Identifiers and Description
Gene Model Identifier
TTHERM_00762890Standard Name
RPS17 (Ribosomal Protein of the Small subunit 17)Aliases
PreTt03280 | 126.m00078 | 3740.m00005Description
Homolog of yeast RPS17, human RPS17Genome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- ribosome (IEA) | GO:0005840
- intracellular (IEA) | GO:0005622
Molecular Function
- structural constituent of ribosome (IEA) | GO:0003735
Biological Process
- translation (IEA) | GO:0006412
Domains
- ( PF00833 ) ribosomal S17
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.2%
TetraMine Data
TTHERM_00762890
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_16004.1 3.001096210761825e-82 ribosomal S17 family protein (
129 aa)
Oxytricha Contig1018.1.g95 2.9989272749380808e-50 Ribosomal S17
SGD YML024W 8.001824328206442e-49 RPS17A Ribosomal protein 51 (r
p51) of the small (40s) subuni
t; nearly identical to Rps17Bp
and has similarity to rat S17
ribosomal protein
WormBase WBGene00004486 7.000028900755185e-46 locus:rps-17 40S ribosomal p
rotein S17 status:Confirmed
UniProt:O01692 protein_id:
CCD67616.1
DictyBase DDB_G0290141 1.0003292389192957e-45 rps17 on chromosome: 5 positio
n 3706333 to 3707026
Stentor Coeruleus SteCoe_37162 7.095474162284704e-23
General Information
No Data fetched for General Information
Associated Literature
- Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6
Sequences
>TTHERM_00762890(coding)
ATGGGTAGAGTTAGAACTAAAACTGTTAAGAGAGCCGCCAAGAGCTTGATTGAACATTAC
TACAGCAAGTTAACCAACGATTTCCACTTCAATAAGAAGATCCTTTCCGAAGTCGCTCAA
GTCCCCTCCAAGAGACTTAGAAACAAGATCGCTGGTTTCGCTACTCACTTGATGAAGAGA
ATCCAAAAGGGTCCCGTCAGAGGTATTTCTCTCAAGGTCTAAGAAGAAGAAAGAGAAAGA
AGACTTGACTACGTCCCCGAAAAGTCTATTATTGATATTGAAAAGGTTACCATTGATAAC
GAAACCAAGGAAATGCTCAAAAAGCTTGGTTACTAAAACATCCCTGGTCTTGTTAGCGCT
TCCGCTCCTGCCAACAAGAAGAGAGGATAATGA>TTHERM_00762890(protein)
MGRVRTKTVKRAAKSLIEHYYSKLTNDFHFNKKILSEVAQVPSKRLRNKIAGFATHLMKR
IQKGPVRGISLKVQEEERERRLDYVPEKSIIDIEKVTIDNETKEMLKKLGYQNIPGLVSA
SAPANKKRGQ>TTHERM_00762890(gene)
ATGGGTAGAGTTAGAACTAAAACTGTTAAGAGAGCCGCCAAGAGCTTGATTGAACATTAC
TACAGCAAGTTAACCAACGATTTCCACTTCAATAAGAAGATCCTTTCCGAAGTCGCTCAA
GTCCCCTCCAAGAGACTTAGAAACAAGATCGCTGGTTTCGCTACTCACTTGATGAAGAGA
ATCCAAAAGGGTCCCGTCAGAGGTATTTCTCTCAAGGTCTAAGAAGAAGAAAGAGAAAGA
AGACTTGACTACGTCCCCGAAAAGTCTATTATTGATATTGAAAAGGTTACCATTGATAAC
GAAACCAAGGAAATGCTCAAAAAGCTTGGTTACTAAAACATCCCTGGTCTTGTTAGCGCT
TCCGCTCCTGCCAACAAGAAGAGAGGATAATGA