Identifiers and Description

Gene Model Identifier

TTHERM_00992760

Standard Name

RPS20 (Ribosomal Protein of the Small subunit 20)

Aliases

PreTt18338 | 186.m00054

Description

RPS20 40S ribosomal protein S20; Homolog of yeast RPS20- human RPS20- bacterial RPS10

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• ribosome (IEA) | GO:0005840
• intracellular (IEA) | GO:0005622

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

• ( TIGR01046 ) ribosomal protein S10
• ( TIGR01049 ) ribosomal protein S10
• ( PF00338 ) ribosomal protein S10p/S20e

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.1%

TetraMine Data

TTHERM_00992760

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_04375.1	7.99824663097029e-79	ribosomal protein S10 containi ng protein (121 aa)
Oxytricha	Contig381.1.g57	1.0000633497921574e-36	Ribosomal protein S10p/S20e
WormBase	WBGene00004489	2.0003218023735366e-33	locus:rps-20 status:Confirme d UniProt:Q8WQA8 protein_i d:CAD21665.1
DictyBase	DDB_G0278429	4.999723464643358e-28	rps20 on chromosome: 3 positio n 871775 to 872149
SGD	YHL015W	1.9993007828132465e-27	RPS20 Protein component of the small (40S) ribosomal subunit ; overproduction suppresses mu tations affecting RNA polymera se III-dependent transcription ; has similarity to E. coli S1 0 and rat S20 ribosomal protei ns
Stentor Coeruleus	SteCoe_32941	6.305116760146989e-16

General Information

No Data fetched for General Information

Associated Literature

1. Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6

Sequences

>TTHERM_00992760(coding)
ATGAAGACAGAAAAAGAAGAAAAGATAATGAAATTAACAAAAGGTAAATTAAGCTAAAAA
AGAAAAGAAAAAATAGGCAGAAGCTAAATTAAAAAAGAAAAAGAAAAAATTAAATTAATA
AAAGACAAAATCTAAAAAATTAATATAAAGATGGACGCTACTAAGGAAACCAAGAAGGGA
GAAGAAGAAGTTAAGAAGGTTAGAGTTAGAATCACCTTGACTTGCAAGAACTTAAAGTCT
GTTGAAAAGGCCACCTCTGAAATCGTCTCCAGAGCCAAGAAGACTGAATAAGTCGAAGTT
AAGGGACCCGTCAGAATGCCCACTAAGACTCTCGTCATCACCGTCAGAAAGTCTCCTTGT
GGTGAAGGTTCTAAGACCTGGGACAGATTCGAAATGAGAATCTACAAGAGAATTATTGAT
CTTACTTGCAACGTTCCTGATGTTAAGACCATCACCAACTTCAGAATCGACCCCGGTGTT
GAAATCGAACTTACCATGACTGCCGACTAATGA

>TTHERM_00992760(protein)
MKTEKEEKIMKLTKGKLSQKRKEKIGRSQIKKEKEKIKLIKDKIQKINIKMDATKETKKG
EEEVKKVRVRITLTCKNLKSVEKATSEIVSRAKKTEQVEVKGPVRMPTKTLVITVRKSPC
GEGSKTWDRFEMRIYKRIIDLTCNVPDVKTITNFRIDPGVEIELTMTADQ

>TTHERM_00992760(gene)
ATGAAGACAGAAAAAGAAGAAAAGATAATGAAATTAACAAAAGGTAAATTAAGCTAAAAA
AGAAAAGAAAAAATAGGCAGAAGCTAAATTAAAAAAGAAAAAGAAAAAATTAAATTAATA
AAAGACAAAATCTAAAAAATTAATATAAAGATGGACGCTACTAAGGAAACCAAGAAGGGA
GAAGAAGAAGTTAAGAAGGTTAGAGTTAGAATCACCTTGACTTGCAAGAACTTAAAGTCT
GTTGAAAAGGCCACCTCTGAAATCGTCTCCAGAGCCAAGAAGACTGAATAAGTCGAAGTT
AAGGGACCCGTCAGAATGCCCACTAAGACTCTCGTCATCACCGTCAGAAAGTCTCCTTGT
GGTGAAGGTTCTAAGACCTGGGACAGATTCGAAATGAGAATCTACAAGAGAATTATTGAT
CTTACTTGCAACGTTCCTGATGTTAAGACCATCACCAACTTCAGAATCGACCCCGGTGTT
GAAATCGAACTTACCATGACTGCCGACTAATGA