Identifiers and Description
Gene Model Identifier
TTHERM_00484731Standard Name
RRM28 (RNA Recognition Motif-containing protein 28)Aliases
3719.m00872Description
RRM28 splicing factor u2af large subunitGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
No Data fetched for Gene Ontology Annotations
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 11.5%
TetraMine Data
TTHERM_00484731
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_14252.2 9.997093137033517e-262 hypothetical protein (596 aa)
Oxytricha Contig1218.1.g100 3.000842737734004e-34 RNA recognition motif_ (a_k_a_
RRM, RBD, or RNP domain)
WormBase WBGene00006697 9.995528898049344e-31 locus:uaf-1 status:Confirmed
UniProt:Q8MXS2 protein_id
:CCD62281.1
DictyBase DDB_G0286395 5.998760051700188e-30 u2af2 on chromosome: 4 positio
n 4405482 to 4407497
Stentor Coeruleus SteCoe_19768 0.00000000003775134544279098 SGD YIL061C 0.00000030014504373857585 SNP1 Component of U1 snRNP req
uired for mRNA splicing via sp
liceosome; substrate of the ar
ginine methyltransferase Hmt1p
; may interact with poly(A) po
lymerase to regulate polyadeny
lation; homolog of human U1 70
K protein
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00484731(protein)
MSFQNQEIHDDLNEMQKLTEAQEEQFKQQNDNDYDQVGTSGYQEIIKRSRENSIDSARSR
SRSINERKRNYNRQQNSNEEESPKMVNKVEVPVIKLDNQSGYRHARRLYIGNIPETINQE
YLSEWLYRSLEAAGGLQPSLPSENPIVKCEIDPKGRFAFTELRSIEETTALLQLDGIILW
HRQLRIRRPTEYEKFPKVQGQFEANIPKLNFDLFKTVGIVIIPTIVDDGPNKIFLANLPT
KMDELMILDELKLRDMGEIKAFHLVKDNQTNQSKGYAFFEFKDPSLTDNCIETLHGMQYA
GRTLTCKRSQIGGLGNKQMSTGNNKQNNNRNSNQQNNLGGNNNMQRQSFSSENIDSIQGQ
NQQGINEGSGFFPNYQSNTQGGGNNQNKGMNQNYQNNGNNHNNNNKRGRNFGNQNNSNNN
YYNNNGAGMNNGNNNNNGNNRRFQNNNNMNHNQQGQFTNGGNKFNKGHGNNNGMSNKKQN
QWNGQQNNQIPSQDNQTGISSDGYYEGSSSQIGQQYDVSQMYNYQQSQQGSHYMMQDQSN
PYQ>TTHERM_00484731(coding)
ATGAGTTTTCAAAATCAAGAAATTCACGATGACTTGAATGAAATGTAAAAGCTAACTGAA
GCATAGGAAGAACAATTCAAGCAACAAAATGACAATGACTATGATTAAGTAGGAACAAGT
GGTTATTAAGAAATAATCAAAAGATCAAGAGAAAATTCGATAGATTCAGCCCGTTCGCGC
TCAAGATCAATCAATGAAAGAAAGAGAAATTATAACAGATAGCAAAATAGCAACGAAGAA
GAGAGTCCAAAGATGGTCAATAAAGTAGAAGTACCTGTGATTAAGTTAGATAACTAATCA
GGATATCGTCACGCTAGACGTCTTTATATTGGTAACATTCCTGAAACTATTAATTAAGAA
TATCTAAGTGAATGGCTTTATCGTTCTCTTGAAGCAGCTGGAGGTCTTTAGCCTTCTTTG
CCCTCAGAAAATCCAATAGTAAAATGTGAAATTGATCCTAAAGGAAGGTTTGCATTTACT
GAGTTAAGGTCAATTGAAGAAACCACTGCTTTGCTTCAATTAGATGGAATTATTTTGTGG
CACAGATAATTAAGAATAAGAAGACCTACTGAATATGAAAAGTTCCCTAAGGTTCAAGGA
CAATTTGAAGCTAATATTCCCAAATTGAATTTCGATCTTTTCAAAACTGTTGGAATAGTA
ATTATTCCTACTATTGTTGATGATGGTCCTAACAAGATATTCTTGGCTAACTTGCCCACT
AAGATGGATGAGTTAATGATTTTAGATGAATTAAAACTTAGAGATATGGGTGAAATTAAA
GCATTCCATTTAGTTAAAGATAATCAAACTAACTAAAGTAAGGGATATGCCTTTTTTGAA
TTCAAAGATCCTTCTCTTACTGATAATTGTATAGAGACATTACATGGTATGCAATATGCT
GGTAGAACTCTTACATGCAAGAGATCTTAAATAGGAGGCTTAGGCAATAAATAAATGTCA
ACAGGAAACAATAAATAAAACAATAATAGAAATAGCAATCAGTAAAATAACTTAGGTGGT
AATAATAACATGCAAAGATAGAGTTTCTCTTCAGAAAATATTGATTCTATATAGGGATAA
AACTAATAAGGTATCAATGAAGGCAGTGGATTCTTTCCCAATTACTAATCAAACACACAA
GGTGGTGGAAATAACTAAAACAAGGGTATGAACTAAAATTATCAAAATAATGGCAATAAT
CATAACAACAATAATAAAAGAGGAAGAAACTTTGGAAATTAAAATAACTCAAATAACAAT
TACTACAATAATAATGGGGCAGGAATGAATAATGGTAATAACAATAATAATGGAAACAAT
AGAAGATTCTAAAATAACAACAATATGAATCACAATTAGTAAGGTTAGTTTACAAACGGA
GGAAATAAATTCAATAAAGGGCATGGTAACAACAACGGAATGAGTAACAAGAAGTAAAAT
TAATGGAACGGTTAGCAAAATAATTAAATCCCAAGCTAAGATAATTAAACTGGTATCTCC
TCTGATGGATATTATGAAGGAAGTAGTAGCTAAATTGGCTAATAATATGATGTTAGCTAA
ATGTACAACTATCAATAATCATAACAAGGATCTCATTATATGATGCAAGACTAATCTAAT
CCTTATTAATGA>TTHERM_00484731(gene)
ATGAGTTTTCAAAATCAAGAAATTCACGATGACTTGAATGAAATGTAAAAGCTAACTGAA
GCATAGGAAGAACAATTCAAGCAACAAAATGACAATGACTATGATTAAGTAGGAACAAGT
GGTTATTAAGAAATAATCAAAAGATCAAGAGAAAATTCGATAGATTCAGCCCGTTCGCGC
TCAAGATCAATCAATGAAAGAAAGAGAAATTATAACAGATAGCAAAATAGCAACGAAGAA
GAGAGTCCAAGTAATATAAATCAAAATAGCAGGCCTGTTGCTTAGAGAAGCAATCATTTC
TTTGAGTAAAATGATGAATAGAATGAATAAAATTTAGGAGAAAATGATTTGAATAGTAAC
AACACAACTGGAGTTGATTTTAGTAAAATGAATTTCAACTAAAGTTTGTAATAACTTTAA
GAGATGGTCAATAAAGTAGAAGTACCTGTGATTAAGTTAGATAACTAATCAGGATATCGT
CACGCTAGGTATAATTTCATAGATTAATAAATTTACTAAATAACCACGGTATTTTCCTTC
CTGATTAATAAAAGCAGCTTTAATAACATAGCTCTGCTTTAATTGCATTAAGTAATGCTA
TTTTGCAGAAACATGTTGTTTTAAAGAGCATACTTTTGAAGCTGAAAGAAGAAAAAAAAC
TAAATAAATAACTTCGCCATAATATCAAAAGCAAACAAGCAAGAAAAAAAAACAAACAAA
CAAACAAACCTAATTTTCTTCCCCACTCTTTTTCAAATTTTTTCTCTTTACCATTTTTGT
AGCAATAAAAAAATCATCTTATTTTCTGTTTCTTTGATTTTTTATCATTGACCACCCCTC
ACAAATAATTTACAAAAAACTTTCTAATCCCCCTCCTTTCAATATTTTGCTTTGTATTAT
AAAGCAAAATCTATTTATCTATCTATCTAATCTTATCTCTCATTCATTCATTTATTCAAT
CTTTCTTCATTGATTCTTATTTTTTTTCTTTCTAATTTACCATGAATACATACTTATATT
ATATGTATATAATATTTTATAATCATATTATAATTAGCACCATACTTTATCATCAATAGC
AATTATTAAAAAATAAATCTTAATTTCTTTTCCTTCTTTTTCAATCAAATAAAGAATTTA
AAATTATTTTTTTCCCCCTCTTTTCTTCAATCTTTTTTTATTTATGACTGACCAAAAATT
AATTTTAAAAACTATATGCTACCTGTTTTTTCAAATATCTTCTTTTTCATTCTTTTTAAT
AGAAAAAGTCAACAAAAGAGAATTACATGATATTATACATTTATGAATCATCAAATATTT
TGTAGTATTTACTGCTTTCTCTCTTCTTTCTTCTTTTATTTTTTGCTTCTGCTCTAAATA
TTCATTCATTCATTTATTATTATTCTTCATATGTTATTTAATTTTACTTAAAATTGTTCA
TTTAAAATCATTTTAGTAGAAAAAGTATCTCTCCTTTACGTACCATTTAATTTTTTTAAA
ATTAGAAAGAAAACAAATAAACAAACATTCATATAAATAAACTAACTATTTACAGGATTG
ATTTAGGGTTGAAACAAATAAAAATAAACAAATAATAATGTATTATAAGTTGAGGGAAAG
ATCCGTATCACCTTCAAAGATATTTAAATAAAAAAAATCTTCTCATACAGTTTTAATATG
ATTCGATATCAATAGCTTTTTAATATTGCTATTTCGTGATATTTTTGAATTTAAATCAGG
AAAATATGCCGCTAATTTTAATATTTTTGAAATTTCATGAATTAATTAATTTAATTATAG
ACGTCTTTATATTGGTAACATTCCTGAAACTATTAATTAAGAATATCTAAGTGAATGGCT
TTATCGTTCTCTTGAAGCAGCTGGAGGTCTTTAGCCTTCTTTGCCCTCAGAAAATCCAGT
AAAAAATTTTATTAATAAATATTTCTAAAATTAAAAATATTATTTTTAACTTTATAAAAG
ATAGTAAAATGTGAAATTGATCCTAAAGGAAGGTTTGCATTTACTGAGTTAAGGTCAATT
GAAGAAACCACTGCTTTGCTTCAATTAGATGGAATTATTTTGGTAATAAAATAAACAATA
AAACATTTTATAATTTTAATTAATTAATTAATTAAAAAATTAGTGGCACAGATAATTAAG
AATAAGAAGACCTACTGAATATGAAAAGTTCCCTAAGGTTCAAGGACAATTTGAAGCTAA
TGTAATTAATTAATTTCAATTATTTTAATTATTTAATTTTACTTATTTAAAATAGATTCC
CAAATTGAATTTCGATCTTTTCAAAACTGTTGGAATAGTAATTATTCCTACTATTGTTGA
TGATGGTCCTAACAAGATATTCTTGGCTAACTTGCCCACTAAGATGGATGAGTTAATGAT
TTTAGATGAATTAAAACTTAGAGATATGGGGTAATAATTTACTTTTGATTATATATTTTA
AAACTTGTTAATTCATATTTTTTTGATTAAAACAGTGAAATTAAAGCATTCCATTTAGTT
AAAGATAATCAAACTAACTAAAGTAAGGGATATGCCTTTTTTGAATTCAAAGATCCTTCT
CTTACTGATAATTGTATAGAGACATTACATGGTATGCAATATGCTGGTAGAACTCTTACA
TGCAAGAGATCTTAAATAGGAGGCTTAGGCAATAAATAAATGTCAACAGGAAACAATAAA
TAAAACAATAATAGAAATAGCAATCAGTAAAATAACTTAGGTGGTAATAATAACATGCAA
AGATAGAGTTTCTCTTCAGAAAATATTGATTCTATATAGGGATAAAACTAATAAGGTATC
AATGAAGGCAGTGGATTCTTTCCCAATTACTAATCAAACACACAAGGTGGTGGAAATAAC
TAAAACAAGGGTATGAACTAAAATTATCAAAATAATGGCAATAATCATAACAACAATAAT
AAAAGAGGAAGAAACTTTGGAAATTAAAATAACTCAAATAACAATTACTACAATAATAAT
GGGGCAGGAATGAATAATGGTAATAACAATAATAATGGAAACAATAGAAGATTCTAAAAT
AACAACAATATGAATCACAATTAGTAAGGTTAGTTTACAAACGGAGGAAATAAATTCAAT
AAAGGGCATGGTAACAACAACGGAATGAGTAACAAGAAGTAAAATTAATGGAACGGTTAG
CAAAATAATTAAATCCCAAGCTAAGATAATTAAACTGGTATCTCCTCTGATGGATATTAT
GAAGGAAGTAGTAGCTAAATTGGCTAATAATATGATGTTAGCTAAATGTACAACTATCAA
TAATCATAACAAGGATCTCATTATATGATGCAAGACTAATCTAATCCTTATTAATGA