Identifiers and Description
Gene Model Identifier
TTHERM_00348880
Standard Name
RRM11 (RNA Recognition Motif-containing protein 11)
Aliases
PreTt05300 | 36.m00264 | 3703.m00126
Description
RRM11 RNA recognition motif protein
Genome Browser (Macronucleus)
Genome Browser (Micronucleus)
Gene Ontology Annotations
No Data fetched for Gene Ontology Annotations
Domains
( TIGR01661 ) ELAV/HuD family splicing factor
( TIGR01622 ) splicing factor, CC1-like family
( TIGR01659 ) sex-lethal family splicing factor
( PF00076 ) RNA recognition motif. (a.k.a. RRM,
( TIGR01642 ) U2 snRNP auxilliary factor, large
( TIGR01628 ) polyadenylate binding protein, human types
Gene Expression Profile
Tetrahymena Functional Genomics Database:
Change in Gene Expression
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.2%
TetraMine Data
TTHERM_00348880
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description
Tetrahymena borealis EI9_09792.1 9.997093137033517e-262 hypothetical protein (479 aa)
WormBase WBGene00003902 1.000116773704384e-19 locus:pab-1 status:Confirmed
UniProt:Q9U302 protein_id
:CAA21572.1
Oxytricha Contig18677.0.g10 2.000769134519826e-18 RNA recognition motif_ (a_k_a_
RRM, RBD, or RNP domain)
DictyBase DDB_G0291486 5.998633383648922e-18 DDB_G0291486 on chromosome: 6
position 413873 to 415521
SGD YER165W 0.000000000000008002679274403579 PAB1 Poly(A) binding protein,
part of the 3-end RNA-processi
ng complex, mediates interacti
ons between the 5 cap structur
e and the 3 mRNA poly(A) tail,
involved in control of poly(A
) tail length, interacts with
translation factor eIF-4G
Stentor Coeruleus SteCoe_14690 0.00000000003775134544279098
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00348880(coding)ATG AAT ATA AAT TGT CAG TAG TAA GAA GAA AGT TCT TTC GAA ATA GAT TAT AGA TTT TAG AAT GAT TTG ATT TCA TTT GAA AAT CTC ATA TCG AAT TTC AAC TAA AGT AAG CAA ACT AAA GAC AAC ATT GAA GTA GAT TTT GAT AGC TTG CAA GAG CAG ACT AAT TAG CTT ATG CTA CTT CTA CAA AAA TCA GCT AAT AAC AAT AAA TCA ATT CAA AAT AAA TAA AAT GAT GAG TTA ACT AAT TTT GTA ATA GAT ATT TAG ATG GTT TTT AAT TCA ATT CCT ATT AAA TTA TTT ATT GGG CAA GTT CCT AAG GAT TGG TAG GAA AGT GAT CTT AAG ATT TTT TTT GAA AAA CAT ACC AGT ATC ACA TAA ATT GAA GTA ATA AGA GAC TAA AAA TTT AGA CAT TAG GGA TGC GCT TTT GCT ACT TTT TCC TCA ATG TCT GAA GCA GAA AAA GTT ATT GAA TTC TAC AAA AAT AAA CAT TTT CCA AAC AGT AAG TAG GAA ATT ATT ATG AAG TGG GCT TCT GGA GAA GAA GAA AGA CTC GGA GTC AGC GAG AAT TCA AGT CAT AAG CTA ATT ATA AAA AAT CTT CCT GCT TTA ATA TCA GAT GCA AGT ATT TCT AAT ATA TTT GAT AAT TTT GGT AGA ATC TAA TAA TTA AAA GTC ATA CGA GAT AAA AAA ACA AGT GAA TGC AAA GGT CAT GCG TTT ATT AAA TAT TAT GAG AAA GAG AGT GCC CAT TTA GCT GTC TAG AAC TTG AAC AAA TAA AAT ATT TAC CTA ATT TAA AAT AAA AAA TTG AAA GTT TCT TTT ATA GAA AAG AGT TAT TAA AAA AAG CAA AAG TAA ATT CTA AAA TAT ATG AAA CAA AAT ACA AAT CAA ATA ACA TAA AAT GGC CCT CTG CCT TCT ACA ATA CCT TTT GAG AAG TAT TAT TAT GAA TAT TTT AAT TAA GGG GAA TCT AAT CCT ATA TTT TAC CAT CCA TTT ACA GAT ACT TCT TCT ACT GAA ACT CCT CCT TAC TCC TCA TTA ATC TGG CAC GAA GAT GGT TCT TGC ACA ATT ACA CCT AAA CTT TTT CCC TGC CAT ATA GAT TTT ACA ATG TAA AAT AAA AGA AAA GAT GGT ATT AAA AAA TAT ACA AAT CAA AAA TAT GTT GTT TAA GGT CCT TCA CAC TCT AAT ATT TTT GTC TTT CAT CTA CCT AAA TAA TAT AAT GAA AAA AAC TTA TTT GAG CTA TTT TCA GGT TAT GGA AAT ATC ATT TCA ATA ACT ATT TGT AGA AAA TAA AAT GGT GAA AGC CGA GGT TAT GGA TTT GTT AGT TTT AAC TAG CCT TAT GAG GCA GCT CAT GCA ATA AAA GAA TTA AAT GGT TTA AAT TTG ATG GGA AAA AGA ATA AAA GTA GAA CTA AAA TAA ACC CAT ATT GAA AAA GTA AAT AGC AAT CAA AAA ACA CTA AAC TAT GAA TGA >TTHERM_00348880(protein)M N I N C Q Q Q E E S S F E I D Y R F Q N D L I S F E N L I S N F N Q S K Q T K D N I E V D F D S L Q E Q T N Q L M L L L Q K S A N N N K S I Q N K Q N D E L T N F V I D I Q M V F N S I P I K L F I G Q V P K D W Q E S D L K I F F E K H T S I T Q I E V I R D Q K F R H Q G C A F A T F S S M S E A E K V I E F Y K N K H F P N S K Q E I I M K W A S G E E E R L G V S E N S S H K L I I K N L P A L I S D A S I S N I F D N F G R I Q Q L K V I R D K K T S E C K G H A F I K Y Y E K E S A H L A V Q N L N K Q N I Y L I Q N K K L K V S F I E K S Y Q K K Q K Q I L K Y M K Q N T N Q I T Q N G P L P S T I P F E K Y Y Y E Y F N Q G E S N P I F Y H P F T D T S S T E T P P Y S S L I W H E D G S C T I T P K L F P C H I D F T M Q N K R K D G I K K Y T N Q K Y V V Q G P S H S N I F V F H L P K Q Y N E K N L F E L F S G Y G N I I S I T I C R K Q N G E S R G Y G F V S F N Q P Y E A A H A I K E L N G L N L M G K R I K V E L K Q T H I E K V N S N Q K T L N Y E >TTHERM_00348880(gene)ATG AAT ATA AAT TGT CAG TAG TAA GAA GAA AGT TCT TTC GAA ATA GAT TAT AGA TTT TAG AAT GAT TTG ATT TCA TTT GAA AAT CTC ATA TCG AAT TTC AAC TAA AGT AAG CAA ACT AAA GAC AAC ATT GAA GTA GAT TTT GAT AGC TTG CAA GAG CAG ACT AAT TAG CTT ATG CTA CTT CTA CAA AAA TCA GCT AAT AAC AAT AAA TCA ATT CAA AAT AAA TAA AAT GAT GAG TTA ACT AAT TTT GTA ATA GAT ATT TAG ATG GTT TTT AAT TCA ATT CCT ATT AAA TTA TTT ATT GGG CAA GTT CCT AAG GAT TGG TAG GAA AGT GAT CTT AAG ATT TTT TTT GAA AAA CAT ACC AGT ATC ACA TAA ATT GAA GTA ATA AGA GAC TAA AAA TTT AGA CAT TAG GGA TGC GCT TTT GCT ACT TTT TCC TCA ATG TCT GAA GCA GAA AAA GTT ATT GAA TTC TAC AAA AAT AAA CAT TTT CCA AAC AGT AAG TAG GAA ATT ATT ATG AAG TGG GCT TCT GGA GAA GAA GAA AGA CTC GGA GTC AGC GAG AAT TCA AGT CAT AAG CTA ATT ATA AAA AAT CTT CCT GCT TTA ATA TCA GAT GCA AGT ATT TCT AAT ATA TTT GAT AAT TTT GGT AGA ATC TAA TAA TTA AAA GTC ATA CGA GAT AAA AAA ACA AGT GAA TGC AAA GGT CAT GCG TTT ATT AAA TAT TAT GAG AAA GAG AGT GCC CAT TTA GCT GTC TAG AAC TTG AAC AAA TAA AAT ATT TAC CTA ATT TAA AAT AAA AAA TTG AAA GTT TCT TTT ATA GAA AAG AGT TAT TAA AAA AAG CAA AAG TAA ATT CTA AAA TAT ATG AAA CAA AAT ACA AAT CAA ATA ACA TAA AAT GGC CCT CTG CCT TCT ACA ATA CCT TTT GAG AAG TAT TAT TAT GAA TAT TTT AAT TAA GGG GAA TCT AAT CCT ATA TTT TAC CAT CCA TTT ACA GAT ACT TCT TCT ACT GAA ACT CCT CCT TAC TCC TCA TTA ATC TGG CAC GAA GAT GGT TCT TGC ACA ATT ACA CCT AAA CTT TTT CCC TGC CAT ATA GAT TTT ACA ATG TAA AAT AAA AGA AAA GAT GGT ATT AAA AAA TAT ACA AAT CAA AAA TAT GTT GTT TAA GGT CCT TCA CAC TCT AAT ATT TTT GTC TTT CAT CTA CCT AAA TAA TAT AAT GAA AAA AAC TTA TTT GAG CTA TTT TCA GGT TAT GGA AAT ATC ATT TCA ATA ACT ATT TGT AGA AAA TAA AAT GGT GAA AGC CGA GGT TAT GGA TTT GTT AGT TTT AAC TAG CCT TAT GAG GCA GCT CAT GCA ATA AAA GAA TTA AAT GGT TTA AAT TTG ATG GGA AAA AGA ATA AAA GTA GAA CTA AAA TAA ACC CAT ATT GAA AAA GTA AAT AGC AAT CAA AAA ACA CTA AAC TAT GAA TGA