Identifiers and Description
Gene Model Identifier
TTHERM_00421000Standard Name
RRM18 (RNA Recognition Motif-containing protein 18)Aliases
PreTt07225 | 46.m00280 | 3679.m00130Description
RRM18 RNA-binding family CELF1 RNA recognition motif 3 in CELF/bruno-like protein; RNA recognition motif-containing protein; 2014 reannotation incorporated RRM19 (TTHERM_00421010) into this gene modelGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
No Data fetched for Gene Ontology Annotations
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.2%
TetraMine Data
TTHERM_00421000
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_10974.1 9.997093137033517e-262 hypothetical protein (307 aa)
DictyBase DDB_G0270634 2.9990874792167046e-33 DDB_G0270634 on chromosome: 1
position 3530459 to 3532109
WormBase WBGene00006807 8.999890565246037e-26 locus:unc-75 status:Confirme
d UniProt:G5EE68 protein_i
d:CAB03896.4
Oxytricha Contig18677.0.g10 9.997019043202629e-21 RNA recognition motif_ (a_k_a_
RRM, RBD, or RNP domain)
SGD YER165W 3.001003044337619e-17 PAB1 Poly(A) binding protein,
part of the 3-end RNA-processi
ng complex, mediates interacti
ons between the 5 cap structur
e and the 3 mRNA poly(A) tail,
involved in control of poly(A
) tail length, interacts with
translation factor eIF-4G
Stentor Coeruleus SteCoe_20459 6.305116760146989e-16
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00421000(coding)
ATGAATACCAACGAATACATAGACTAATTCGATTAAAATAAAAATATGGGAGCTTATTAC
GATAGCAATGGTTATGCTATGTAAAACTAGTAATAAATGGATTAAACCTACCAAAACCCT
CAAAACGAAATTAAGGAAGGTGGTGATCTACTTAAAATTAACAATACTTAAATTTTGATC
CGTAGATAGGAAAATACAGTCGATTTAAAACTCTTTGTCGGTTAACTACCAAAGACATGG
GAAAAAGAGCAAGTTAAAGATTTCTTTTCTAAATTCGGCAGAATTTATGAAGTTTAGATT
ATTAGAGACAATAAGGGATAACACAAGGGTTGCGCTTTTGTTAAATTTGCTTCAATGACT
GACGCAGAAAAAGCTATTGAAGCTGTAAAAAACACCACCTTTCCAGGAATGAAGAATAAC
GTTGAAATTAAATGGGCTGACAACGAAGAAGAAAGACTTGGTGTCAACTAAGACTCTGAC
CATAAATTATTTATTGGTTCTCTTCCTAAGTCTTGCACTGAATAAAATATTAAAGATATC
TTTGAATTTTTTGGTGAAATTGAAGAATTACACCTTATGAAGGATAACTAGTAAAACACA
AGATAAGCATTTTTAAAATTCAAACAAAAAGAAAAAGCTCACCTTGCTATCAGAAACTTA
AACTCTCAAGTCTACATCAATGATGCTGAAAATCCAATTGAAGTTAGATTCGCTAAGAAA
TATGTTAAGCAAGAAAAGCCAAATCCTACTCCAGCTCCTAAACCTGACCCTGCTCCTGCT
CCTTAGCAAATCAGCTGGTAAAAAGTATACTTCAAATACTACACTGAAGAGAATGAACCT
TACTACTTCCATCCTCTTCTAAATACTAGTGCCTTTGACAAACCTGGTCCTGGAAGCTTG
ATTTTAGATATTGATGGAAATCAAGAATACATAGATAACAACCCTAGACCTACAAGAAAC
GAACCTGTTGTTATTAATGATAGAAAGGATGTTTATGGCAAAAAGCATGGACCTCCTGGA
GCCAATCTTTTTATATTCCACTTGCCCAATGACTACAGAGATTCCGATTTAGAAAAACTC
TTTTCAGAATATGGTGAGGTAATTTCTGCTAGAGTCAATACAAGACCTGATGGAACAAGC
AAAGGATTTGGTTTCATTAGTTATAACCACCCATCTTAGGCAGAGGCTGCAATCACTGCT
CTCAACGGACTCTAGATTAAAAATAAGAGACTAAAAGTTGAAATAAAAAAAGAAGGAATG
GATAACAATGGAAACATGAAGCAATCCAACCCTGGATCTTTAAACCAAACTTCTTTCCAT
CCATTCTGA>TTHERM_00421000(protein)
MNTNEYIDQFDQNKNMGAYYDSNGYAMQNQQQMDQTYQNPQNEIKEGGDLLKINNTQILI
RRQENTVDLKLFVGQLPKTWEKEQVKDFFSKFGRIYEVQIIRDNKGQHKGCAFVKFASMT
DAEKAIEAVKNTTFPGMKNNVEIKWADNEEERLGVNQDSDHKLFIGSLPKSCTEQNIKDI
FEFFGEIEELHLMKDNQQNTRQAFLKFKQKEKAHLAIRNLNSQVYINDAENPIEVRFAKK
YVKQEKPNPTPAPKPDPAPAPQQISWQKVYFKYYTEENEPYYFHPLLNTSAFDKPGPGSL
ILDIDGNQEYIDNNPRPTRNEPVVINDRKDVYGKKHGPPGANLFIFHLPNDYRDSDLEKL
FSEYGEVISARVNTRPDGTSKGFGFISYNHPSQAEAAITALNGLQIKNKRLKVEIKKEGM
DNNGNMKQSNPGSLNQTSFHPF>TTHERM_00421000(gene)
ATGAATACCAACGAATACATAGACTAATTCGATTGTAAATAATGAAATTAAAAAAAAATT
TCTAACTTTAATTTACTTAACCTATGAGGAGAATTATCTTAAATATGTTTTATAATTATC
AAATTACATAGAAAATAAAAATATGGGAGCTTATTACGATAGCAATGGTTATGCTATGTA
AAACTAGTAATAAATGGATTAAACCTACCAAAACCCTCAAAACGAAATTAAGGAAGGTGG
TGATCTACTTAAAATTAACAATGTAAATTACTTAGCACTTTAATTTCTCTTTATTTATTT
TAATGGACTGTATGATAGAATTATAATAACACACACACACATTAAAATCTTAATAAGAAA
AAAATAATGATCATATAGACCATCTTACAAATAAAAAACTGAGAATAATTTTATTATTTT
TAATTAAATAGACTTAAATTTTGATCCGTAGATAGGAAAATACAGTCGATTTAAAACTCT
TTGTCGGTTAACTACCAAAGACATGGTAAAAATAAAATTAGTAAAAGTTAAGTATTTATT
GACTCAATTTTTAAATAGGGAAAAAGAGCAAGTTAAAGATTTCTTTTCTAAATTCGGCAG
AATTTATGAAGTTTAGATTATTAGAGACAATAAGGGATAACACAAGGGTTGCGCTTTTGT
TAAATTTGCTTCAATGACTGACGCAGAAAAAGCTATTGAAGCTGTAAAAAACACCACCTT
TCCAGGAGTAAATATTAATAAAATAGATTTTTAGACAAATTTATTTATTCTTATAAAATT
AACTAGCAATATATATCTATCTATCTATACATTTATACATCTATTAATTCATTAATTTCT
TAATTAATTTTCTTTTAAATTTTTAATTTCATTAGATGAAGAATAACGTTGAAATTAAAT
GGGCTGACAACGAAGAAGAAAGACTTGGTGTCAACTAAGACTCTGACCATAAATTATTTA
TTGGTTCTCTTCCTAAGTCTTGCACTGAAGTAATAAAATTTAGGACTAAGATTTAAGGTT
TTTAAATATAATATTTTAATAGTAAAATATTAAAGATATCTTTGAATTTTTTGGTGAAAT
TGAAGAATTACACCTTATGAAGGATAACTAGTAAAACACAAGATAAGCATTTTTAAAATT
CAAACAAAAAGAAAAAGCTCACCTTGCTATCAGAAACTTAAACTCTCAAGTCTACATCAA
TGATGCTGAAAATCCAATTGAAGTTAGATTCGCTAAGAAATATGTTAAGCAAGAAAAGCC
AGTAAAATTTTTTATTTAAAATATTTTTTATTTTAGTGATCAAAGCGGCTTAAAGATTGC
CGAATAAGGGTGGGTTTGATTGATCATGTGAAAAGGTAAGTTAAAAAAAAGTAATAAGGA
AATTTTATTTGTTTATTGATGGATAAAATTGGTTAGCCTTGTGAAATTCTAAATCTAAGT
TCTAGATAGATAAATGATCAATCTTTGAATCATAATAAGATAACTAAAAGTGAGGGCATC
ATTAATAACAATCAATCAAGCAAGTAAGCAGCAAGCAAACAAAAAAAAACACAACAGAAA
ATAGAATCAAAGTCTAACATTAGAAAGAAAGAAATCAAATTAACAAAATAACTAAGTAAC
TAAGTTACTAACTAACTAACTAACTAACTAATTAACTAATAACAATCAAACAACTGATCA
ACCAAAAAATTAGAGAGGATGAAGTAGATTGAAACGAAAAAGAGATGAATCTCGTCTTAT
TAGAAATAAAATAAAAGCAAGTTATCTATAATTAATAGAATAAATTAATAAATAATTAAA
ATATTATTATGAGTAAGTAGTCTACATAATCTAATAGTAAGTATGTGATCGCATGTATCG
TGTAAATTAATGTTGTAGTTGTTGTTTAAATAATAAAATAGTAATAAATTATGTTGTTGT
TATTGATGTTCCATCTTGTTATAATTACTTAAAAGCTAAATTATCAAAATCCCTGTTTAC
TAACAAACAAACAAACTAATTAACTAATAAGATCATATATCATCTATCTATCTATCTCAA
TCAATCATAAACAAACTACTTAAACACATGCATCAATCGATTTGTCTAATAGTTATATAT
TATCTATTCAACAAAAAAAAAATAAAAGCAATTTTACAGCTTTTCAAACCAATTCTTTTA
ATATTTTCATTTATCAAACTAAATTTAAAATTCAAAAATAAATAAAAACTTTATTTTTTT
AAATACAGAATCCTACTCCAGCTCCTAAACCTGACCCTGCTCCTGCTCCTTAGCAAATCA
GCGTAAGGATATTTAATCAAAAAATTTAATTTTTAAGTTTTAAAATTTAAAATTTAGTGG
TAAAAAGTATACTTCAAATACTACACTGAAGAGAATGAACCTTACTACTTCCATCCTCTT
CTAAATACTAGTGCCTTTGACAAACCTGGTCCTGGAAGCTTGATTTTAGATATTGATGGA
AATCAAGAATACATAGATAACAACCCTAGACCTACAAGAAACGAACCTGTTGTTATTAAT
GATAGAAAGGATGTTTGTAAATATATTTCAAAATTTTAAATTAATAAAATAAAAATTAAA
AAATTAATTCACTTCCTAAAATAAAACATTTCATTTTTTATTTTTTTTAAACTTACTTTT
TAAACTAAATATTAAATTATTTTTATTAAAATAGATGGTAAAATATTATTTAGATGATTC
TGATTGCACAACATAGTTTTTATTTACAAGCTAATTATCTAAATCATTTATTTTACTTTT
TTCTATTAAAATTAATAGATGGCAAAAAGCATGGACCTCCTGGAGCCAATCTTTTTATAT
TCCACTTGCCCAATGACTACAGAGATTCCGATTTAGAAAAACTCTTTTCAGAATATGGTG
AGGTAATTTCTGCTAGAGTCAATACAAGACCTGATGGAACAAGCAAAGGATTTGGTAAAT
ATTGAAGCTCTTTAAGTTAATTTTTAATGCTTAAATTATTTTAGGTTTCATTAGTTATAA
CCACCCATCTTAGGCAGAGGCTGCAATCACTGCTCTCAACGGACTCTAGATTAAAAGTAA
ATAAAATATTAGAGTAAATATAAAATATAAATAAATTTTAATATAAATAGATAAGAGACT
AAAAGTTGAAATAAAAAAAGAAGGAATGGATAACAATGGAAACATGAAGCAATCCAACCC
TGGATCTTTAAACCAAACTTCTTTCCATCCATTCTGA