Identifiers and Description

Gene Model Identifier

TTHERM_00101140

Standard Name

RRM1 (RNA Recognition Motif-containing protein 1)

Aliases

PreTt22913 | 7.m00362

Description

RRM1 splicing factor

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF00076 ) RNA recognition motif. (a.k.a. RRM,

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 19%

TetraMine Data

TTHERM_00101140

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_00288.1	4.00060640795776e-64	splicing factor, CC1-like fami ly protein (548 aa)
Oxytricha	Contig10134.0.g98	0.00000000002000577768187062	RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
DictyBase	DDB_G0289547	0.00000005001214305021125	DDB_G0289547 on chromosome: 5 position 2930859 to 2932103
WormBase	WBGene00022025	0.000000100009565553302	status:Confirmed UniProt:Q9B L57 protein_id:CCD71919.1
SGD	YPR112C	0.0004000184047659232	MRD1 Essential conserved prote in that is part of the 90S pre ribosome; required for product ion of 18S rRNA and small ribo somal subunit; contains five c onsensus RNA-binding domains

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00101140(coding)
ATGGTTGGAAATAGACCTCCTACAAGTTTGTTGCCCACCAACTATATAGTATTAGTAAAT
ATGTTTACAGAAACTGATTTCTAAAACGATCCCGATTTCTTCACAGATCTTAAAGAAGAT
GTTAGTGAGGAATGCAAAAAGTATGGCGATGTTGTTGAAGTATTTGTAGCAATTCGTAGT
CCTTGTGGTTCTGTATTTGTATTGTTTAATGATGCTACTGGCGCAGTAAATTGTGCAAAG
AATATTGATGGAAGAATGTTTAATGGAAGACCTATTTCTTCATATTGTATTTCAGAAGAC
ACTCTTCAAGATGAATTACAAGAACATCTTTGA

>TTHERM_00101140(protein)
MVGNRPPTSLLPTNYIVLVNMFTETDFQNDPDFFTDLKEDVSEECKKYGDVVEVFVAIRS
PCGSVFVLFNDATGAVNCAKNIDGRMFNGRPISSYCISEDTLQDELQEHL

>TTHERM_00101140(gene)
ATGGTTGGAAATAGACCTCCTACAAGTTTGTTGCCCACCAACTATATAGTATTAGTAAAT
ATGTTTACAGAAACTGATTTCTAAAACGATCCCGATTTCTTCACAGATCTTAAAGAAGAT
GTTAGTGGTAATTAAATGTTTAAATTGATTAAAAAACTCATTCATATTAAATGAGTTAAG
TTAATACTAAATATTTTATTAAAATTATTTATTAGAGGAATGCAAAAAGTATGGCGATGT
TGTTGAAGTATTTGTAGCAATTCGTAGTCCTTGTGGTTCTGTATTTGTATTGTTTAATGA
TGCTACTGGCGCAGTAAATTGTGCAAAGAATATTGATGGAAGAATGTTTAATGGAAGACC
TATTTCTTCATATTGTATTTCAGAAGACACTCTTCAAGATGAATTACAAGAACATCTTTG
A