Identifiers and Description

Gene Model Identifier

TTHERM_00823670

Standard Name

RPS19 (Ribosomal Protein of the Small subunit 19)

Aliases

PreTt20437 | 141.m00094 | 3682.m00028

Description

Homolog of yeast RPS19, human RPS19;

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• intracellular (IEA) | GO:0005622
• ribosome (IEA) | GO:0005840

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

• ( PF01090 ) ribosomal protein S19e
• ( PF07877 ) Protein of unknown function (DUF1661)

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.9%

TetraMine Data

TTHERM_00823670

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_18161.1	9.001891882164677e-105	ribosomal protein S19e contain ing protein (155 aa)
DictyBase	DDB_G0279207	2.0008113830639685e-30	rps19 on chromosome: 3 positio n 1760514 to 1760960
Oxytricha	Contig11050.0.g68	8.00089003463867e-30	Ribosomal protein S19e
SGD	YNL302C	1.9993007828132465e-27	RPS19B Protein component of th e small (40S) ribosomal subuni t, required for assembly and m aturation of pre-40 S particle s; mutations in human RPS19 ar e associated with Diamond Blac kfan anemia; nearly identical to Rps19Ap
WormBase	WBGene00004488	3.99801309251602e-27	locus:rps-19 40S ribosomal p rotein S19 status:Confirmed UniProt:O18650 protein_id: CAB04689.1
Stentor Coeruleus	SteCoe_8486	1.1548224173015786e-17

General Information

No Data fetched for General Information

Associated Literature

1. Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6

Sequences

>TTHERM_00823670(coding)
ATGAGCAATAACCAAAGTTTCTTCACCGTCAAGGACGTCGCCGCCGCTGACTTCATTAGA
GAATATGCTTCTCACCTCAAGAAGGCTAACAAGCTCTCTATCCCCGAATTCACTCAATGG
ACCACCACCTCTGTTGCTAGAGAATTGGCTCCTCAAGATAGCGACTGGGTTTATATTAGA
ACTGCCGCCTTAGCCAGAAAGGTTTACCTCAAGCCCCACACTGGTATCTCTACCCTCAAG
CACATTTTCGGTTCCAACAAGGACAGAGGTAACTTGAGAAACAAGCACCAAGCTTGCCAC
GGTAAGATCCTCAGATGGGCTCTTAAGTCTCTTGAAGATTTGAAGATCATCAGAAAGGAC
AAGAACTCTGCTACCAAGAAGTTCTCCAGAGTTATTACCAAGGAAGGTATGACTGAACTC
AACAGAATTGCTACCCAAATTGCTATCAAGCAAAGACAAGCTAAGTGA

>TTHERM_00823670(protein)
MSNNQSFFTVKDVAAADFIREYASHLKKANKLSIPEFTQWTTTSVARELAPQDSDWVYIR
TAALARKVYLKPHTGISTLKHIFGSNKDRGNLRNKHQACHGKILRWALKSLEDLKIIRKD
KNSATKKFSRVITKEGMTELNRIATQIAIKQRQAK

>TTHERM_00823670(gene)
ATGAGCAATAACCAAAGTTTCTTCACCGTCAAGGACGTCGCCGCCGCTGACTTCATTAGA
GAATATGCTTCTCACCTCAAGAAGGCTAACAAGCTCTCTATCCCCGAATTCACTCAATGG
ACCACCACCTCTGTTGCTAGAGAATTGGCTCCTCAAGATAGCGACTGGGTTTATATTAGA
ACTGCCGCCTTAGCCAGAAAGGTTTACCTCAAGCCCCACACTGGTATCTCTACCCTCAAG
CACATTTTCGGTTCCAACAAGGACAGAGGTAACTTGAGAAACAAGCACCAAGCTTGCCAC
GGTAAGATCCTCAGATGGGCTCTTAAGTCTCTTGAAGATTTGAAGATCATCAGAAAGGAC
AAGAACTCTGCTACCAAGAAGTTCTCCAGAGTTATTACCAAGGAAGGTATGACTGAACTC
AACAGAATTGCTACCCAAATTGCTATCAAGCAAAGACAAGCTAAGTGA