Identifiers and Description
Gene Model Identifier
TTHERM_00706300Standard Name
RPS16 (Ribosomal Protein of the Small subunit 16)Aliases
PreTt26886 | 111.m00107 | 3744.m00027Description
RPS16 ribosomal protein S9; Homolog of yeast RPS16- human RPS16- bacterial RPS9;Genome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- ribosome (IEA) | GO:0005840
- intracellular (IEA) | GO:0005622
Molecular Function
- structural constituent of ribosome (IEA) | GO:0003735
Biological Process
- translation (IEA) | GO:0006412
Domains
- ( PF00380 ) ribosomal protein S9
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.6%
TetraMine Data
TTHERM_00706300
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_17730.1 7.001881202137212e-149 ribosomal protein S9 containin
g protein (225 aa)
SGD YMR143W 4.997966074691795e-65 RPS16A Protein component of th
e small (40S) ribosomal subuni
t; identical to Rps16Bp and ha
s similarity to E. coli S9 and
rat S16 ribosomal proteins
DictyBase DDB_G0284093 5.0012639607461234e-61 rps16 on chromosome: 4 positio
n 1558362 to 1559293
WormBase WBGene00004485 4.000223764421475e-57 locus:rps-16 40S ribosomal p
rotein S16 status:Confirmed
UniProt:Q22054 protein_id:
CAB01658.1
Oxytricha Contig21935.0.g16 6.997794455893953e-54 Ribosomal protein S9/S16
Stentor Coeruleus SteCoe_8987 3.221340285992516e-27
General Information
No Data fetched for General Information
Associated Literature
- Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6
Sequences
>TTHERM_00706300(coding)
ATGAAATATAATAATTCTTAGCAAAATAGAATGAAAAAAGATGAGAGAACTACTAAGTTT
AATAAAGACTAAATTAATTAAGGCGAATTAATTTTTAGATAGGAAGGAAAGGATAATAAA
AAGTAAAAGGGAAAAATAAAGGACTAATTCAAAGATACTGTTGGAAGGTCGAAAGCATAA
TTAAAAGAAAAAAGGATAAAAATTAATCTAAAATCAAATATAAAAAACAAAGACATAAGT
AAAGAAATGAGCCAATAAAAGCCTCAATTAGTCCAAACTTTCGGCAGAAAGAAAAACGCC
GTCGCTGTTGCCTCCGTCAGACCTGGTAAGGGTCTCCTCAAGGTCAACGGTTCCCCCATT
GATATGATCAACCCCTAGATCCTCCAAGCTAAGATCTACGAACCCATCCTCTTACTCGGT
CAATAGAAGTTCGCTAACCTCGACATTAGAATCAGAGTTAGAGGTTCTGGTTACACCTCT
TAAGTCTATGCCATCAGACAAGCTCTCTCCAAGGGTATCGTTGCTTACCACGCTAAATAC
GTCGATGAAAACTCCAAGAGAGAAATCAAGGAATAATTGATGCAATACGACAGATCCCTC
TTGGTTGCCGATCCCAGAAGAATGGAACCCAAGAAGTGTGGTGGTAGAGGTGCCAGATCT
AAAATGCAAAAGGCTTACAGATGA>TTHERM_00706300(protein)
MKYNNSQQNRMKKDERTTKFNKDQINQGELIFRQEGKDNKKQKGKIKDQFKDTVGRSKAQ
LKEKRIKINLKSNIKNKDISKEMSQQKPQLVQTFGRKKNAVAVASVRPGKGLLKVNGSPI
DMINPQILQAKIYEPILLLGQQKFANLDIRIRVRGSGYTSQVYAIRQALSKGIVAYHAKY
VDENSKREIKEQLMQYDRSLLVADPRRMEPKKCGGRGARSKMQKAYR>TTHERM_00706300(gene)
ATGAAATATAATAATTCTTAGCAAAATAGAATGAAAAAAGATGAGAGAACTACTAAGTTT
AATAAAGACTAAATTAATTAAGGCGAATTAATTTTTAGATAGGAAGGAAAGGATAATAAA
AAGTAAAAGGGAAAAATAAAGGACTAATTCAAAGATACTGTTGGAAGGTCGAAAGCATAA
TTAAAAGAAAAAAGGATAAAAATTAATCTAAAATCAAATATAAAAAACAAAGACATAAGT
AAAGAAATGAGCCAATAAAAGCCTCAATTAGTCCAAACTTTCGGCAGAAAGAAAAACGCC
GTCGCTGTTGCCTCCGTCAGACCTGGTAAGGGTCTCCTCAAGGTCAACGGTTCCCCCATT
GATATGATCAACCCCTAGATCCTCCAAGCTAAGATCTACGAACCCATCCTCTTACTCGGT
CAATAGAAGTTCGCTAACCTCGACATTAGAATCAGAGTTAGAGGTTCTGGTTACACCTCT
TAAGTCTATGCCATCAGACAAGCTCTCTCCAAGGGTATCGTTGCTTACCACGCTAAGTAA
TTAAACAATATCATTTATTTAGAAATGTTTTGAAATGCAAACGAGATTGATTGATTGATT
AATTGACTGATCATTTACCATTCAATAAAAAATCAATACAATTTTGCTCCTTTTAGCATT
CTTATTAAATCCAGATTAAAATAAAAAAGATAAAAGTCATTTTTATTACCATCAATCATA
ATTTTATTATTTAACTCAATATTTTTACGGGAATGCGCATGTAGTTTGCTACAAATTACT
CAAAAAGGAAAATAATAACTAACTATTAGCTTGAATTTAGATTAGTAGATATCTATAAAT
ATAAAGCAAATCTAGCAGTTTAGTTGAATTTAATCAGCTAATAAGTTAACAAATCTAGGC
AAAGAACTTTCAAATATTAATATACTAATATAGAGGTTCTAAAAATAAAGGAATTACAAA
TGTATTTCTTAGATACTCTTGCAAAATCTAATAGCAAGGTTAGGAAACGAAGAATAACAA
AAAATAAAGCATAGTAAACTCCTAAAATAATTGATATTCTGGATAAGATTCATAAATATT
TATCAATAGCGATAAAAGAGCAAATGATAGAGCAATTATTCAGAAATTTATAAAAAAACA
AAAGGAAAATTAAAATTATTAAACTAATAAGGAGTTAGTATGATGTAAATAAGTCTAAAA
AGGATAGCTTGAGTAATTTAAAAAGCTGCTACTTAAAATTTTTTAGGATCCAAAGAAAAG
TTTATGTTTGAGTTAAATAAATAAATAGCTAATTACAAGGCAAATTACTCAATAAATGTA
TCATAAATCTTAAATAAGATTATTGTTCAAAGCAAATAACGAGTATTTTAAAATTATGAA
AGATTGATTGGTTTTAAATCTGCAATAAAAGCTAAGGAGAAGTTTAGCAAATTTTATAAA
AAAAAAACATATTTTAAATTTTCAAAACTCATTATTTATTTTTTGATTTACTAACTAACT
TACTAATTAAAAAATTTAGATACGTCGATGAAAACTCCAAGAGAGAAATCAAGGAATAAT
TGATGCAATACGACAGATCCCTCTTGGTTGCCGATCCCAGAAGAATGGAACCCAAGAAGT
GTGGTGGTAGAGGTGCCAGATCTAAAATGCAAAAGGCTTACAGATGA