Identifiers and Description

Gene Model Identifier

TTHERM_00526450

Standard Name

RPS30 (Ribosomal Protein of the Small subunit 30)

Aliases

PreTt06383 | 66.m00182 | 3722.m00040

Description

Homolog of yeast RPS30, human RPS30;

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• ribosome (IEA) | GO:0005840
• intracellular (IEA) | GO:0005622

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

• ( PF04758 ) Ribosomal protein S30

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.4%

TetraMine Data

TTHERM_00526450

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_13396.1	1.000159011384939e-43	ribosomal protein S30 containi ng protein (81 aa)
Oxytricha	Contig16083.0.g100	0.00000000000040012475857291343	Ribosomal protein S30
SGD	YOR182C	0.00000000019994075865167896	RPS30B Protein component of th e small (40S) ribosomal subuni t; nearly identical to Rps30Ap and has similarity to rat S30 ribosomal protein
WormBase	WBGene00004499	0.0000000010002658722841845	locus:rps-30 status:Confirme d UniProt:Q18231 protein_i d:CCD65769.1
DictyBase	DDB_G0273743	0.000000030002053728821195	rps30-2 on chromosome: 2 posit ion 3349136 to 3349937

General Information

No Data fetched for General Information

Associated Literature

1. Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6

Sequences

>TTHERM_00526450(coding)
ATGGGTCGTATGCACGGTACTCTCGCTAAGGCCGGTAAGGTCAGAAAATAAACCCCCAAG
GTTGAAAAGAAGGACAAGCCCAGAAAGACTCCTAAGGGTAGATCTTACAAGAGAATCCTC
TACAACAGAAGATATGCTCCTCACATCTTGGCCACTGATCCCAAGAAGAGAAAGTCTCCC
AACTGGCACGCTGGTAAGAAGGAAAAGATGGACGCTGCTGCCAATCCCGTCAAGAAGGAT
TGA

>TTHERM_00526450(protein)
MGRMHGTLAKAGKVRKQTPKVEKKDKPRKTPKGRSYKRILYNRRYAPHILATDPKKRKSP
NWHAGKKEKMDAAANPVKKD

>TTHERM_00526450(gene)
ATGGGTAAGCCTTTTTTTTATTGAATATGCTGAACTTTCAAAATGCAAAATTTTTTCAAA
TGAACACCACTAAATTATTTTATCTTATTATAAAAACAGGTCGTATGCACGGTACTCTCG
CTAAGGCCGGTAAGGTAGGATATTCGCTTTATTCATTTTAAGCATCATCATGATGATATA
TTTTAATGATTTTTCTCTCCTTTCTTTAACGATTTGTATTAAGTTGAATTGGCAAATAGA
TAAATAAATATATTATTACCTTAAAAAGTAGAACAACATCTAATAGATTTTAAAATAAAT
TAAGGGAAAAAATGATATTTGATTCTTTGAAAATTATTTTAAGAATTCATTACACATTTA
GGCAAACAATACAAACAAATTTAGGGATATAAATATATAGATATGACAAATATTTTAATG
TATAAATTTCAAAGCTTTAAACAGCAAAAATTAATTGCTAATTTACTAAAAAAAGCTAAA
AGCGCTACTTAATTTGTTAAGAAATGAGAGAATTTCGTTAAAATATATTTTATTTTGCAA
ATTTCAAGCTATCAGAATCTAAATTTACTTATTTCTATTGAAAAAAATAGGTCAGAAAAT
AAACCCCCAAGGTTGAAAAGAAGGACAAGCCCAGAAAGACTCCTAAGGGTAGATCTTACA
AGAGAATCCTCTACAACAGAAGATATGCTCCTCACATCTTGGCCACTGATCCCAAGAAGA
GAAAGTCTCCCAACTGGCACGCTGGTAAGAAGGAAAAGATGGACGCTGCTGCCAATCCCG
TCAAGAAGGATTGA