Identifiers and Description

Gene Model Identifier

TTHERM_00318730

Standard Name

RRM10 (RNA Recognition Motif-containing protein 10)

Aliases

PreTt21074 | 31.m00376 | 3687.m00177

Description

RNA recognition motif-containing protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF02178 ) AT hook motif
• ( PF06495 ) Fruit fly transformer protein
• ( TIGR01622 ) splicing factor, CC1-like family
• ( PF00076 ) RNA recognition motif. (a.k.a. RRM,
• ( TIGR01642 ) U2 snRNP auxilliary factor, large

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 30.6%

TetraMine Data

TTHERM_00318730

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_40998.1	1.999658401959794e-176	hypothetical protein (367 aa)
Oxytricha	Contig5669.0.0.g96	9.996273942859018e-26	RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
WormBase	WBGene00006697	7.000924640675686e-24	locus:uaf-1 Splicing factor U2AF 65 kDa subunit status:C onfirmed UniProt:P90978 pr otein_id:CCD62280.1
Stentor Coeruleus	SteCoe_31965	4.248354255291589e-18
DictyBase	DDB_G0286395	0.000000004999139696582238	u2af2 on chromosome: 4 positio n 4405482 to 4407497

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00318730(coding)
ATGTATTTTAATTTGTTTAAACTTTATTTGCTTACTTTAAGTAATTTTTTATTTTTATAA
AATGAATTATTAGTTTTTTTGTTAAAAAAGGCTTATAGACATATAGTTTTATAAGATATT
TACTATTTATTATTCAATTCTAATAAAGATATATCTATCAGTCAATCAATCAAATATAAT
CAATTAATCTTAAAAACCTTTCTTCAATCTAAATTTGTTGAATTAGATAGCTAGCTATAT
ATAAATAGGATTGATTAAAAATAAATGAGTTCAAGCAGAGAGAGAAAAAGATCAGATTCT
AGATCTAAAAAGGACAAAAAAGACAAGAAAGATAAAAAGGAGAAAAAGGACAAGAAAGAT
AAGAAAGAGCATAAAGAACATAAAGAAAGAAGAGACTCAAGGGAAAAAAAGTCTAAAAAA
GAATCAAAAGACCGTAGAGATAGAAAAGAAAGTAGGGATAGAGAAGAAAAGAAGGATAAA
AAAGATAAAAAGGATAAAAAGAAAAGAGATAAATCTGAAGATAGAAAAAGGAGAAGTAAC
TCTTATCATTAAAAAAGAAAAAGGTCTTCTACTAAGAGTAGCTCTAGAGGCAGAAAAAGA
TCTCAGCCTTAAAGAGGGTAAAATTTTGGATTTGCGTTTGATAGTCCTCCAAAAGAAATC
ACATAGAAAGAAGAACCTGCATAAAGTTAAGAAGTCGTTAATGACTTTTCAAATGTCATA
AACAATCCTAATTTTAATCCTAAGTTCAAAGAATTATTTATGAAGTTATAGAATAGCAAA
CTGCCTGATTTATAAAATTCAAAGTGCGATAGAAAACTTTATATAGGAAATATTCCTCCT
GGTTTATAGCCAGTTAAATGTTAATTGATGATCAACAGTGCTCTAAAGCAACTCAAAGTC
AATTAAGAAACGCCTGGTGATTCTTGCGTCAGTATATGGATAAGTCCAGAAGGGAATTAT
GGTTTTGCAGAGTTTAGAACACCTGACGAAGCAACAAAAGCTCTTAATGCATTAGTTAAT
GTAACATTATTGGGATAACCATTAAAGGTAGGGAGACCTGCACAATATACAAAATCTTCA
ACTGAAGTTTCATCAAGTGGAGCCAATTCTGGTGCAACTGGTTTTTCTTCAAGTGGTCGT
TTTGATATTCTTAGTTTGTTAGATCCTAATGGCTAAAAAAAGGACTAAGAAGAAGCTGAA
GGTGCATAATAAGCTGCAAATTTAACTTTGATCCCAGGATTAGAGGCTGCTCCACCTGTA
ACAAATAAAAATATGATAAGTTTAAAAGTGTAAATACCAACTAGAATCCTTGTTTTACAC
AATATGATTGCAGATGGTGAATTAATTATTGATGAAGAATTCAGATAAATAGAAGAAGAT
GTAAAAGAAGAATGTTCAAAGCATGGTAAAGTAGTAAAAATAACTATTCCAAGACCTAGC
GATTCAAATGAATAAGTAAAAGGCTAAGGCCGTATTTTTGTAGAATATGAAAATACTGAT
GCAGCAAGAGATGCAAGAAGAGATCTAAATGGTAGATTATTTAACAATAGAACTGTTCAA
GTATAATACTTCAGCGAGCAAAAATATTTAGATGGGGAACTGGATTTTAGAATAAGATGA

>TTHERM_00318730(protein)
MYFNLFKLYLLTLSNFLFLQNELLVFLLKKAYRHIVLQDIYYLLFNSNKDISISQSIKYN
QLILKTFLQSKFVELDSQLYINRIDQKQMSSSRERKRSDSRSKKDKKDKKDKKEKKDKKD
KKEHKEHKERRDSREKKSKKESKDRRDRKESRDREEKKDKKDKKDKKKRDKSEDRKRRSN
SYHQKRKRSSTKSSSRGRKRSQPQRGQNFGFAFDSPPKEITQKEEPAQSQEVVNDFSNVI
NNPNFNPKFKELFMKLQNSKLPDLQNSKCDRKLYIGNIPPGLQPVKCQLMINSALKQLKV
NQETPGDSCVSIWISPEGNYGFAEFRTPDEATKALNALVNVTLLGQPLKVGRPAQYTKSS
TEVSSSGANSGATGFSSSGRFDILSLLDPNGQKKDQEEAEGAQQAANLTLIPGLEAAPPV
TNKNMISLKVQIPTRILVLHNMIADGELIIDEEFRQIEEDVKEECSKHGKVVKITIPRPS
DSNEQVKGQGRIFVEYENTDAARDARRDLNGRLFNNRTVQVQYFSEQKYLDGELDFRIR

>TTHERM_00318730(gene)
ATGTATTTTAATTTGTTTAAACTTTATTTGCTTACTTTAAGTAATTTTTTATTTTTATAA
AATGAATTATTAGTTTTTTTGTTAAAAAAGGCTTATAGACATATAGTTTTATAAGATATT
TACTATTTATTATTCAATTCTAATAAAGATATATCTATCAGTCAATCAATCAAATATAAT
CAATTAATCTTAAAAACCTTTCTTCAATCTAAATTTGTTGAATTAGATAGCTAGCTATAT
ATAAATAGGATTGATTAAAAATAAATGAGTTCAAGCAGAGAGAGAAAAAGATCAGAGTAA
ACTTATTTGCATGATCAAAAATAATTAAGCATGGAATTAAAAACCATTTTATAAAGTTCT
AGATCTAAAAAGGACAAAAAAGACAAGAAAGATAAAAAGGAGAAAAAGGACAAGAAAGAT
AAGAAAGAGCATAAAGAACATAAAGAAAGAAGAGACTCAAGGGAAAAAAAGTCTAAAAAA
GAATCAAAAGACCGTAGAGATAGAAAAGAAAGTAGGGATAGAGAAGAAAAGAAGGATAAA
AAAGATAAAAAGGATAAAAAGAAAAGGTAAATTTTAAATTATTATGAAATAGTGCTCATG
ATTTTATATCAATAATAGAGATAAATCTGAAGATAGAAAAAGGAGAAGTAACTCTTATCA
TTAAAAAAGGTAATCACTTAGCAATAAATAAGCTTTGAGCAATTAGCAGTAAAATTTTAT
TTAAAGAAAAAGGTCTTCTACTAAGAGTAGCTCTAGAGGCAGAAAAAGATCTCAGCCTTA
AAGAGGGTACTTATTAAAAAATAGTAAATTAGGTTTTATCATAAAATATTTTCAATATAT
TCAATAGGTAAAATTTTGGATTTGCGTTTGATAGTCCTCCAAAAGAAATCACATAGAAAG
AAGAACCTGCATAAAGTTAAGAAGTCGTTAATGACTTTTCAAATGTCATAAACAATCCTA
ATTTTAATCCTAAGTTCAAAGAATTATTTATGAAGTTATAGAATAGCAAACTGCCTGATT
TATAAAATTCAAAGTGCGATAGAAAACTTTATATAGGAAATATTCCTCCTGGTTTATAGC
CAGTTAAAGTAATTTCTAAAAACAAAAATATTTTCAAATATTAAAATATTTAAAAAATTA
GTGTTAATTGATGATCAACAGTGCTCTAAAGCAACTCAAAGTCAATTAAGAAGTAATTAA
TTAATTAATTTATATAAATTAATAGATTAAATTATATATTTTTATTTTAAAATACTTAGA
CGGTAAATTTAAGTTCTTCACACAGAATTCATAAGTTCTTTAAAATTAAGTTTATTAAAT
TTAATTTTTATATATTAGCCTGGTGATTCTTGCGTCAGTATATGGATAAGTCCAGAAGGT
ACCTTCTTTTCTTTTCTTTAATTATTAATATTAAAGATTTTCTTTAATTGAAGTTAATTT
ATTTAATTTAAGGGAATTATGGTTTTGCAGAGTTTAGAACACCTGACGAAGCAACAAAAG
CTCTTAATGCATTAGTTAATGTAACATTATTGGGATAACCATTAAAGGTAGGGAGACCTG
CACAATATACAAAATCTTCAACTGAAGTTTCATCAAGTGGAGGTGATTAAATTTTACATT
TTCTATCTAGAATATTAATTCAATTTTTTATATTTTAGCCAATTCTGGTGCAACTGGTTT
TTCTTCAAGTGGTCGTTTTGATATTCTTAGTTTGTTAGATCCTAATGGTAAAAACAATAA
AAAATTTATTTTTATTTATGCTTAAGTATTTATTTATTTTTCTTTAGGCTAAAAAAAGGA
CTAAGAAGAAGCTGAAGGTGCATAATAAGCTGCAAATTTAACTTTGATCCCAGGATTAGA
GGCTGCTCCACCTGTAACAAATAAAAATGTAAAATATTAATTAGATTGGAAATTATGATG
GTATTAATTAAAAAAAAAATTAGATGATAAGTTTAAAAGTGTAAATACCAACTAGAATCC
TTGTTTTACACAATATGATTGCAGATGGTGAATTAATTATTGATGAAGAATTCAGATAAA
TAGAAGAAGATGTAAAAGAAGAATGTTCAAAGCATGGTAAAGTAGTAAAAATAACTATTC
CAAGACCTAGCGATTCAAATGAATAAGTAAAAGGCTAAGGCCGTATTTTTGTAGAATATG
AAAATACTGATGCAGCAAGAGATGCAAGAAGAGTAAAAAAAACAATTTATATATTTAATC
TATTTTTCAACTAATATTTTTTTAAAAAAGGATCTAAATGGTAGATTATTTAACAATAGA
ACTGTTCAAGTATAATACTTCAGCGAGCAAAAATATTTAGATGGGGAACTGGATTTTAGA
ATAAGATGA