Identifiers and Description

Gene Model Identifier

TTHERM_01386050

Standard Name

RPS5 (Ribosomal Protein of the Small subunit 5)

Aliases

PreTt28119 | 358.m00012

Description

RPS5 40S ribosomal protein S5; Homolog of yeast RPS5- human RPS5- bacterial RPS7

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• intracellular (IEA) | GO:0005622
• ribosome (IEA) | GO:0005840

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

• ( TIGR01028 ) ribosomal protein S7
• ( TIGR01029 ) ribosomal protein S7
• ( PF00177 ) ribosomal protein S7p/S5e

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10%

TetraMine Data

TTHERM_01386050

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_20493.1	1.999872053281847e-142	ribosomal protein S7 containin g protein (201 aa)
Oxytricha	Contig1487.0.g85	1.0002223712504345e-79	Ribosomal protein S7p/S5e
WormBase	WBGene00004474	6.998089991989877e-78	locus:rps-5 40S ribosomal pr otein S5 status:Confirmed UniProt:P49041 protein_id:CA A92971.1
DictyBase	DDB_G0286075	3.9983507938127826e-75	rps5 on chromosome: 4 position 4031568 to 4032398
SGD	YJR123W	7.997481627602355e-72	RPS5 Protein component of the small (40S) ribosomal subunit, the least basic of the non-ac idic ribosomal proteins; phosp horylated in vivo; essential f or viability; has similarity t o E. coli S7 and rat S5 riboso mal proteins
Stentor Coeruleus	SteCoe_18465	4.4737793061811207e-38

General Information

No Data fetched for General Information

Associated Literature

1. Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6

Sequences

>TTHERM_01386050(coding)
ATGTCTGTAGAAAAAGGATTTGCCACCCAACCCAAACTTTTCGGTAAGTGGAACTACGAT
GAAGTCAAGATCTAAGATCCTTGCTTCTAAAACTACATTGCTTGTACCACTACCAAGTCC
CAAGTTTTCGTTCCCCACACTGCTGGCAGATATCAAGTCAAGAAGTTCAGAAAGACTCAA
TGCCCCATTGTTGAAAGATTAATTGGTACTCTTATGTTCCACGGTAGAAACGCTGGTAAG
AAGGCTCTCTGCATCAAGGTCGTCAAGAACGCTTTTGAAATCATCCACTTGGTTACCGGA
AGAAACCCCTTGGAAGTTTTCGTTGGTGCCGTCCAAAATGCTGGTCCCAGAGAAGACTCC
ACCAGAATCGGTACTGCTGGTGTCGTCAGAAAATAAGCTGTCGACGTTGCTCCCATGAGA
AGAGTTAACCTTGCTATTTATTTCATCATTAAGGGTTGCAGAGAATCTGCTTTCAAATCA
ATGAGATCTATCGCTGAAACCTTAGCTGATGAAATCATCAATGCTGAAAAGAACAACACC
CAATCTTCCTGGGCTATTAGAAAGAAAGACGAAATCGAAAAGGTCGCTAAGGGTAACAGA
TGA

>TTHERM_01386050(protein)
MSVEKGFATQPKLFGKWNYDEVKIQDPCFQNYIACTTTKSQVFVPHTAGRYQVKKFRKTQ
CPIVERLIGTLMFHGRNAGKKALCIKVVKNAFEIIHLVTGRNPLEVFVGAVQNAGPREDS
TRIGTAGVVRKQAVDVAPMRRVNLAIYFIIKGCRESAFKSMRSIAETLADEIINAEKNNT
QSSWAIRKKDEIEKVAKGNR

>TTHERM_01386050(gene)
ATGTCTGTAGAAAAAGGATTTGCCACCCAACCCAAACTTTTCGGTAAGTGGAACTACGAT
GAAGTCAAGATCTAAGATCCTTGCTTCTAAAACTACATTGCTTGTACCACTACCAAGTCC
CAAGTTTTCGTTCCCCACACTGCTGGCAGATATCAAGTCAAGAAGTTCAGAAAGACTCAA
TGCCCCATTGTTGAAAGATTAATTGGTACTCTTATGTTCCACGGTAGAAACGCTGGTAAG
AAGGCTCTCTGCATCAAGGTCGTCAAGAACGCTTTTGAAATCATCCACTTGGTTACCGGA
AGAAACCCCTTGGAAGTTTTCGTTGGTGCCGTCCAAAATGCTGGTCCCAGAGAAGACTCC
ACCAGAATCGGTACTGCTGGTGTCGTCAGAAAATAAGCTGTCGACGTTGCTCCCATGAGA
AGAGTTAACCTTGCTATTTATTTCATCATTAAGGGTTGCAGAGAATCTGCTTTCAAATCA
ATGAGATCTATCGCTGAAACCTTAGCTGATGAAATCATCAATGCTGAAAAGAACAACACC
CAATCTTCCTGGGCTATTAGAAAGAAAGACGAAATCGAAAAGGTCGCTAAGGGTAACAGA
TGA