Identifiers and Description

Gene Model Identifier

TTHERM_00471090

Standard Name

RPS7 (Ribosomal Protein of the Small subunit 7)

Aliases

PreTt22523 | 56.m00227 | 3686.m00070

Description

Homolog of yeast RPS7, human RPS7;

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• ribosome (IEA) | GO:0005840
• intracellular (IEA) | GO:0005622

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

• ( PF01251 ) ribosomal protein S7e

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 9.8%

TetraMine Data

TTHERM_00471090

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_11332.1	2.9998177333176706e-124	30S ribosomal protein S7e (198 aa)
DictyBase	DDB_G0289025	9.995528898049344e-31	rps7 on chromosome: 5 position 2252902 to 2253483
WormBase	WBGene00004476	9.002954397174899e-30	locus:rps-7 40S ribosomal pr otein S7 status:Confirmed UniProt:Q23312 protein_id:CA B00058.1
SGD	YOR096W	1.9993007828132465e-27	RPS7A Protein component of the small (40S) ribosomal subunit , nearly identical to Rps7Bp; interacts with Kti11p; deletio n causes hypersensitivity to z ymocin; has similarity to rat S7 and Xenopus S8 ribosomal pr oteins
Oxytricha	Contig980.0.g21	5.999207186122604e-25	Ribosomal protein S7e
Stentor Coeruleus	SteCoe_37018	2.1151310375910805e-19

General Information

No Data fetched for General Information

Associated Literature

1. Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6

Sequences

>TTHERM_00471090(coding)
ATGGCTTTAGCTAAATTCCACAAGAAGCAATCCTTAACTAAGATCGAAGAATAGGTCGGT
TCCGCTTTGGTTGAACTCCAAAACACCCACCCTGATTTGAAGACCTCCCTCGAATCTATC
ATCCTCACCCAAGTTAAGGAATTCTAAATTAACAAGACCAACAAGAAGGCTAAGTCTGCT
GTCTTAATTTACGTCCACTTCCAATCTTACAGAGTTCTTTTGTCTGCTGCTAGAAAGCTC
ATCATCGAACTCGAAAAGAAGCTCAAGCAAATCGTCTTCTTCACCGCTTAAAGAAAGATC
GAATCTAAGTGGGTTAAGGAACACAAGTCTCAACAAAGACCCAGATCCAGATGTTTGACC
TACGTCTACGATGCTCTCCTTGACGACTTACTCCTTCCTTCCACCCTCATTGGTAAGAGA
ATCAGAGCTAGACTCGATGGTACTTCTTTCTACAGAATCCAATTAGACCAAAACGATAGA
GATTTCTTGGAAGAAAAGTTAGATGCTATCACTCACATCTATAAGACTGTCACCACCAGA
GAAGTCACCTTCGAATTCAAGGAAGACAAAACTTTCCATACCTTCAAGAAATGA

>TTHERM_00471090(protein)
MALAKFHKKQSLTKIEEQVGSALVELQNTHPDLKTSLESIILTQVKEFQINKTNKKAKSA
VLIYVHFQSYRVLLSAARKLIIELEKKLKQIVFFTAQRKIESKWVKEHKSQQRPRSRCLT
YVYDALLDDLLLPSTLIGKRIRARLDGTSFYRIQLDQNDRDFLEEKLDAITHIYKTVTTR
EVTFEFKEDKTFHTFKK

>TTHERM_00471090(gene)
ATGGCTTTAGCTAAATTCCACAAGAAGCAAGTAATTAAATTGATTTAAGAAAAGAAGAAG
CATAGCTTCGCAAACATTTCACAGAGTTAAATGCAAATTATTTATATTTATAAAATAGTC
CTTAACTAAGATCGAAGAATAGGTCGGTTCCGCTTTGGTTGAACTCCAAAACACCCACCC
TGATTTGAAGACCTCCCTCGAATCTATCATCCTCACCCAAGTTAAGGAATTCTAAATTAA
CAAGACCAACAAGAAGGCTAAGTCTGCTGTCTTAATTTACGTCCACTTCCAATCTTACAG
AGTTCTTTTGTCTGCTGCTAGAAAGCTCATCATCGAACTCGAAAAGAAGCTCAAGCAAAT
CGTCTTCTTCACCGCTTAAAGAAAGATCGAATCTAAGTGGGTTAAGGAACACAAGTCTCA
ACAAAGACCCAGATCCAGATGTTTGACCTACGTCTACGATGCTCTCCTTGACGACTTACT
CCTTCCTTCCACCCTCATTGGTAAGAGAATCAGAGCTAGACTCGATGGTACTTCTTTCTA
CAGAATGTAATTTATTTAGCCCTTTTTTCAAAATTTTTCCTACTTATTAGATACTTTCAT
CTCTATAAGCTCTCCTTTTTTCGAATTTTATCTCTTCAAATATAGCCTTTAAAAATAATA
ATAACCATCAAAAATGATACTGAGTGAAGTAAAAAAATTTAGCAGACCGCCTATGATTTA
TCAGTTATGCGAAAAATAACATTTAATTAGTTTTAGTTAGCATTGATAGCTTCTACGAAG
TGGAATTAAATCATCAAAAAATTAAATTCCTTCATTTTTCAACTAAATTTATGACAAAAT
AATAAGATCAAAAATAAGAAAATTGGCTTAAATGTGTCCCCTTTTTAAGTAGTAAAATTA
AATTAATAAGGAAAGCAGTTATGTATTGAATTAAAAGGGAATCACGATTCAGAATTTTGG
TTAAAAAGCTAAGGCTTATTCAGCAAGTTAAATAGAATATTTATAAAATAGTTCAATAAT
AGAGTTTATTTCCGCATATCATTGATTGATTAGCTGCAAAAAAACAAAATAGAATAGTTG
AAAGTTAATTTTGATCTGTTTCAGAAAAGACTAATTAACTTAAAAGCTATAAATTTAAAA
GGTCCAAAAGTGAAAAGTTGTAAATGAACGAACAATAAATATGTTGAAAGTCACACCTAT
CTATGTACTTTTTTCCTACTTATAGAACTCATTCAATGATCAGTCAATCAAAAAATGAAA
ATTCATATGATTTTACAATTAAAATGTTAAATTGAGTATACTTGACAGGTAGAATCATAT
GAATTATGTACTTCCTTCATAATTAGAATAACGATTGCTTGATGAATGATGCTACTAACT
AACTAAAATAAATTATTTTCTATGTATTTGATCTTTGAAACCTTCTGGAGTGTAAAGCTA
AATACTTAAGAATAAATAAAAACAATTTTAAGAAGTAAGCCTAACCTTCTTTTTAATAAG
TGCTTTGCTTGTTTAATTATCTAAAGATTAACTAAATCATTTAACTAAATTAATTAAACA
ACTCTTTTCAGTAATCAGATAAAAATGATTTTTGCTAAATACTTCTAATAAACATAAAAT
TTAAATAAGAAAACTGAATCTGAAAAATATTAACAATAATTAATAACAATTTTTATTTAT
AATGGCTGATGGAGCTTAAAATGATTGTAAAAACAAAAATTAAATGAGAAAAAGAGAGAT
AAAAATGAGATGAATTATCTATATTTATTTATAAAATCATTTTATTCTAGATATTAAAAT
TAATTTCAATAAAAAAAATAGCCAATTAGACCAAAACGATAGAGATTTCTTGGAAGAAAA
GTTAGATGCTATCACTCACATCTATAAGACTGTCACCACCAGAGAAGTCACCTTCGAATT
CAAGGAAGACAAAACTTTCCATACCTTCAAGAAATGA