTCATTCAAATACATTCCCCTAAGGAGAAAAGTCAGCAGGTGGT
ATTCATATTGAAGGTACAAAGATATTTATAAATAATATTGAACCCACTGTGAGCTAAGAA
GAAATTCACCACTATTTTGATCCTTATGGAAAGATCAATGATTTAAAAGTATTCCACAGA
AATGGGTAAAACTATGCTTATGTTATTTTTGAGAAGTACGAAGACGCTTTCAGAGCAACT
AATGATGTTTCTCCCTAACCTAATTGGACAGTATCATTAGCTAAGTCAAAGAACACAGTT
ATGCAGTATCAAAGATCAACACTTTTCGAATAAGATGGTTAAAATCCTAATCCTCCATAT
ACAGGCACAAGCAAATATAATAATCCTGCAGGAAATCCACCTCATTTCAAAAAGCCATTT
AATAAATATTAATAAAATCCTAACATACAAAACCAACATCCAAATCCAAGATATGAAAAA
TCTGCAGGCACCAACTTTAGCCAAAACTAGTATGAATCATCTAATGGGGAAAAAATTCTT
TAAAATATCAGTAATTTCAATGATAATAATGCAAATGGTCATAATAACTTAGGAGAAGTT
CTTTCCAACCATAAAACTTAAATTAACTAAACTATCTTAGTTAGAGAAATCTGGGTGAGC
AACATAGATGAAAAGTGCAAGCCTTATATTAGAGAAATTATTGAAGACTTCTTTGGAGGT
ATAGAAGAGGTAGAGTTCTTTGATAGAGGCAAAGACTCTTTTGCATTTATAAAATTTTTT
ATGGTTTAAACTGCTTATTTAGCTTTTACAAATAAGGAAAAAATTGCAGAACTTCTTGAG
ACAGATTAAGTAAAATTAACATACTCTGATCCTTCTAGAAGAAAAAATATCATTGGTGAT
CACGAAGATTATATGAGAGATGAAAATTTATCTCCTGTTTTGTATATCAGTTTCCCTTAT
GGTTTCAAAGTGAAAAAAAGTGTCATCTAAAAAATTGCCAGTGACTACGGAACAGTATTA
AACGTTACTTTGAAGAGAAGTGAAGATCCTAAATAAACTTCCAGTGTTTTAGTAGAATTC
TAGGATTTAAAAGATGCTAAATTTGCTTTCAAACATATGAGAGAAGATCATGATAAGATG
CATCCTAAATGTGAATTTGCAATTTTGCTCAATTCTGAAAAGTTTGTTAAAGAAAACAAT
TTAAAACTCAAAGAAAAAATCAAACCTACTGTATTACCTGGGTAAGCACCAACAACTACT
TTCATTTAGTAAAAGCCTTTAGCTAGAAAACCTATTAATATAAATGAAAACGCTAATAAT
GCTTTATCAGATATAGCTGGTATTCGAATTTAAAAGTAACTTTAGTCCAAAGGAAGATAG
TTTTCTCCTGAAAAAGATGCTGAAATAAATTAAAAACGTACTTATAATTAATTCAAGCAA
AGTTCTTTAAATACAAGCTAGGATTAAGGTTATAATCCGGATGAGTAAGATGCAGAATTA
CTTGTAGAAGACGACGATGATGAAAATTTCATTTGGTCTGGTTTCATTTCAATTAATAAA
AAGGGTAGATGTGGTATGGATGCAAAAGTAATCTAAAGCCAAGGCTAATTAGATCTTGAT
ACTTATAATCTCGTGATGACTACTAAATGTTAGCTTTCTGAGCCCTTGAGATATCCCCCT
TATTCAGTACTTATATTTAGACCTTCAAACGAAACAGAAAAGAAACCTTTCAAAGATGTT
AAAACATTTTTGAATAGCAACCCTAATTAAGCTGGTGTAATTCACACTAAAAATCTTATA
ATTTATATGTTCCCATCTAATGAGTAAGCCTTAAAATTCTACCCTCAACTCAAAGAAGGA
AATATTTTAGCTCTATGTCACAACCAAGACTCTATCAGAGGGAATTTATCAAAGAAAGAA
GGAAAGTATGATGAAAAATTGTAAGCAAGATAAAAAGCTGCTTTGAATGATTCACATGAG
GATGACGAAGAAGATAATATGATTTATGATCCTACATCTATCTTACAAGATACATCAAAA
TATAATGGTAAAAAAGGTTAATAACAACACAGATATGAACATGATGAAGACAACTAATAC
TAAGAAGAAAATATTTATGATCCAAACAAAATAAATATGTAAAAAGATGATCCAAAAACT
GATATTTCTGACTTAATAGATAATCCCTCACTTATGGATAGCATGTTGAAGAGTTTGTAT
TGA

>TTHERM_00600630(protein)
MSQGEETFKSLSAALEGLKNSQSLAYFQQQNADPYNQMHKQKNTYNSNYLTQDEQNLHYL
EDSPEPEHFEFQNVNDPHEQLNQMYQSRQIYKQQQQGAGFQSSQKPYYKNNYEGTQGSHR
QYNNPQSYNQAAQSHTNGYQGQRVSNYNRYQGQQTGYQGQNYIPNERNFSQGAKYQGQKP
PGAFNAHHQNQFNNQNSQQQGQQYHGHSNTFPQGEKSAGGIHIEGTKIFINNIEPTVSQE
EIHHYFDPYGKINDLKVFHRNGQNYAYVIFEKYEDAFRATNDVSPQPNWTVSLAKSKNTV
MQYQRSTLFEQDGQNPNPPYTGTSKYNNPAGNPPHFKKPFNKYQQNPNIQNQHPNPRYEK
SAGTNFSQNQYESSNGEKILQNISNFNDNNANGHNNLGEVLSNHKTQINQTILVREIWVS
NIDEKCKPYIREIIEDFFGGIEEVEFFDRGKDSFAFIKFFMVQTAYLAFTNKEKIAELLE
TDQVKLTYSDPSRRKNIIGDHEDYMRDENLSPVLYISFPYGFKVKKSVIQKIASDYGTVL
NVTLKRSEDPKQTSSVLVEFQDLKDAKFAFKHMREDHDKMHPKCEFAILLNSEKFVKENN
LKLKEKIKPTVLPGQAPTTTFIQQKPLARKPININENANNALSDIAGIRIQKQLQSKGRQ
FSPEKDAEINQKRTYNQFKQSSLNTSQDQGYNPDEQDAELLVEDDDDENFIWSGFISINK
KGRCGMDAKVIQSQGQLDLDTYNLVMTTKCQLSEPLRYPPYSVLIFRPSNETEKKPFKDV
KTFLNSNPNQAGVIHTKNLIIYMFPSNEQALKFYPQLKEGNILALCHNQDSIRGNLSKKE
GKYDEKLQARQKAALNDSHEDDEEDNMIYDPTSILQDTSKYNGKKGQQQHRYEHDEDNQY
QEENIYDPNKINMQKDDPKTDISDLIDNPSLMDSMLKSLY

>TTHERM_00600630(gene)
ATGAGTTAAGGCGAAGAAACTTTCAAAAGCTTATCTGCCGCATTGGAAGGCTTGAAAAAC
AGTCAATCTCTAGCATACTTTTAGTAATAGAATGCTGATCCTTACAATTAAATGCATAAA
TAAAAAAATACCTACAACAGCAATTATCTTACACAAGATGAGTAGAATCTTCATTATCTT
GAGGATTCTCCTGAGCCAGAGCATTTTGAATTCTAGAATGTGAACGACCCTCATGAATAA
CTTAACTAGATGTATCAAAGTAGATAAATCTATAAGTAGCAATAATAGGGTGCAGGATTT
TAGAGTTCTTAAAAGCCTTACTATAAAAATAACTATGAAGGTACCCAAGGTAGTCATAGA
TAGTATAATAATCCATAATCTTATAACTAAGCTGCTTAAAGTCACACTAATGGTTATCAA
GGTTAAAGAGTATCTAATTACAACAGATATCAAGGCTAGCAAACTGGCTATTAAGGATAA
AACTATATTCCTAATGAAAGAAACTTTTCACAAGGAGCAAAATATCAAGGTTAAAAACCT
CCAGGCGCTTTTAATGCTCATCATTAGAACCAATTTAACAACCAAAATTCGCAATAGCAA
GGATAACAATATCATGGTCATTCAAATACATTCCCCTAAGGAGAAAAGTCAGCAGGTGGT
ATTCATATTGAAGGTACAAAGATATTTATAAATAATATTGAACCCACTGTGAGCTAAGAA
GAAATTCACCACTATTTTGATCCTTATGGAAAGATCAATGATTTAAAAGTATTCCACAGA
AATGGGTAAAACTATGCTTATGTTATTTTTGAGAAGTACGAAGACGCTTTCAGAGCAACT
AATGATGTTTCTCCCTAACCTAATTGGACAGTATCATTAGCTAAGTCAAAGAACACAGTT
ATGCAGTATCAAAGATCAACACTTTTCGAATAAGATGGTTAAAATCCTAATCCTCCATAT
ACAGGCACAAGCAAATATAATAATCCTGCAGGAAATCCACCTCATTTCAAAAAGCCATTT
AATAAATATTAATAAAATCCTAACATACAAAACCAACATCCAAATCCAAGATATGAAAAA
TCTGCAGGCACCAACTTTAGCCAAAACTAGTATGAATCATCTAATGGGGAAAAAATTCTT
TAAAATATCAGTAATTTCAATGATAATAATGCAAATGGTCATAATAACTTAGGAGAAGTT
CTTTCCAACCATAAAACTTAAATTAACTAAACTATCTTAGTTAGAGAAATCTGGGTGAGC
AACATAGATGAAAAGTGCAAGCCTTATATTAGAGAAATTATTGAAGACTTCTTTGGAGGT
ATAGAAGAGGTAGAGTTCTTTGATAGAGGCAAAGACTCTTTTGCATTTATAAAATTTTTT
ATGGTTTAAACTGCTTATTTAGCTTTTACAAATAAGGAAAAAATTGCAGAACTTCTTGAG
ACAGGTAAATATTTATTCTTCATAACATATTATTTTATTTTTATGAATCTGAAAAATTCA
AACAAATTTGATTTTTTCACCATTTCAATATCTATCTATCCTAAATAAAAATCCCTATTA
AAAAATCAAAATAAAATTCAAAAAATATAAAGATAAGAAATTAAAAAGAAAAGAAAAAAT
AAATCAAATCTAAAATTCGCGCGTAATAAAATAAATTAAAAATAATAAGAAAGTAAATCA
TAAATCTATAAAAAAGAAATAATAATAATAATAATAATTATAATAATAAATAAAACTCTT
ATCTGAAATTTAAAAGACAATCAAAAGAAAAATATTGGGGAATATCAAACCATAAATAAA
TAAATAAATAAATAAATAAACAAAAAAATAAAGACAAACGGGGGAATCATTTATGAATAA
TAAAATCTAATAAATACTAAATTTAAAAAAGATCATTTATATAAAGTTTTACAAAAGATA
AAAAATATCATCAACAAAAATAAAAATTTTACATTAGAATTTTACTTTCAAAAATTTTTA
AATAAAACTAAATGAAATTTAAATCAAATTTGTTAAAAAGACTTTATAAAAAGATAACAA
ACAAACATGATTTGTAAAATTAAATAACAGAAATGTGATAATTTTCTTAAGTAAAATATT
AATAAAATAATAAAACTTTAAGTGTGATATTTATTAATTAATTAATCAATATGAAAATCC
ATAGTTACAAAAATAAAAAATAATTTACCTAAAATCAAATAACACACACAACCAATTGTT
GGATGAATTTAATTTAAATTATAAAAATATAATTTAACTATTATAAAATATAAATTAAAA
TATAGATTAAGTAAAATTAACATACTCTGATCCTTCTAGAAGAAAAAATATCATTGGTGA
TCACGAAGATTATATGAGAGATGAAAATTTATCTCCTGTTTTGTATATCAGTTTCCCTTA
TGGTTTCAAAGTGAAAAAAAGTGTCATCTAAAAAATTGCCAGTGACTACGGAACAGTATT
AAACGTTACTTTGAAGAGAAGTGAAGATCCTAAATAAACTTCCAGTGTTTTAGTAGAATT
CTAGGATTTAAAAGATGCTAAATTTGCTTTCAAACATATGAGAGAAGATCATGATAAGAT
GCATCCTAAATGTGAATTTGCAATTTTGCTCAATTCTGAAAAGTTTGTTAAAGAAAACAA
TTTAAAACTCAAAGAAAAAATCAAACCTACTGTATTACCTGGGTAAGCACCAACAACTAC
TTTCATTTAGTAAAAGCCTTTAGCTAGAAAACCTATTAATATAAATGAAAACGCTAATAA
TGCTTTATCAGATATAGCTGGTATTCGAATTTAAAAGTAACTTTAGTCCAAAGGAAGATA
GTTTTCTCCTGAAAAAGATGCTGAAATAAATTAAAAACGTACTTATAATTAATTCAAGCA
AAGTTCTTTAAATACAAGCTAGGATTAAGGTTATAATCCGGATGAGTAAGATGCAGAATT
ACTTGTAGAAGACGACGATGATGAAAATTTCATTTGGTCTGGTTTCATTTCAGTAATTAT
TTTTTCAAAACTTTAATAAACTAAATTTATTTAAAAATCTTTTAACAGATTAATAAAAAG
GGTAGATGTGGTATGGATGCAAAAGTAATCTAAAGCCAAGGCTAATTAGATCTTGATACT
TATAATCTCGTGATGACTACTAAATGTTAGCTTTCTGAGCCCTTGAGATATCCCCCTTAT
TCAGTACTTATATTTAGACCTTCAAACGAAACAGAAAAGAAACCTTTCAAAGATGTTAAA
ACATTTTTGAATAGCAACCCTAATTAAGCTGGTGTAATTCACACTAAAAATCTTATAATT
TATATGTTCCCATCTAATGAGTAAGCCTTAAAATTCTACCCTCAACTCAAAGAAGGAAAT
ATTTTAGCTCTATGTCACAACCAAGACTCTATCAGAGGGAATTTATCAAAGAAAGAAGGA
AAGTATGATGAAAAATTGTAAGCAAGATAAAAAGCTGCTTTGAATGATTCACATGAGGAT
GACGAAGAAGATAATATGATTTATGATCCTACATCTATCTTACAAGATACATCAAAATAT
AATGGTAAAAAAGGTTAATAACAACACAGATATGAACATGATGAAGACAACTAATACTAA
GAAGAAAATATTTATGATCCAAACAAAATAAATATGTAAAAAGATGATCCAAAAACTGAT
ATTTCTGACTTAATAGATAATCCCTCACTTATGGATAGCATGTTGAAGAGTTTGTATTGA