Identifiers and Description
Gene Model Identifier
TTHERM_00101140Standard Name
RRM1 (RNA Recognition Motif-containing protein 1)Aliases
PreTt22913 | 7.m00362Description
RRM1 splicing factorGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
No Data fetched for Gene Ontology Annotations
Domains
- ( PF00076 ) RNA recognition motif. (a.k.a. RRM,
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 19%
TetraMine Data
TTHERM_00101140
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_00288.1 4.00060640795776e-64 splicing factor, CC1-like fami
ly protein (548 aa)
Oxytricha Contig10134.0.g98 0.00000000002000577768187062 RNA recognition motif_ (a_k_a_
RRM, RBD, or RNP domain)
DictyBase DDB_G0289547 0.00000005001214305021125 DDB_G0289547 on chromosome: 5
position 2930859 to 2932103
WormBase WBGene00022025 0.000000100009565553302 status:Confirmed UniProt:Q9B
L57 protein_id:CCD71919.1
SGD YPR112C 0.0004000184047659232 MRD1 Essential conserved prote
in that is part of the 90S pre
ribosome; required for product
ion of 18S rRNA and small ribo
somal subunit; contains five c
onsensus RNA-binding domains
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00101140(coding)
ATGGTTGGAAATAGACCTCCTACAAGTTTGTTGCCCACCAACTATATAGTATTAGTAAAT
ATGTTTACAGAAACTGATTTCTAAAACGATCCCGATTTCTTCACAGATCTTAAAGAAGAT
GTTAGTGAGGAATGCAAAAAGTATGGCGATGTTGTTGAAGTATTTGTAGCAATTCGTAGT
CCTTGTGGTTCTGTATTTGTATTGTTTAATGATGCTACTGGCGCAGTAAATTGTGCAAAG
AATATTGATGGAAGAATGTTTAATGGAAGACCTATTTCTTCATATTGTATTTCAGAAGAC
ACTCTTCAAGATGAATTACAAGAACATCTTTGA>TTHERM_00101140(protein)
MVGNRPPTSLLPTNYIVLVNMFTETDFQNDPDFFTDLKEDVSEECKKYGDVVEVFVAIRS
PCGSVFVLFNDATGAVNCAKNIDGRMFNGRPISSYCISEDTLQDELQEHL>TTHERM_00101140(gene)
ATGGTTGGAAATAGACCTCCTACAAGTTTGTTGCCCACCAACTATATAGTATTAGTAAAT
ATGTTTACAGAAACTGATTTCTAAAACGATCCCGATTTCTTCACAGATCTTAAAGAAGAT
GTTAGTGGTAATTAAATGTTTAAATTGATTAAAAAACTCATTCATATTAAATGAGTTAAG
TTAATACTAAATATTTTATTAAAATTATTTATTAGAGGAATGCAAAAAGTATGGCGATGT
TGTTGAAGTATTTGTAGCAATTCGTAGTCCTTGTGGTTCTGTATTTGTATTGTTTAATGA
TGCTACTGGCGCAGTAAATTGTGCAAAGAATATTGATGGAAGAATGTTTAATGGAAGACC
TATTTCTTCATATTGTATTTCAGAAGACACTCTTCAAGATGAATTACAAGAACATCTTTG
A