Identifiers and Description

Gene Model Identifier

TTHERM_00454080

Standard Name

RPS22 (Ribosomal Protein of the Small subunit 22)

Aliases

PreTt15525 | 52.m00303 | 3811.m01051

Description

Homolog of yeast RPS22, bacterial RPS8;

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• ribosome (IEA) | GO:0005840
• intracellular (IEA) | GO:0005622

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 17.1%

TetraMine Data

TTHERM_00454080

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_15038.1	3.9984352235938583e-87	ribosomal protein S8 containin g protein (131 aa)
Oxytricha	Contig12805.0.g106	8.998258374026963e-65	Ribosomal protein S8
DictyBase	DDB_G0276457	5.002115178225629e-63	rps15a on chromosome: 2 positi on 6809160 to 6809552
SGD	YLR367W	2.0002571866765887e-62	RPS22B Protein component of th e small (40S) ribosomal subuni t; nearly identical to Rps22Ap and has similarity to E. coli S8 and rat S15a ribosomal pro teins
WormBase	WBGene00004491	4.000904604388404e-59	locus:rps-22 status:Confirme d UniProt:O17218 protein_i d:CCD62154.1
Stentor Coeruleus	SteCoe_35703	5.380186160021138e-32

General Information

No Data fetched for General Information

Associated Literature

1. Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6

Sequences

>TTHERM_00454080(coding)
ATGGTCAAGGTTAACATTTTGGCTGAATGCCTTAAGGATTTAGTTAATGCCGAAAAGATG
GGTAAGAAGCAAGTTCTCTTAAGACCCGTTTCCAAGGTCGTCCTCAAGTTCTTAAGAATT
ATGTAAAAGAACGGTTACATTGGTGAATTCGAAGTTATCGATGACCACAGATCCAAGAAG
GTCGTTGTTGAACTTATTGGCAGAATTAACAAATGCGGTGTTATTTCTCCCAGATATGAC
GTTCCTCTTGCTGACTTCGAAAAGTGGACTAACAATATCCTTCCCTCCAGACAATTCGGT
AATGTTGTTCTCACCACCACTTACGGTATTCTTACTCACGAAGAATGCAGAAAGAGACAC
ACTGGTGGCAAGATCCTCGGTTTCTTCTATTGA

>TTHERM_00454080(protein)
MVKVNILAECLKDLVNAEKMGKKQVLLRPVSKVVLKFLRIMQKNGYIGEFEVIDDHRSKK
VVVELIGRINKCGVISPRYDVPLADFEKWTNNILPSRQFGNVVLTTTYGILTHEECRKRH
TGGKILGFFY

>TTHERM_00454080(gene)
ATGGTCAAGGTTAACATTTTGGCTGAATGCCTTAAGGATTTAGTTAATGCCGAAAAGATG
GGTAAGAAGCAAGTTCTCTTAAGACCCGTTTCCAAGGTCGTCCTCAAGTTCTTAAGAATT
ATGTAAAAGAACGGTTACATTGGTGAATTCGAAGTTATCGATGACCACAGATCCAAGAAG
GTCGTTGTTGAACTTATTGGCAGAATTAACAAATGCGGTGTTATTTCTCCCAGATATGAC
GTTCCTCTTGCTGACTTCGAAAAGTGGACTAACAATATCCTTCCCTCCAGACAATTCGGT
AATGTTGTTCTCACCACCACTTACGGTATTCTTACTCACGAAGAATGCAGAAAGAGACAC
ACTGGTGGCAAGATCCTCGGTTTCTTCTATTGA