Identifiers and Description

Gene Model Identifier

TTHERM_00037090

Standard Name

RPS29 (Ribosomal Protein of the Small subunit 29)

Aliases

PreTt14444 | 2.m02275 | 3825.m02816

Description

Homolog of yeast RPS29, human RPS29, bacterial RPS14

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• ribosome (IEA) | GO:0005840
• intracellular (IEA) | GO:0005622

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.9%

TetraMine Data

TTHERM_00037090

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Oxytricha	Contig22313.0.g6	1.000116773704384e-19	Ribosomal protein S14p/S29e
DictyBase	DDB_G0272308	1.999598840915195e-17	rps29 on chromosome: 2 positio n 1258878 to 1259135
SGD	YDL061C	3.001003044337619e-17	RPS29B Protein component of th e small (40S) ribosomal subuni t; nearly identical to Rps29Ap and has similarity to rat S29 and E. coli S14 ribosomal pro teins
WormBase	WBGene00004498	0.0000000000000030004923591262316	locus:rps-29 status:Confirme d UniProt:P90983 protein_i d:CCD61868.1

General Information

No Data fetched for General Information

Associated Literature

1. Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6

Sequences

>TTHERM_00037090(coding)
ATGCCTAACAAATTGTGGAGAACTCACCCCAGAAACTACGGTAAAGACTCTAAGGAATGC
AGAGTTTGTGGTGCCAGATAAGGTCTTATCACCAAGTATGAAATGATGACTTGCAGAAGA
TGCTTCAGAGAATAAGCTCCTCACATTGGTTTCGTCAAGTACAGATGA

>TTHERM_00037090(protein)
MPNKLWRTHPRNYGKDSKECRVCGARQGLITKYEMMTCRRCFREQAPHIGFVKYR

>TTHERM_00037090(gene)
AAGAAAAAAACTAAGAAAAAAGACAATAATCACATATTTTAACACCAATTCAAAATGCCT
AACAAATTGTGGAGAACTCACCCCAGAAACTACGGTAAAGACTCTAAGGAATGCAGAGTT
TGTGGTGCCAGATAAGGTCTTATCACCAAGTATGAAATGATGACTTGCAGAAGATGCTTC
AGAGAATAAGCTCCTCACATTGGTTTCGTCAAGGTAACATATAGCAATAGCAATTTAATC
AATCATATTTAATTTTAATCGATCAATAAATTATCATTCAATGAGTGTCAATTACCAAAA
CGTTTTACTAAATTAATTACCATCAAGTATTAATAGATAAAGTTAATAATAGAATTTAAG
TAGTGCCATAGTTTGTCTAATTATTAGAATTATCGGCCTTATTAAAGCTGTAAACATTTT
AAAATCGTCCAACAAATAAATAAAAAACAATTGATTAATGAATCGATCAGCCAAAAAGTT
AATTCCAAATAAATTAACTTTAAGAAAATCTACTTTAATTAAGCTAAATTGTTAGCTTGA
TTGAGTATAAATAAACAATTATGAAAGGATTAAAAAACCGAATGACAATCCATAGATTAA
ATCAAGGTTTGAGTTAAAGAAAGAGCCTTTACTAGCTTCTTAAACTGAAGTACTTAGCTT
TTAGAATGAGTGTAGTACTGACTTAAGTAAAAAAGAAATGAAATAAAGTTTCATGCATGC
ATGTATTCTTTTAAAGAAAAATAATAATTTGATTTATTTATTACAGAAAAAATCAAGGAA
CAGAGTTAAGCAAGCAAAAAAGGACTAAGTAGAGGATAAAAATAATAAGATAAAATAGCA
AATTATATAGAATCAATAATAATAACTAAAAGGAAGTAGAATGCACAAAATAAATCATTA
GAATTAGCTATTTATTTGAAAGAAGTAGAATAAAAAAATAAGTAAATCCATACCGCATAT
ATTATTCTCTGCATAGAGTAATTAACTTATGTATGGACAAATAAATTACCATTTCAATAA
TCCCTATAATATTTTTATATAATTTAGGATTCGCTAAATGGAAACAAAAAAATAATAATA
ATAACCAATCAATTAATATCAAAAGCATTCAAATTTTTAGTTAATTCAATTCAATGATTA
ATTCCTCCATTTACTTCTAATTAATTGATTATCCTAAATCCTAACTTAATCTGTTCAAAA
GCATTAATTAAAATGAGTTTGTTGGACTTTTAAAAAGTGATGAATGATATGATGTTTATT
TTTTGGCATGAAAAATAAAATAATTAGTTTACAATTTGGTGAGAAAGCACTCATTAATTC
ATTTAGAATGATAATTTTGATTTTATTTTTGAATATTAGTTTATTTTTAATTTAATGATA
ATTATTATAACAAACAGTACAGATGAAGAACCTTATGTAAACGGAGATTAGCAAAAATTT
AAAATATACTCAAAATATATCTATTGTATGTGAATAATAGAAATATAGATTTAAATTTAA
CTAATTGCTTCTTTATGTAAGCTAACTTGCATAATATATTATTACATATAGATAACTTTT
TATTTAAATCTGTTCTAACTTAATTCATCAAAATCATTTCAAAAAAACAGCCTTTCTCTT
TGTTTTATTCACCACTCTTTTCAATCTTAATCTTGGAGTATATATAAATTAATTTATGTT
TCTTAAATTAATTAATTAATTAATTTTCGACCAAAACAAAACACAAATATTTTTATCACT
CCTAAATATTAAAATGCAACAAAATTCAGCTAAACTAAATAAAACAAAGCAAAATATTAT
TCATTAATATTTCTAACAATTTTAGACAATTTGCACTAGAAAGTAAAAATAAAGAAATAA
ATAAATAAATAAAAACTTTCTATCTATTTTTCTATCTATCTATAAAGGTATCCTTAAACA
ACTTAAC