Identifiers and Description
Gene Model Identifier
TTHERM_00068110
Standard Name
RPT3 (26S proteasome regulatory subunit T3)
Aliases
PreTt13200 | 4.m00599 | 3707.m00236
Description
RPT3 26S protease regulatory subunit 6B
Genome Browser (Macronucleus)
Genome Browser (Micronucleus)
Gene Ontology Annotations
Cellular Component
Domains
( TIGR02880 ) CbbX protein
( PF00004 ) ATPase, AAA family
( PF08544 ) GHMP kinases C terminal
( TIGR02881 ) stage V sporulation protein K
( TIGR01242 ) 26S proteasome subunit P45 family
( TIGR01241 ) ATP-dependent metallopeptidase HflB
( TIGR01526 ) nicotinamide-nucleotide adenylyltransferase
( TIGR01313 ) carbohydrate kinase, thermoresistant glucokinase family
( PF07724 ) ATPase family associated with various
( PF07726 ) ATPase family associated with various
( PF07728 ) ATPase family associated with various
Gene Expression Profile
Tetrahymena Functional Genomics Database:
Change in Gene Expression
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.1%
TetraMine Data
TTHERM_00068110
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description
Stentor Coeruleus SteCoe_13018 0
WormBase WBGene00004503 9.997093137033517e-262 locus:rpt-3 Probable 26S pro
tease regulatory subunit 6B
status:Confirmed UniProt:P46
502 protein_id:CCD69926.1
Tetrahymena borealis EI9_02110.1 9.997093137033517e-262 26S proteasome subunit P45 fam
ily protein (402 aa)
DictyBase DDB_G0289003 9.997093137033517e-262 psmC4 on chromosome: 5 positio
n 2227887 to 2229274
SGD YDR394W 9.997093137033517e-262 RPT3 One of six ATPases of the
19S regulatory particle of th
e 26S proteasome involved in t
he degradation of ubiquitinate
d substrates; substrate of N-a
cetyltransferase B
Oxytricha Contig12666.0.1.g29 2.000339145488238e-180 ATPase family associated with
various cellular activities (A
AA)
General Information
No Data fetched for General Information
Associated Literature
Ref:21637855 : Xiong J, Yuan D, Fillingham JS, Garg J, Lu X, Chang Y, Liu Y, Fu C, Pearlman RE, Miao W (2011) Gene network landscape of the ciliate Tetrahymena thermophila. PloS one 6(5):e20124
Sequences
>TTHERM_00068110(coding)ATG GAA ATT GAA AAG ACT GGA TAA GCT GCT GCT CCT ACC AAT CTC AAT GAT TTA AGT GAG CAA GAT TTA TAT CAA AAA ATG AAA GAA TTA GAA AAG GAA TTA GAA TTC CTT GAT ATC TAA GAA GAA TTC ATT AAG GAT GAT TAA AAG AAG TTA AAG AGA GAG TTA GTT CGT TCA AAG GAA GAA TTA AAG AGA ATT CAA TCT ACA CCT CTT GTT ATT GGT CAC TTC ATT GAA ATG ATT GAT GAA TTG CAC GCA TTA GTT TCA TCA TCT GGT GGT TCT ACA TAC TAT GTT AGA GTT CTC TCT ACT TTA GAT AGA GAA TTA TTG AAA CCC TCA ACA AGT ATT GCA CTT CAT CGT CAT TCT CAC TCT GTT GTA GAT ATC CTT CCA AGT GAA TCT GAT TCT TCA ATT TAA ATG ATG AAA GTT ACT GAA AAA CCC GAT GTT TCT TAT CAA GAT ATT GGT GGT TTA GAT CAA TAA AAG TAA GAA ATG AAA GAA GCA GTA GAA CTT CCT TTA ACA TAT CCT GAA TTG TAT CAA TAA ATT GGT ATC GAC CCT CCA AGA GGT GTT TTA ATG TAT GGT CCT CCT GGT ACT GGT AAA ACT ATG ATG GCA AAA GCT GTT GCT CAC CAT ACT ACA GCT GCT TTT ATT AGA GTA GTT GGT TCT GAA TTC GTA TAA AAA TAT CTT GGT GAA GGC CCT AGA ATG GTC AGA GAT GTC TTT AAA CTT GCC AGA GAA AAT GCT CCT TCT ATT ATA TTT ATT GAT GAA GTC GAT GCT ATT GCT ACC AAA CGT TTT GAT GCT TAA ACT GGT GCT GAT AGA GAA GTT TAA AGA GTT TTA ATT GAA ATG CTT AAC TAA ATG GAT GGT TTC GAT CAA ACT ACA AAT GTC AAA GTT ATT ATG GCA ACT AAT AGA TCA GAT ACT CTT GAT CCT GCC CTT CTT CGT CCT GGT AGA CTT GAT AGA AAG ATT GAA TTC CCT CTT CCT GAT AGA AGA CAA AAG CGT CTT ATT TTC TAA ACT GTT ACA GCA AAG ATG AAC TTA TCT GAA GAT GTT GAT CTT GAA GCA TAT GTT AGC AGA CCC GAT AAA ATT TGT TGT GCT GAT ATA TCT GCA ATT TGT TAA GAA GCT GGT ATG CAA GCA GTT AGA AAG AAC AGA TAT GTT GTT ACA TAA AAA GAT TTC GAT AAG GCT TAT AAG ATA GTC ATT AGA AAA TCA GAA AGA GAA TTT AAT TTC TAC AAG TGA >TTHERM_00068110(protein)M E I E K T G Q A A A P T N L N D L S E Q D L Y Q K M K E L E K E L E F L D I Q E E F I K D D Q K K L K R E L V R S K E E L K R I Q S T P L V I G H F I E M I D E L H A L V S S S G G S T Y Y V R V L S T L D R E L L K P S T S I A L H R H S H S V V D I L P S E S D S S I Q M M K V T E K P D V S Y Q D I G G L D Q Q K Q E M K E A V E L P L T Y P E L Y Q Q I G I D P P R G V L M Y G P P G T G K T M M A K A V A H H T T A A F I R V V G S E F V Q K Y L G E G P R M V R D V F K L A R E N A P S I I F I D E V D A I A T K R F D A Q T G A D R E V Q R V L I E M L N Q M D G F D Q T T N V K V I M A T N R S D T L D P A L L R P G R L D R K I E F P L P D R R Q K R L I F Q T V T A K M N L S E D V D L E A Y V S R P D K I C C A D I S A I C Q E A G M Q A V R K N R Y V V T Q K D F D K A Y K I V I R K S E R E F N F Y K >TTHERM_00068110(gene)ATG GAA ATT GAA AAG ACT GGA TAA GCT GCT GCT CCT ACC AAT CTC AAT GTA AAT TAA AAT TAA ATT TGG AAT CAC AAG AAT TCA GTT ATC AAT TAT TTG GTG TTG TAG ATT TTG GGG AAT AAG CAA AAA TTT AGA AAA TCA AAA ATC ATT TTA TGA AAA CTT AAC ATT ATT TGT TTA AAC GAA GCA TAT AGA TAG TAA TCA AAA TTA TGA AAG TAT AAA AGT TTT ATC TAT AAA ATA TTA TAG GAT TTA AGT GAG CAA GAT TTA TAT CAA AAA ATG AAA GAA TTA GAA AAG GAA TTA GAA TTC CTT GAT ATC TAA GAA GAA TTC ATT AAG GAT GAT TAA AAG AAG TTA AAG AGA GAG TTA GTT CGT TCA AAG GAA GAA TTA AAG AGA ATT CAA TCT ACA CCT CTT GTT ATT GGT CAC TTC ATT GAA ATG ATT GAT GAA TTG CAC GCA TTA GTT TCA TCA TCT GGT GGT TCT ACA TAC TAT GTT AGA GTT CTC TCT ACT TTA GAT AGA GAA TTA TTG AAA CCC TCA ACA AGT ATT GCA CTT CAT CGT CAT TCT CAC TCT GTT GTA GAT ATC CTT CCA AGT GAA TCT GAT TCT TCA ATT TAA ATG ATG AAA GTT ACT GGT AAA TAT ATA TTT AAA GGC ATT ATT TTT AAT GAG TAA AAG CTA AGC TAT CAT ATT ATA ATA GTT CAG ATG CTT ATT GTA TAA GTT TCA AAT AGG AAA TAG GAT AAA TTT ACA CAA TAT ATT TAG AAT TAG AAT AAG AAA TAT CAA CAA AAC TTG ACA AAA TTT GTG AAA TAT TTT GAT AAT AAT TTA TGA TGA CTG AAG TCT ACT ACT TAT TGA TTA ATT TAT TTA ATA GAA ACA AAA TAA ATA AAT AAA CAA ATA ATC AAG CAA TCT AAT AAT AAA TAA AAA GAA AAT TAA AAG CTA AGA TAT TTT TTA AAT TAT TAT TTT TTT CAA TAT ATG AAT TAC AAA CTC TCT ATT GTC TTC AGA ATA GAT ACG TTT AAA ATA GGA ACT AAA AAT TTT AAA TAA ATT AAT TAG TTT ATA GAA ATG TTT TAG CTC ATA TCA AAA TAC TTA AAA TAA ATA ATT CTC AAT TAA GCT AAA ATC TTT TAA AAA TAA ATA AAT TTA ATT AAA AAA TAG AAA AAC CCG ATG TTT CTT ATC AAG ATA TTG GTG GTT TAG ATC AAT AAA AGT AAG AAA TGA AAG AAG CAG TAG AAC TTC CTT TAA CAT ATC CTG AAT TGT ATC AAT AAA TTG GTA TCG ACC CTC CAA GAG GTG TTT TAA TGT ATG GTC CTC CTG GTA CTG GTA AAA CTA TGA TGG CAA AAG CTG TTG CTC ACC ATA CTA CAG CTG CTT TTA TTA GAG TAG TTG GTT CTG AAT TCG TAT AAA AAT ATC TTG GTG AAG GCC CTA GAA TGG TCA GAG ATG TCT TTA AAC TTG CCA GAG AAA ATG CTC CTT CTA TTA TAT TTA TTG ATG AAG TCG ATG CTA TTG CTA CCA AAC GTT TTG ATG CTT AAA CTG GTG CTG ATA GGT AAT TAA TTA AAA ATT TAA AAA TAA TAT TTA TGT TTT ACA TTA CTG TTA TTT AAA ATT ACA GAG AAG TTT AAA GAG TTT TAA TTG AAA TGC TTA ACT AAA TGG ATG GTT TCG ATC AAA CTA CAA ATG TCA AAG TTA TTA TGG CAA CTA ATA GAT CAG ATA CTC TTG ATC CTG CCC TTC TTC GTC CTG GTA GAC TTG ATA GAA AGA TTG AAT TCC CTC TTC CTG ATA GAA GAC AAA AGC GTC TTA TTT TCT AAA CTG TTA CAG CAA AGA TGA ACT TAT CTG AAG ATG TTG ATC TTG AAG CAT GTA TTA AAA TCT TAT TTA ATT AAA TTA AGG GTT AAA TAT ATT TTT AAA TTA ATT TAG ATG TTA GCA GAC CCG ATA AAA TTT GTT GTG CTG ATA TAT CTG CAA TTT GTT AAG AAG CTG GTA TGC AAG CAG TTA GAA AGA ACA GGT AAT TTA AAT TTA GCA GTT AAA GAT TAG AAG TTA GTT TTT ACA ATT ATT TCA TAA TTA AAA TAG ATA TGT TGT TAC ATA AAA AGA TTT CGA TAA GGC TTA TAA GAT AGT CAT TAG AAA ATC AGA AAG AGA ATT TAA TTT CTA CAA GTG A