Identifiers and Description
Gene Model Identifier
TTHERM_00105330Standard Name
RPS28 (Ribosomal Protein of the Small subunit 28)Aliases
PreTt23033 | 7.m00482Description
RPS28 40S ribosomal protein S28e putative; Homolog of yeast RPS28- human RPS28;Genome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- ribosome (IEA) | GO:0005840
- intracellular (IEA) | GO:0005622
Molecular Function
- structural constituent of ribosome (IEA) | GO:0003735
Biological Process
- translation (IEA) | GO:0006412
Domains
- ( PF01200 ) ribosomal protein S28e
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.3%
TetraMine Data
TTHERM_00105330
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_00370.1 5.998312950603665e-35 ribosomal protein S28e contain
ing protein (69 aa)
Oxytricha Contig12436.0.g46 2.99851380290819e-19 Ribosomal protein S28e
SGD YOR167C 4.0009493637353324e-18 RPS28A Protein component of th
e small (40S) ribosomal subuni
t; nearly identical to Rps28Bp
and has similarity to rat S28
ribosomal protein
WormBase WBGene00004497 7.9993595954329e-16 locus:rps-28 40S ribosomal p
rotein S28 status:Confirmed
UniProt:Q95Y04 protein_id:
CCD66705.1
DictyBase DDB_G0285597 0.000000000000020000882446601127 rps28 on chromosome: 4 positio
n 3428530 to 3429424
General Information
No Data fetched for General Information
Associated Literature
- Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6
Sequences
>TTHERM_00105330(coding)
ATGAATACCGAAGAAACTACTAAGGCTAGAATTATGGATGTCCTCGGAAAGACTGGTTCC
AGAGGTGGTATTACCCAAGTTAGAGTCGTATTGATCAGTGGTAAGGAAGAAGGTAGATAA
CTTATTAGAAACGTCAAGGGTGCCTGCAGAGTCGGTGACGTCCTCGAACTTATGGAATGT
GAAAGAGAAGCCAGAAGATTAAGATGA>TTHERM_00105330(protein)
MNTEETTKARIMDVLGKTGSRGGITQVRVVLISGKEEGRQLIRNVKGACRVGDVLELMEC
EREARRLR>TTHERM_00105330(gene)
ATGAATACCGAAGAAACTACTAAGGCTAGAATTATGGATGTCCTCGGAAAGACTGGTAAT
TAATTTAAGATATGAATCACTTCAAATAGTGAACGCGAAAAATTTCCTGAAAAGTTTAGA
TGAAATTTTTGAAAATTAGTTGCCATTTCTCCATTTGAGGAGGGAGCATTATTAATTCAT
AATGCTCAAAATATATATTCATTTGAATACAAATAAAAGCGACTTTAATATGTTCAGTGA
TAGAAAAATGATTGAATTATCATAAAAGGAATAAAAAAATAAAATGGTTTTTTGGGAATT
TTCGCTTATCAACTAGATTTTGTGATGATTTTATTGATGAAATTAAAGAAATGAAAGAAG
GAAATTTTAATAATATTTTTATCTATTTTTATAGGTTCCAGAGGTGGTATTACCCAAGTT
AGAGTCGTATTGATCAGTGGTAAGGAAGAAGGTAGATAACTTATTAGAAACGTCAAGGGT
GCCTGCAGAGTCGGTGACGTCCTCGAACTTATGGAATGTGAAAGAGAAGCCAGAAGATTA
AGATGA