Identifiers and Description
Gene Model Identifier
TTHERM_00131110Standard Name
RPS18 (Ribosomal Protein of the Small subunit 18)Aliases
PreTt24232 | 10.m00281 | 3698.m00005Description
RPS18 40S ribosomal protein S18 putative; Homolog of yeast RPS18- human RPS18- bacterial RPS13Genome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- ribosome (IEA) | GO:0005840
- intracellular (IEA) | GO:0005622
Molecular Function
- structural constituent of ribosome (IEA) | GO:0003735
- RNA binding (IEA) | GO:0003723
Biological Process
- translation (IEA) | GO:0006412
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.7%
TetraMine Data
TTHERM_00131110
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_05676.1 1.0003602942354155e-110 ribosomal protein S13p/S18e co
ntaining protein (214 aa)
WormBase WBGene00004487 9.999353957415832e-59 locus:rps-18 status:Confirme
d UniProt:O18240 protein_i
d:CAB16517.1
SGD YML026C 1.0000099287337047e-53 RPS18B Protein component of th
e small (40S) ribosomal subuni
t; nearly identical to Rps18Ap
and has similarity to E. coli
S13 and rat S18 ribosomal pro
teins
Oxytricha Contig19625.0.g104 4.999934616708877e-52 Ribosomal protein S13/S18
DictyBase DDB_G0276415 2.000214949834694e-50 rps18 on chromosome: 2 positio
n 6891141 to 6891920
Stentor Coeruleus SteCoe_37993 3.532628572200807e-24
General Information
No Data fetched for General Information
Associated Literature
- Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6
Sequences
>TTHERM_00131110(coding)
ATGTCCTTCGTTATCGAAAAAGAATCTGACTTCAAGTACATCCATCGTATCCTCAACACC
AACATCGATGGTAAAAGAATCACCCCTATTGCCTTAACCGGTATTAGAGGTATCGGCAGA
AGATTCGCTTACATCATCTGCAAGGTTTTGAAGATCGATCCCAACGCCAGAGCTGGTTTA
TTAACCGAAGATTAATGCAACAAGATTACCGATCTCATCGCTGATCCCGAAGCTCACGGT
ATCCCCACCTGGTTGCTCAACAGAATTAATGATTTCAAGGATGGTAAAAACTACCAAATG
GCTTCTAACACCTTAGATACCAAGATGAGAGAAGATCTTGAAAGACTCAAGAAAATTAAG
TCTCACAGAGGTCTTAGACATTTCTGGGGTCTCAAGGTTAGAGGTCAACACACCAAGACC
AGTGGTAGACACGGTGTCGTTTGCGGTGTTGTCAGAAAGAACAAATGA>TTHERM_00131110(protein)
MSFVIEKESDFKYIHRILNTNIDGKRITPIALTGIRGIGRRFAYIICKVLKIDPNARAGL
LTEDQCNKITDLIADPEAHGIPTWLLNRINDFKDGKNYQMASNTLDTKMREDLERLKKIK
SHRGLRHFWGLKVRGQHTKTSGRHGVVCGVVRKNK>TTHERM_00131110(gene)
ATGTCCTTCGTTATCGAAAAAGAATCTGACTTCAAGTACATCCATCGTATCCTCAACACC
AACATCGATGGTAAAAGAATCACCCCTATTGCCTTAACCGGTATTAGAGGTATCGGCAGA
AGATTCGCTTACATCATCTGCAAGGTTTTGAAGATCGATCCCAACGCCAGAGCTGGTTTA
TTAACCGAAGATTAATGCAACAAGATTACCGATCTCATCGCTGATCCCGAAGCTCACGGT
ATCCCCACCTGGTTGCTCAACAGAATTAATGATTTCAAGGATGGTAAAAACTACCAAATG
GCTTCTAACACCTTAGATACCAAGATGAGAGAAGATCTTGAAAGACTCAAGAAAATTAAG
TCTCACAGAGGTCTTAGACATTTCTGGGGTCTCAAGGTTAGAGGTCAACACACCAAGACC
AGTGGTAGACACGGTGTCGTTTGCGGTGTTGTCAGAAAGAACAAATGA