Identifiers and Description

Gene Model Identifier

TTHERM_00384810

Standard Name

RRM13 (RNA Recognition Motif-containing protein 13)

Aliases

PreTt24773 | 41.m00180

Description

RNA recognition motif-containing protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF00076 ) RNA recognition motif. (a.k.a. RRM,

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: Yes
Presense Probability: 72.5%

TetraMine Data

TTHERM_00384810

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Oxytricha	Contig6671.0.g58	7.002638123733849e-21	RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
SGD	YNL175C	3.001003044337619e-17	NOP13 Nucleolar protein found in preribosomal complexes; con tains an RNA recognition motif (RRM)
WormBase	WBGene00003902	9.001232279470736e-16	locus:pab-1 status:Confirmed UniProt:Q9U302 protein_id :CAA21572.1
Tetrahymena borealis	EI9_01741.1	0.000000000000001999258566166494	hypothetical protein (295 aa)
DictyBase	DDB_G0275459	0.000000000000008002679274403579	DDB_G0275459 on chromosome: 2 position 6113524 to 6114624
Stentor Coeruleus	SteCoe_35142	0.0000000000018795288165390832

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00384810(coding)
ATGATAAGTATTTTAATTTGGCTTTTATTTTAGCTAGATACATATCTAGGCAATATTACT
CCTGATGAGACTGAATAAAACTTTAAATTTTCTAACGAAGTTATTGTTAAAGGTTTGAGC
TTCGATGCTAATGAAAACGATATTAGTAACTACTTTGACCAAAAATGTGGTCAAGTTTCT
AAAGTTAAACTCTTAATGAACTCATAAGGACGTTCGAAGGGTATTGCATTTGTCAGTTTT
GAAACTGAAGAGGGGTATAATAAAGCTCTTGAAATGAATAACTCAGAATTTATGGGTAGA
TATCTTATCATTGAAAAGACTAAGTCTAAGGCTGAAAGGTTAACTCAGATGCATTCTTAT
GCTGATTAAGGTCCTAAAATTGTGATTGTTGATAATATCTCTTCAAAAATTAATAAGTTC
GATAATGAAGTTATTGTTAAGGGTTTGAGCTTTGATGCAGATGAAAATGATATTGGTAAC
TACTTAAACGAAAACTGTGGTTCCGTTACTAGAGTTAACCTCTTAAAGAATGAATAAGGA
TGTTCTAAAGGTGTTGCCTTCGTCAGCTTTGAAACTGAAGAAGGTTGCAACAAGGCTGTT
GAATTGAGCGACTCTGAATTCATGGGTAGATAAATTTTTATTGAAAAGACCAAGCCAAAA
ATTGAAAGACCTGCTCAATTACCTGCTGATCAAGACTCCAAGACTATCTTTGTTGGTAAC
CTCTCTTTCGTAACAAATAAGGAAACTCTTAAGAAGTTCTTCGCCTCTTGTGGCAAGGTT
GTTAATGCTCGTATCGCTGAAGCTGAAGGAAAGAGCAGAGGTTTCGGTCACGTTGAATTC
GAAGAAAGATCTGGTGTTGAAAATGCTTTAAAGATGGCTGGTGAATAAATCGACGGAAGA
CCCATCAGGGTTGATGTCGCTGCTTCCAGAGGTAAACTTGTAGGTTTCAACAGAATCTAA
TGA

>TTHERM_00384810(protein)
MISILIWLLFQLDTYLGNITPDETEQNFKFSNEVIVKGLSFDANENDISNYFDQKCGQVS
KVKLLMNSQGRSKGIAFVSFETEEGYNKALEMNNSEFMGRYLIIEKTKSKAERLTQMHSY
ADQGPKIVIVDNISSKINKFDNEVIVKGLSFDADENDIGNYLNENCGSVTRVNLLKNEQG
CSKGVAFVSFETEEGCNKAVELSDSEFMGRQIFIEKTKPKIERPAQLPADQDSKTIFVGN
LSFVTNKETLKKFFASCGKVVNARIAEAEGKSRGFGHVEFEERSGVENALKMAGEQIDGR
PIRVDVAASRGKLVGFNRIQ

>TTHERM_00384810(gene)
ATGATAAGTATTTTAATTTGGCTTTTATTTTAGCTAGATACATATCTAGGCAATATTACT
CCTGATGAGACTGAATAAAACTTTAAATTTTCTAACGAAGTTATTGTTAAAGGTTTGAGC
TTCGATGCTAATGAAAACGATATTAGTAACTACTTTGACCAAAAATGTGGTCAAGTTTCT
AAAGTTAAACTCTTAATGAACTCATAAGGACGTTCGAAGGGTATTGCATTTGTCAGTTTT
GAAACTGAAGAGGGGTATAATAAAGCTCTTGAAATGAATAACTCAGAATTTATGGGTAGA
TATCTTATCATTGAAAAGACTAAGTCTAAGGCTGAAAGGTTAACTCAGATGCATTCTTAT
GCTGATTAAGGTCCTAAAATTGTGATTGTTGATAATATCTCTTCAAAAATTAATAAGTTC
GATAATGAAGTTATTGTTAAGGGTTTGAGCTTTGATGCAGATGAAAATGATATTGGTAAC
TACTTAAACGAAAACTGTGGTTCCGTTACTAGAGTTAACCTCTTAAAGAATGAATAAGGA
TGTTCTAAAGGTGTTGCCTTCGTCAGCTTTGAAACTGAAGAAGGTTGCAACAAGGCTGTT
GAATTGAGCGACTCTGAATTCATGGGTAGATAAATTTTTATTGAAAAGACCAAGCCAAAA
ATTGAAAGACCTGCTCAATTACCTGCTGATCAAGACTCCAAGACTATCTTTGTTGGTAAC
CTCTCTTTCGTAACAAATAAGGAAACTCTTAAGAAGTTCTTCGCCTCTTGTGGCAAGGTT
GTTAATGCTCGTATCGCTGAAGCTGAAGGAAAGGTATCTAACCAATTTAAATACATATTT
ATTAAAATTTTTTCTGAAAATTTGATGGGGTATAGCTTACTTATAATTTATTTTAGGGAA
ATATTTTATTTAAAATTAGTAAGTAGATAAAAGTTTTTATTATGAACATACTACACTTAT
TAGAATTAGTAGGAGTTTACAATATGATGATATAAATAATTAATTACAAATAAAAATATA
AATTGATTAATAATAGTATTTTTGTTAATAGATAAAAATAACAAAAAATAAAATAAAACT
TCCTAATTTAGTTAGAAATGAATAAGTAAAATTGCTAAGTTTCCCTGAATCACTAAGATA
ATAAATAAATAATTACATGATAACTTTTAATTTTATTCAAATTTTAAATATAATTTTTAA
AAATGTAGAGCAGAGGTTTCGGTCACGTTGAATTCGAAGAAAGATCTGGTGTTGAAAATG
CTTTAAAGATGGCTGGTGAATAAATCGACGGAAGACCCATCAGGGTTGATGTCGCTGCTT
CCAGAGGTAAACTTGTAGGTTTCAACAGAATCTAATGA