Identifiers and Description

Gene Model Identifier

TTHERM_00444830

Standard Name

RRM24 (RNA recognition motif-containing protein 24)

Aliases

PreTt03851 | 51.m00217 | 3704.m00073

Description

RNA recognition motif-containing protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Molecular Function

• zinc ion binding (IEA) | GO:0008270
• nucleic acid binding (IEA) | GO:0003676

Domains

• ( PF07649 ) C1-like domain
• ( PF08049 ) IlvB leader peptide
• ( PF05172 ) MPPN (rrm-like) domain
• ( PF00097 ) zinc finger, C3HC4 type (RING
• ( PF06906 ) Protein of unknown function (DUF1272)
• ( PF00642 ) Zinc finger C-x8-C-x5-C-x3-H type (and
• ( PF00076 ) RNA recognition motif. (a.k.a. RRM,

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 9.8%

TetraMine Data

TTHERM_00444830

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_10872.1	9.997093137033517e-262	hypothetical protein (857 aa)
Oxytricha	Contig22254.0.g55	6.000354955737408e-39	RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
DictyBase	DDB_G0275005	1.9998323414791308e-36	DDB_G0275005 on chromosome: 2 position 4898014 to 4903137
WormBase	WBGene00003827	4.000352986427571e-28	locus:ntl-4 status:Partially _confirmed protein_id:CDM634 96.1
SGD	YER068W	4.999723464643358e-28	MOT2 Subunit of the CCR4-NOT c omplex, which has roles in tra nscription regulation, mRNA de gradation, and post-transcript ional modifications; with Ubc4 p, ubiquitinates nascent polyp eptide-associated complex subu nits and histone demethyase Jh d2p
Stentor Coeruleus	SteCoe_32514	0.0000000000018795288165390832

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00444830(coding)
ATGTCAGCAAAGATAAAACCAAAATAACCTCAGAAGAGATTGTAGTGTTAATATTGCAAG
GAAAAGATAGAAAATGACAATTACTATTTATGCGATTGTGGATATTAATATTTTAATCAA
TCACTTTAGACATAGGAGTGTTTTACCAAATTACTTTAGATTATCCAAATCCTTTTAGTC
ACTAAAATAAATATCAATAAGTTTTTTTCATATGGAATTCGAATAAAAAGAGAGTATTTT
CAATTTGAAGTATGTCTGATTGAAATGTGTTGGGATTGTTATGACGATTTTTAAGACAAT
TAAGAACCATTTTGCCCTAAATGTGATGCAGAATTAATATCTGACTCAGAAGACGAATAA
ATTACAAAACCTAAAAATGAGCCTCCACTTTCTAAATCTACTTCTCTATAAAATCAAGGG
GCTAATAGCCAACTGAAATCTTCACCATCAGCAGTAAATAAATCAAGTAGTAGCACTGTA
GGAGCAGCAAGTTCTGCAAATACAACTACTACCACATCATCAATAAATACTAGCGGTTTC
AACTATAATGATCTAGCAAAAGTAAGAGTTATCAAGAAAAATTTAGTATATGTGATTGGT
TTAGCTCCAGAGATAGCCAACGAAGAGACCTTGTTAAAGAAGGAATACTTTAGTTAGTAT
GGAAAAATAACAAAAATAGTTGTTAATACAAATAATGCATACAATCCAAAGGGACCAAAT
GGGCCTTCTTATTCAGCATATATAACATATTCTTCTGAAAGAGAAGCTTCTATGGCTATA
TTAGGAACAGAAGAGTATTAAATAAATGATAGAATAATTAGAGCTTCATATGGTACAACT
AAATATTGCTCTTACTTTTTAAAGTAGTAAGACTGTCCTAATTTACCTGAGTGTTTATAT
CTTCATTCATTTGGAAAAGATAAAGAATTTTTCTAAAAAGACGAAGCAACATCAAATAAA
AATATATTTATTGACCAATAAAAGATGGCTATAAAAAATATACAAAAATATATACCTGAT
CTAGTTAAAATAAAAAATACACCAGTGACATATAATTCTGTACTACCCACTCCATAAAGT
GTAATTGAAAAGTTAATTGAATAAGATGTCTTAGATATAAAACAAAAACCAGCAGAATCA
AATTCAAACGATTAAAAAGGTGATAAAAAGAAAAAAGAAGACAACACTCCTTTGATTGAT
TAGTGGAGTATCGATTTTTCTATTCCTCAAACAGCTCCTAAAAAAGATAAAGAGGATTCA
AAGAAATAGGAATCTTCTTCTCCACAATAAACAGTTAGAAAATAATCTAAATCAATATCT
GAAAAAGATCTCAATACAAATAATACATAACCAACTTCCAAGTCTCCTTAGTAGAATTAG
TAAAGCAGTACACCACCAGAAACATCTTCAAATAAATAACAAGAAGGTGAAAAATCTAAT
AAGATATAATAATCTGCTAATGGTTAGTAATAAAGTGAAGAAAAAGCTTTTTCAAAAGAG
GAGTTCTTAATGAAAGCTATGAATGGAGTTTTATAAAGTCCATCTCGCAGTCACTCTTCT
TCTCTTTCATTACAAAACAACACAAACACAAACTAAACATAGAATTAAAATATTATACAA
AACTCTAACTAAGGGAAACCTTAGTCATAAACTATATAAAATAATAGTTAAACAAACATT
ACAATAAATAATAGCAATTCGAATTCTAATCTATAAAAAGCTGCTAGCTAAGTTGTAGCT
GAGTAAACCAAAAAAGTAGAAAAATCTCCTATAAAAGAATAAATCTAGAAATAAGATGAA
TAAAAAAAAGACGAATAAATAGAAAGTAGAAAGACAGGAAACGCCTCTGCTGGAAGTAGC
AACTAATCTAGTAATGTAGCAAGTACAAATCACTCAAGGACTTCTTCTACTAATTAAAAA
GCATCTGGTTCAAATAGCTATCCTCAAAACTAAGCTTCTAATACAAATGGAATAAATAAT
AAATAAAACTCTGTCACTCAAAATGGAAATCATGCTGAAAAAAAAGAAACAAGCAGAAAA
GAGCAATCAGAAAATAAATATTAAAAACACTAATACATACCTGTAAATCAATAAACCAAG
CAGTCATCGCAATCAGTTGAACCTTAGAAGGAAACTAACTTATAAACTCAAAATGTTACA
TAGCAGCAACAACAATAGAATTAGTAATAGTCCCCTGCACCTCTTGAAAGTTAACCAAAA
TAAAAGGAAGACAACAAATAGGTAAAATCTTCAACTGCTTCTTAGCAAAAGCCTTAAAAC
GGTAGCCAAAATAGCTAATAAACTTAAACATAATAATAAAATCATTAAAACGAACAAGTT
AATATCCTGGCTTAATCTAAGTAGCAAAATACATAAAATGGCTTACAACAATAGGTTTAA
AATAGCTAAAATCATAATATATAAACTTCTCAGCACTAATAGAGCCCTAGTACTTCTACT
AGTAGTAGCAATGTTACTCCTCATAACTCCTCCATACATCCTCATCATTAGCATACAGTT
TCAGAACCTATTGCACCTAAATATATCCTATAAAAAGTAGAAAAAAGAGAAAAAACTTTA
AGCTCTGACAATTAAATTATGAAAAGACTGATTACAAGAACAACACATCAAAAAAGTGCT
TCTTCTCGCTTTGATTTTGCTAAAAACTCTGAAAATAGTGACTAACCTGTTGAAGATGTA
GATGTAATAAATCATATCTTTAATGGACAATATATAATCTTAACAAAGTCATATAATTAG
AGTTCGAATAATTTTGATAAAAATGAGTATTGA

>TTHERM_00444830(protein)
MSAKIKPKQPQKRLQCQYCKEKIENDNYYLCDCGYQYFNQSLQTQECFTKLLQIIQILLV
TKININKFFSYGIRIKREYFQFEVCLIEMCWDCYDDFQDNQEPFCPKCDAELISDSEDEQ
ITKPKNEPPLSKSTSLQNQGANSQLKSSPSAVNKSSSSTVGAASSANTTTTTSSINTSGF
NYNDLAKVRVIKKNLVYVIGLAPEIANEETLLKKEYFSQYGKITKIVVNTNNAYNPKGPN
GPSYSAYITYSSEREASMAILGTEEYQINDRIIRASYGTTKYCSYFLKQQDCPNLPECLY
LHSFGKDKEFFQKDEATSNKNIFIDQQKMAIKNIQKYIPDLVKIKNTPVTYNSVLPTPQS
VIEKLIEQDVLDIKQKPAESNSNDQKGDKKKKEDNTPLIDQWSIDFSIPQTAPKKDKEDS
KKQESSSPQQTVRKQSKSISEKDLNTNNTQPTSKSPQQNQQSSTPPETSSNKQQEGEKSN
KIQQSANGQQQSEEKAFSKEEFLMKAMNGVLQSPSRSHSSSLSLQNNTNTNQTQNQNIIQ
NSNQGKPQSQTIQNNSQTNITINNSNSNSNLQKAASQVVAEQTKKVEKSPIKEQIQKQDE
QKKDEQIESRKTGNASAGSSNQSSNVASTNHSRTSSTNQKASGSNSYPQNQASNTNGINN
KQNSVTQNGNHAEKKETSRKEQSENKYQKHQYIPVNQQTKQSSQSVEPQKETNLQTQNVT
QQQQQQNQQQSPAPLESQPKQKEDNKQVKSSTASQQKPQNGSQNSQQTQTQQQNHQNEQV
NILAQSKQQNTQNGLQQQVQNSQNHNIQTSQHQQSPSTSTSSSNVTPHNSSIHPHHQHTV
SEPIAPKYILQKVEKREKTLSSDNQIMKRLITRTTHQKSASSRFDFAKNSENSDQPVEDV
DVINHIFNGQYIILTKSYNQSSNNFDKNEY

>TTHERM_00444830(gene)
ATGTCAGCAAAGATAAAACCAAAATAACCTCAGAAGAGTACATTTTTTATCAATTTGAGA
TTAATATTATAAAAAAAAGGGCAGCACTGTTAATTTTTAAATGAGCTTCTAAAATGAATT
TATATTTTATTTTCAAAAAGGACGAAAATAGTTAAATTTATTCTAAATTTTTCCCTAAAG
TGAATTAGCAGTCACATTAAATTACATTATCTATAATACATTTTATCCTTTAAGCTTATA
AAATTATTGAAGAAGCATTTTAGTTTGCTTTTAGCTTAATAGACTGACTGACTGCTCTTC
TTTTTTTAAGTTTGCTTTAAAAATATTTTGTTTTTAAATAATTAGGATTGTAGTGTTAAT
ATTGCAAGGAAAAGATAGAAAATGACAATTACTATTTATGCGATTGTGGATATTAAGTAT
TTAAATTGTCTTTAATTTTATTCTTCATCTTTTTCAACAGATTAAACTATTTTAAATGTG
AAATTTTCTGAAAAGCAGTATTTTAATCAATCACTTTAGACATAGGAGTGTTTTACCAAA
TTACTTTAGATTATCCAAATCCTTTTAGTCACTAAAATAAATATCAATAAGTTTTTTTCA
TATGGAATTCGAATAAAAAGAGAGTATTTTCAATTTGAAGTATGTCTGATTGAAGTACAT
ATTTACTCTCTCTCGCGCTAATTCAAATATTAAAAGAAATTCATATTCGAATACTTTTTT
TTTTCATAATTAATTAGATGTGTTGGGATTGTTATGACGATTTTTAAGACAATTAAGAAC
CATTTTGCCCTAAATGTGATGCAGAATTAATATCTGACTCAGAAGACGAGTAAATAAAAT
ATATTAAATTAAATATTAAACTTTATTTGTGATTTTAAATTTAACAGATAGCACAGTAAT
TTTGGATTTACAAATAATTAAATTTATTATTTTTTTACTTATTAGATAAATTACAAAACC
TAAAAATGAGCCTCCACTTTCTAAATCTACTTCTCTATAAAATCAAGGGGCTAATAGCCA
ACTGAAATCTTCACCATCAGCAGTAAATAAATCAAGTAGTAGCACTGTAGGAGCAGCAAG
TTCTGCAAATACAACTACTACCACATCATCAATAAATACTAGCGGTTTCAACTATAATGA
TCTAGCAAAAGTAAGAGTTATCAAGAAAAATTTAGTATATGTGATTGGTTTAGCTCCAGA
GATAGCCAACGAAGAGGTATTTTGCATAAAGAAAATTTTGTATTTTAAAGTTATTAATCT
ATTAAAAATTATATAAATTAGACCTTGTTAAAGAAGGAATACTTTAGTTAGTATGGAAAA
ATAACAAAAATAGTTGTTAATACAAATAATGCATACAATCCAAAGGGACCAAATGGGCCT
TCTTATTCAGCATATATAACATATTCTTCTGAAAGAGAAGCTTCTATGGCTATATTAGTA
TTCAAATTATTTAAAAACTGAGAGTAAAATATTAACATTAAATTGATTATTTTAGGGAAC
AGAAGAGTATTAAATAAATGATAGAATAATTAGAGCTTCATATGGTACAACTAAATATTG
CTCTTACTTTTTAAAGTAGTAAGACTGTCCTAATTTACCTGAGTGTTTATATCTTCATTC
ATTTGGAAAAGATAAAGAATTTTTCTAAAAAGACGAAGCAACATCAAATAAAAATATATT
TATTGACCAATAAAAGATGGCTATAAAAAATATACAAAAATATATACCTGATCTAGTTAA
AATAAAAAATACACCAGTGACATATAATTCTGTACTACCCACTCCATAAAGTGTAATTGA
AAAGTTAATTGAATAAGATGTCTTAGATATAAAACAAAAACCAGCAGAATCAAATTCAAG
TAAAATTTTTAAAATTTAACAAGCAATTACAATTTAATATTTTTTAGACGATTAAAAAGG
TGATAAAAAGAAAAAAGAAGACAACACTCCTTTGATTGATTAGTGGAGTATCGATTTTTC
TATTCCTCAAACAGCTCCTAAAAAAGATAAAGAGGATTCAAAGAAATAGGAATCTTCTTC
TCCACAATAAACAGTTAGAAAATAATCTAAATCAATATCTGAAAAAGATCTCAATACAAA
TAATACATAACCAACTTCCAAGTCTCCTTAGTAGAATTAGTAAAGCAGTACACCACCAGA
AACATCTTCAAGTAGAATTTTTAATTAACAAAAAATTATTTGTACTACTAATCAATAATT
TATTTATTTTATAAAAATAGATAAATAACAAGAAGGTGAAAAATCTAATAAGATATAATA
ATCTGCTAATGGTTAGTAATAAAGTGAAGAAAAAGCTTTTTCAAAAGAGGAGTTCTTAAT
GAAAGCTATGAATGGAGTTTTATAAAGTCCATCTCGCAGTCACTCTTCTTCTCTTTCATT
ACAAAACAACACAAACACAAACTAAACATAGAATTAAAATATTATACAAAACTCTAACTA
AGGGAAACCTTAGTCATAAACTATATAAAATAATAGTTAAACAAACATTACAATAAATAA
TAGCAATTCGAATTCTAATCTATAAAAAGCTGCTAGCTAAGTTGTAGCTGAGTAAACCAA
AAAAGTAGAAAAATCTCCTATAAAAGAATAAATCTAGAAATAAGATGAATAAAAAAAAGA
CGAATAAATAGAAAGTAGAAAGACAGGAAACGCCTCTGCTGGAAGTAGCAACTAATCTAG
TAATGTAGCAAGTACAAATCACTCAAGGACTTCTTCTACTAATTAAAAAGCATCTGGTTC
AAATAGCTATCCTCAAAACTAAGCTTCTAATACAAATGGAATAAATAATAAATAAAACTC
TGTCACTCAAAATGGAAATCATGCTGAAAAAAAAGAAACAAGCAGAAAAGAGCAATCAGA
AAATAAATATTAAAAACACTAATACATACCTGTAAATCAATAAACCAAGCAGTCATCGCA
ATCAGTTGAACCTTAGAAGGAAACTAACTTATAAACTCAAAATGTTACATAGCAGCAACA
ACAATAGAATTAGTAATAGTCCCCTGCACCTCTTGAAAGTTAACCAAAATAAAAGGAAGA
CAACAAATAGGTAAAATCTTCAACTGCTTCTTAGCAAAAGCCTTAAAACGGTAGCCAAAA
TAGCTAATAAACTTAAACATAATAATAAAATCATTAAAACGAACAAGTTAATATCCTGGC
TTAATCTAAGTAGCAAAATACATAAAATGGCTTACAACAATAGGTTTAAAATAGCTAAAA
TCATAATATATAAACTTCTCAGCACTAATAGAGCCCTAGTACTTCTACTAGTAGTAGCAA
TGTTACTCCTCATAACTCCTCCATACATCCTCATCATTAGCATACAGTTTCAGAACCTAT
TGCACCTAAATATATCCTATAAAAAGTAGAAAAAAGAGAAAAAACTTTAAGCTCTGACAA
TTAAATTATGAAAAGACTGATTACAAGAACAACACATCAAAAAAGTGCTTCTTCTCGCTT
TGATTTTGCTAAAAACTCTGAAAATAGTGACTAACCTGTTGAAGATGTAGATGTAATAAA
TCATATCTTTAATGGACAATATATAATCTTAACAAAGTCATATAATTAGAGTTCGAATAG
TAAATTTTATTTCACAAAAAAAAATTTATAATTTTAAAATATTTAAAAAAATAAAAAATA
GATTTTGATAAAAATGAGTATTGA