Identifiers and Description

Gene Model Identifier

TTHERM_00434070

Standard Name

RPS9 (Ribosomal Protein of the Small subunit 9)

Aliases

PreTt26548 | 48.m00311 | 3831.m01643

Description

Homolog of yeast RPS9, human RPS9, bacterial RPS4;

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• intracellular (IEA) | GO:0005622

Molecular Function

• rRNA binding (IEA) | GO:0019843
• RNA binding (IEA) | GO:0003723

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 11.1%

TetraMine Data

TTHERM_00434070

WebApollo

Fullscreen View

Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_04232.1	9.999664388307901e-124	ribosomal protein S4 containin g protein (182 aa)
SGD	YPL081W	4.999773105566236e-81	RPS9A Protein component of the small (40S) ribosomal subunit ; nearly identical to Rps9Bp a nd has similarity to E. coli S 4 and rat S9 ribosomal protein s
DictyBase	DDB_G0289877	8.996246542595932e-80	rps9 on chromosome: 5 position 3486480 to 3487388
WormBase	WBGene00004478	2.0001503375893664e-79	locus:rps-9 40S ribosomal pr otein S9 status:Confirmed UniProt:Q20228 protein_id:CA A93262.1
Oxytricha	Contig18343.0.g85	2.0001503375893664e-79	Ribosomal protein S4/S9 N-term inal domain
Stentor Coeruleus	SteCoe_23097	1.6458114310822737e-38

General Information

No Data fetched for General Information

Associated Literature

1. Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6

Sequences

>TTHERM_00434070(coding)
ATGATAAAATATAAGGGGAGAAAATTAGTTGGAATAAATTTAAAAGAAAAATTTTGGGCG
TGTGGGGAGGAAAGTACAAAGATAATTTAAAGAGAAAAGTACAGCATCTAAATCAAAGTA
TTATCTAAAGTCAAATAAAAGATATATAAAACCAAAAGTATATAAATAAAAATGGGTAAA
ACCTACATCAACACTTCCAAGACCTACTCTACCCCCAGAAGACCTTATGAAAAGGAAAGA
CTCGATAATGAAATGAAGCTTATCGGTACTTTCGGTTTAAAGAACAAGAGAGAAGTCTGG
AGAGTTTAAATGATCTTGGCTAAGTTCAGAAAGGCTGCTAGAGAATTGCTCACCTTAGAC
CCCAAGGACCCCAGAAGATTATTCGAAGGTTCCGCCCTTTTAAGAAGAATGTTCAAATAC
GGTCTCCTCAGTGAATAAGAAAGAAAGTTGGATTACGTCTTGGGTTTGACCATTCACAAG
CTCATGGAAAGAAGACTCCAAACCAGAGTTTTCAAGTTAAATTTGGCTAACTCTATCCAC
CATTCCAGAGTCCTTATTAGACAAAGACACATCAAGGTTGGTAAGAACTTAGTCAATGTT
CCTTCCTTCATGGTTAGAACTGACTCTGAAAAGTCTATCGATTTTGCTTCTACTTCTCCC
TTAGGTGGTGGTCGCGAAGGTAGAACCAAGAGAAAGAATGCCAAGAAGTCTGCTTGA

>TTHERM_00434070(protein)
MIKYKGRKLVGINLKEKFWACGEESTKIIQREKYSIQIKVLSKVKQKIYKTKSIQIKMGK
TYINTSKTYSTPRRPYEKERLDNEMKLIGTFGLKNKREVWRVQMILAKFRKAARELLTLD
PKDPRRLFEGSALLRRMFKYGLLSEQERKLDYVLGLTIHKLMERRLQTRVFKLNLANSIH
HSRVLIRQRHIKVGKNLVNVPSFMVRTDSEKSIDFASTSPLGGGREGRTKRKNAKKSA

>TTHERM_00434070(gene)
ATGATAAAATATAAGGGGAGAAAATTAGTTGGAATAAATTTAAAAGAAAAATTTTGGGCG
TGTGGGGAGGAAAGTACAAAGATAATTTAAAGAGAAAAGTACAGCATCTAAATCAAAGTA
TTATCTAAAGTCAAATAAAAGATATATAAAACCAAAAGTATATAAATAAAAATGGGTAAA
ACCTACATCAACAGTAAATAATTTTTTTAATAATTGATCTCCATATTAATTGCTTTATTC
TCTTATCACAACAGCTTCCAAGACCTACTCTACCCCCAGAAGACCTTATGAAAAGGAAAG
ACTCGATAATGAGTACAATATTCATTTAATTATCCACTCTGACTTCATCCAATCCATTAA
TCTATCTATCAAATTATTATTTACTCATTCTTATTTTATCAACACAAATTTCACAAAACC
CTTAATTTAACATCCCAATCCATTATCGAAATTTGATTTATTAGCACAATTTCCTATATC
CATGGGACCAAAGCAAATTATTTGTTGAATTTAATGAGAAAGTAGTAGCTTCTCTAAAAA
TTATGAACCATTCTTACTGTAGTTTTAGCATTATGATATTTCTCGCAAGTAATTGATTAG
AAAATGTGAATCAATAGAAAAATAAATAAATAGCCTCAAGTTAAAAAACGAAGTAGATTA
ATTAGTAAATAAATGGCAGCTTAAGGAAGTAATTAATTATATATCCTTAATTATAAGCCA
TCAATCAATCAGAAAAAAAAAGAAGAAACAAACCATAAACCATATGAAAATAGTAAGGCA
TTAATTCGCTAACTAATCAAGCTATATCTAGGTAAAACCAAATTAGAAAGCAGGATGGAT
GCAAATAATATCCTATCAATAGAGAGAAGCAGTAAAAAAATTTGTTTAAAATCAATTCTT
AAAAAAATAGAGTGATTATGTATAAAATATCTTAAATAAGCAAACCAAAACAATATAAAA
ACCAAAGCATTAGTATTAAAACAATTAAGATGCTAAAGATTAATTAAAAACCAAAGGTTT
ATTTAGGATATTTTATTGATATATAGCAGAAAAAATGATTATGATTGATTGATTGATCAT
TTAATCAATTTGGTCAAAGGATCAATCAATCTCACTCTATTGATCTGTCAAAAAAAGAAT
TGGCTATCTATCAAGCCAAAGAGACGCAATAAAAGAATTAAAAAGAGTTTGTATGAAATA
TTAAAATATATTCATCATAAACGAACAACTAAAATTATTAAAACAAACAAATTTTTAATT
AAGCTCTCTTGATACAAACCAAATTCAAAATAAATGTGTACTTTTTGATAAATTTTCTAA
CTAAGTTCCTACTGCTTTTTAAAATTCCTGATCACTTTCTTTTCAAATTCATAGTTATTA
ATAATTAGATGATATAAATTCTTTGTTTGATTAATATATCAGTTAATATCCTACCTATTT
CGCTAAACACCTGTCAACTACTAATTAGCTCATATGATTCTTTACTTGCTTACAATAGCT
TGTCCTAAACTTGTTAAGAAATAAATACCAATCCACAAATAATACTAAAATGATTAATGA
TTTTTGTTGATAAAATAAGCATTTATAAATAATGAATGATAAATAGAAAGAAAAAAACCC
ATTTTTATAAATTAAATTTTAATTTTAATATTTTTTTTATTTAGAATGAAGCTTATCGGT
ACTTTCGGTTTAAAGAACAAGAGAGAAGTCTGGAGAGTTTAAATGATCTTGGCTAAGTTC
AGAAAGGCTGCTAGAGAATTGCTCACCTTAGACCCCAAGGACCCCAGAAGATTATTCGAA
GGTTCCGCCCTTTTAAGAAGAATGTTCAAATACGGTCTCCTCAGTGAATAAGAAAGAAAG
TTGGATTACGTCTTGGGTTTGACCATTCACAAGCTCATGGAAAGAAGACTCCAAACCAGA
GTTTTCAAGTTAAATTTGGCTAACTCTATCCACCATTCCAGAGTCCTTATTAGACAAAGA
CACATCAAGTAATTAACTAATTACCATTATTTGTTAAATATGTTAATTAATTTATTTATT
TAATTTATTAATAGGGTTGGTAAGAACTTAGTCAATGTTCCTTCCTTCATGGTTAGAACT
GACTCTGAAAAGTCTATCGATTTTGCTTCTACTTCTCCCTTAGGTGGTGGTCGCGAAGGT
AGAACCAAGAGAAAGAATGCCAAGAAGTCTGCTTGA