Identifiers and Description
Gene Model Identifier
TTHERM_00279670
Standard Name
RPT1 (26S proteasome regulatory subunit T1)
Aliases
PreTt04810 | 25.m00274 | 3694.m00059
Description
RPT1 26S proteasome regulatory subunit
Genome Browser (Macronucleus)
Genome Browser (Micronucleus)
Gene Ontology Annotations
Cellular Component
Domains
( TIGR02880 ) CbbX protein
( PF00004 ) ATPase, AAA family
( PF00158 ) Sigma-54 interaction domain
( TIGR02881 ) stage V sporulation protein K
( TIGR01242 ) 26S proteasome subunit P45 family
( TIGR01241 ) ATP-dependent metallopeptidase HflB
( TIGR02237 ) DNA repair and recombination protein
( TIGR02928 ) orc1/cdc6 family replication initiation protein
( TIGR00382 ) ATP-dependent Clp protease, ATP-binding subunit
( PF07724 ) ATPase family associated with various
( PF07726 ) ATPase family associated with various
( PF07728 ) ATPase family associated with various
Gene Expression Profile
Tetrahymena Functional Genomics Database:
Change in Gene Expression
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.2%
TetraMine Data
TTHERM_00279670
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description
Stentor Coeruleus SteCoe_31456 0
WormBase WBGene00004501 9.997093137033517e-262 locus:rpt-1 26S protease reg
ulatory subunit 7 status:Con
firmed UniProt:Q18787 prot
ein_id:CAB01414.1
Tetrahymena borealis EI9_08919.1 9.997093137033517e-262 26S proteasome subunit P45 fam
ily protein (432 aa)
DictyBase DDB_G0276917 9.997093137033517e-262 psmC2 on chromosome: 2 positio
n 7234040 to 7235588
Oxytricha Contig11163.0.g1 9.997093137033517e-262 ATPase family associated with
various cellular activities (A
AA)
SGD YKL145W 9.997093137033517e-262 RPT1 One of six ATPases of the
19S regulatory particle of th
e 26S proteasome involved in t
he degradation of ubiquitinate
d substrates; required for opt
imal CDC20 transcription; inte
racts with Rpn12p and Ubr1p; m
utant has aneuploidy tolerance
General Information
No Data fetched for General Information
Associated Literature
Ref:21637855 : Xiong J, Yuan D, Fillingham JS, Garg J, Lu X, Chang Y, Liu Y, Fu C, Pearlman RE, Miao W (2011) Gene network landscape of the ciliate Tetrahymena thermophila. PloS one 6(5):e20124
Sequences
>TTHERM_00279670(coding)ATG GCT CCT AGC GCA AAC GAC AAA GAT AAT TAA CAA GGT GAA GAA AAA AAG CAC ATC CCT TTG GAT GAA GGT GAT ATT TCT TTA TTG AAA GTT TAT GGC ATG GGT CCA TAT GCA GAA TCC ATT AAA TCA ACT GAA GAA GAA AAT AAG AAT TTA GTA GTA AAA ATT AAC AAA CTA TGC GGT ATA AAA GAG AGT GAT ACA GGT CTT TCT TTA CCT TCT TAA TGG GAT TTG AAG GGT GAT GAA ATT AGA TTG TCT TAA TAA CAT TCT TTA CAA GTC GCT CGT TGC AAT AAA ATC ATT CCT GGT GAC TAA CCC ACT GAA AAT AAA TAC ATG ATT AGC ATC AAG CAA ATG GCC AAA TTC GTT GTA GGT TTA GGT GAT AAG CTA GCT CCT ACC GAT ATT GAT GAA GGT ATG AGA GTT GGT GTT GAG AAA TAA AAA TAT TCT ATT CAA CTT CCT CTT CCT CCT AAA ATT GAT CCT TCA GTC ACC ATG ATG ACT GTA GAA GAA AAA CCT GAT GTT ACT TAT TCA GAT ATT GGT GGT GCT AAT GAA TAA TTA GAT CGT CTT AAG GAA GTT GTA GAA ATG CCT TTA CTC TAG CCT GAA AAG TTT ATT GAA TTG GGT ATT GAT CCT CCT AAA GGT GTT TTA CTC TAT GGT CCT CCT GGT ACT GGT AAA ACC TTA ACT GCA AGA GCC GTT GCC AAC AGA ACA GAT GCC TGC TTC ATC CGT GTC ATC GGT TCA GAA CTT GTT TAA AGA TAT GTT GGT GAA GGT GCA AGA ATG GTT AGA GAA ATC TTC TAG TTA GCA AGA ACC AAG AAA GCT TGT ATC ATT TTC TTC GAT GAA ATC GAT GCT ATT GGT GGT GCT AGA CAT GAT GAC GGT GCT GGT AGT GAT AAT GAA GTC TAA CGT ACT ATG CTT GAA ATC GTA AAT TAA TTG GAT GGC TTT GAA AGC AGA GGT AAC ATT AAA GTT TTG ATG GCT ACA AAT AGA CCT GAT ACT TTA GAT CCC GCT TTG TTA AGA CCT GGT AGA TTA GAT AGA AAG GTT GAA TTC GGT CTT CCA GAC TTA GAA GGC AGA ACT CAC ATT TTT AAA ATT CAT GCC AGA CAC ATG AGT ATG GAA AAA AAT ATT CGT TAT GAA TTA TTA GCA AGA TTA TGC CCT AAC ACC ACT GGT GCT GAT CTT AGA TCT GTC TGC ACT GAA GCT GGT ATG TTC GCC ATT AGA GCA AGA AGA AAA GCC ATC TCT GAA AAG GAC CTT CTA GAA GCT ATT GAA AAG GTT ATA AAA GGA TAT TCT AAA TTC TCT GCA ACT GGC AAA TAT TTA GTT TAT AAT TGA >TTHERM_00279670(protein)M A P S A N D K D N Q Q G E E K K H I P L D E G D I S L L K V Y G M G P Y A E S I K S T E E E N K N L V V K I N K L C G I K E S D T G L S L P S Q W D L K G D E I R L S Q Q H S L Q V A R C N K I I P G D Q P T E N K Y M I S I K Q M A K F V V G L G D K L A P T D I D E G M R V G V E K Q K Y S I Q L P L P P K I D P S V T M M T V E E K P D V T Y S D I G G A N E Q L D R L K E V V E M P L L Q P E K F I E L G I D P P K G V L L Y G P P G T G K T L T A R A V A N R T D A C F I R V I G S E L V Q R Y V G E G A R M V R E I F Q L A R T K K A C I I F F D E I D A I G G A R H D D G A G S D N E V Q R T M L E I V N Q L D G F E S R G N I K V L M A T N R P D T L D P A L L R P G R L D R K V E F G L P D L E G R T H I F K I H A R H M S M E K N I R Y E L L A R L C P N T T G A D L R S V C T E A G M F A I R A R R K A I S E K D L L E A I E K V I K G Y S K F S A T G K Y L V Y N >TTHERM_00279670(gene)ATG GCT CCT AGC GCA AAC GAC AAA GAT AAT TAA CAA GGT GAA GAA AAA AAG CAC ATC CCT TTG GAT GAA GGT GAT ATT TCT TTA TTG AAA GTT TAT GGC ATG GGT CCA TAT GCA GAA TCC ATT AAA TCA ACT GAA GAA GAA AAT AAG AAT TTA GTA GTA AAA ATT AAC AAA CTA TGC GGT ATA AAA GAG AGT GAT ACA GGT CTT TCT TTA CCT TCT TAA TGG GAT TTG AAG GGT GAT GAA ATT AGA TTG TCT TAA TAA CAT TCT TTA CAA GTC GCT CGT TGC AAT AAA ATC ATT CCT GGT GAC TAA CCC ACT GAA AAT AAA TAC ATG ATT AGC ATC AAG CAA ATG GCC AAA TTC GTT GTA GGT TTA GGT GAT AAG CTA GCT CCT ACC GAT ATT GAT GAA GGT ATG AGA GTT GGT GTT GAG AAA TAA AAA TAT TCT ATT CAA CTT CCT CTT CCT CCT AAA ATT GAT CCT TCA GTC ACC ATG ATG ACT GTA GAA GAA AAA CCT GAT GTT ACT TAT TCA GAT ATT GGT GGT GCT AAT GAA TAA TTA GAT CGT CTT AAG GTA ATT AAT TCA TTT TAA AAA ATA ATA TAA ATC AAA GGA GAT GCA TGC ATA AAT TTG ATA TTT CAA AGC AGT AAC GAA GTT AGA ATG AAT AGC GGT ATT TTC CTA TCT AAA ATA ATA AAG AAA TTA AGA AAA AGC ATA ATC ATT TCA GAA AAA TAT GCA TTT ATT TTG AAG ATT TTA ATA AAA ACA CTT AGT TTA AAT ATT TAA ACT AAA AAA TAT GGT TTT TGC TTT GAA GCA TTT ATT TAT TAA CAA TAA ATA AAA AAG CAA ATT AAA ATA AGA TTT TTA TTT ATT GCA TTT TTT ATT AAT TGA ATT GAT ATT TAA CCA ATT TAT TCC CTT GAA TAA TAA ATA GGA AGT TGT AGA AAT GCC TTT ACT CTA GCC TGA AAA GTT TAT TGA ATT GGG TAT TGA TCC TCC TAA AGG TGT TTT ACT CTA TGG TCC TCC TGG TAC TGG TAA AAC CTT AAC TGC AAG AGC CGT TGC CAA CAG AAC AGA TGC CTG CTT CAT CCG TGT CAT CGG TTC AGA ACT TGT TTA AAG ATA TGT TGG TGA AGG TGC AAG AAT GGT TAG AGA AAT CTT CTA GTT AGC AAG AAC CAA GAA AGC TTG TAT CAT TTT CTT CGA TGA AAT CGA TGC TAT GTA ATT AAA TTA AAT ATA AAC ACT TTC TAA GCA TTC AAG CCA AAT TTT CAA AAT TTA TAA ATA AAC TTT TGA TTA ACT CAT TAT AAT ATT TTT TTA AAT AAT TAA TTA ATT AAT TAA TTT AGT GGT GGT GCT AGA CAT GAT GAC GGT GCT GGT AGT GAT AAT GAA GTC TAA CGT ACT ATG CTT GAA ATC GTA AAT TAA TTG GAT GGC TTT GAA AGC AGA GGT AAC ATT AAA GTT TTG ATG GCT ACA AAT AGA CCT GAT ACT TTA GAT CCC GCT TTG TTA AGA CCT GGT AGA TTA GAT AGA AAG GTT GAA TTC GGT CTT CCA GAC TTA GAA GGC AGA ACT CAC ATT TTT AAA ATT CAT GCC AGA CAC ATG AGT ATG GAA AAA AAT ATT CGT TAT GAA TTA TTA GCA AGA TTA TGC CCT AAC ACC ACT GGT GCT GAT CTT AGA TCT GTC TGC ACT GAA GCT GGT ATG TTC GCC ATT AGA GCA AGA AGA AAA GCC ATC TCT GAA AAG GAC CTT CTA GAA GCT ATT GAA AAG GTT ATA AAA GGA TAT TCT AAA TTC TCT GCA ACT GGC AAA TAT TTA GTT TAT AAT TGA