Identifiers and Description

Gene Model Identifier

TTHERM_01043090

Standard Name

RPS27 (Ribosomal Protein of the Small subunit 27)

Aliases

PreTt03242 | 208.m00035 | 3807.m00208

Description

Homolog of yeast RPS27, human RPS27;

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• intracellular (IEA) | GO:0005622
• ribosome (IEA) | GO:0005840

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 11%

TetraMine Data

TTHERM_01043090

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_20149.1	4.999934616708877e-52	ribosomal protein S27 (82 aa)
SGD	YKL156W	5.997739233660418e-28	RPS27A Protein component of th e small (40S) ribosomal subuni t; nearly identical to Rps27Bp and has similarity to rat S27 ribosomal protein
DictyBase	DDB_G0277635	9.997975313387782e-28	rps27 on chromosome: 2 positio n 8305176 to 8306165
WormBase	WBGene00004496	1.0004572433669413e-23	locus:rps-27 40S ribosomal p rotein S27 status:Confirmed UniProt:Q9TXP0 protein_id: CCD71974.1
Oxytricha	Contig4448.0.g28	9.998720540547892e-23	Ribosomal protein S27

General Information

No Data fetched for General Information

Associated Literature

1. Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6

Sequences

>TTHERM_01043090(coding)
ATGGAAAGAGATCTTTTAAACCCCATCTACGAAGAAGAAAAGCAAAAGAATAAGTTCAAG
AGACTTATCCAAGCTCCCAACTCTTACTTCATGGATGTTAAGTGTGCTCAATGCCAAAAC
ATCCAAATGATTTTCTCTAACGCTCAATCTACCATTATTTGTGAAAAGTGCTCTGCTATC
CTCTGCAAGCCCACTGGTGGTAAGGTTCAAATCTAAGCTGGTTGCGCCTTCAAGATTAAA
AACTGA

>TTHERM_01043090(protein)
MERDLLNPIYEEEKQKNKFKRLIQAPNSYFMDVKCAQCQNIQMIFSNAQSTIICEKCSAI
LCKPTGGKVQIQAGCAFKIKN

>TTHERM_01043090(gene)
ATGGAAAGAGATCTTTTAAACCCCATCTACGAAGAAGAAAAGCAAAAGAATAAGTTCAAG
AGACTTATCCAAGCTCCCAACTCTTACTTCATGGATGTTAAGTGTGCTCAATGCCAAAAC
ATCCAAATGATTTTCTCTAACGCTCAATCTACCATTATTTGTGAAAAGTAATTCACTCAA
GCATTCATTATTTTCATTAAAAAATAGTTTTGACTCAATCAAGCTCCAAATCAAATAAAT
AAAATGAATTTGGACAAAAGCTGCTTCCTCAATTTCAAGAGAAACTTAAAATAATTTTAA
TGTATTTTCAATAGCTAGCTAGCTTGCAATCGTTATCTCAAATTTACAAATAAATAGGAT
AACAAACAAACAATCAAAATAAACAAACCAATATTTTACACAATCAAATTTTTGTGAATG
TTGCAGAAAGTTACCAAACTGAGGCTATTATTTAAAATTTTAGGGATATTTAGTTTTGTT
TACATCCAGATGTATAGTAGCTTATTAATATAAAGCGTTCTAAAATTTAGAAATGCAAAA
CATTCTCTAATTTTATTCGAATTTTTAACTCTTTGCAATCGATTTTAAGTATCTAAATTT
ATAATTATTAAAAATTAAATAGGTGCTCTGCTATCCTCTGCAAGCCCACTGGTGGTAAGG
TTCAAATCTAAGCTGGTTGCGCCTTCAAGATTAAAAACTGA