Identifiers and Description
Gene Model Identifier
TTHERM_00773330Standard Name
RPS13 (Ribosomal Protein of the Small Subunit 13)Aliases
PreTt04424 | 128.m00102 | 3676.m00027Description
RPS13 40S ribosomal protein S13; Homolog of yeast RPS13- human RPS13- bacterial RPS15;Genome Browser (Macronucleus)
![]()
Genome Browser (Micronucleus)
![]()
Gene Ontology Annotations
Cellular Component
- ribosome (IEA) | GO:0005840
- intracellular (IEA) | GO:0005622
Molecular Function
- structural constituent of ribosome (IEA) | GO:0003735
Biological Process
- translation (IEA) | GO:0006412
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 11.8%
TetraMine Data
TTHERM_00773330
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_17649.1 4.001242549923285e-107 ribosomal protein S15 containi
ng protein (200 aa)
SGD YDR064W 2.0007889996237956e-71 RPS13 Protein component of the
small (40S) ribosomal subunit
; has similarity to E. coli S1
5 and rat S13 ribosomal protei
ns
WormBase WBGene00004482 6.997942222381785e-66 locus:rps-13 40S ribosomal p
rotein S13 status:Confirmed
UniProt:P51404 protein_id:
CCD63229.1
Oxytricha Contig5219.0.1.g44 6.001629673589058e-65 Ribosomal S13/S15 N-terminal d
omain
DictyBase DDB_G0284533 7.997908857293895e-55 rps13 on chromosome: 4 positio
n 2127182 to 2127908
Stentor Coeruleus SteCoe_23264 1.462486227251231e-31
General Information
No Data fetched for General Information
Associated Literature
- Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6
Sequences
>TTHERM_00773330(coding)
ATGGGTCGTATGCAAATGAAAGGTAAAGGTAAGGGTATCTCCGGAAGTGCCCTCCCCTTC
AAGAGAAGATCTCCTAAGTGGCTCCACATGACTCCTTCTACTGTCGTTGACCTCTCCGTC
AAGTTAGCCAAGAAGGGTCTTACCCCCTCTCAAATTGGTGTTATCCTCAGAGATCAACAC
GGTATTCCCCAAGTTAGATTCTTGACTGGTTAAAAGATCCTCAGAATCCTCAAGAAGAAC
GGTTGTGCTCCTCAACTCCCCGAAGATCTTTACTTCTTGATCAAGAAGGCTCTCTCCATC
AGAAAGCACTTGGAAAAGAACAGAAAGGACAAGGACTCTAAGTACAGACTTATTCTTGTT
GAATCTAGAATCCACAGACTCTCTAGATACTACAAGCTCAACCAAAAGCTCCCCCCTAAA
TGGAAATACAACGCTCAAACTGCTTCTGCTTTAGTTCAATGA>TTHERM_00773330(protein)
MGRMQMKGKGKGISGSALPFKRRSPKWLHMTPSTVVDLSVKLAKKGLTPSQIGVILRDQH
GIPQVRFLTGQKILRILKKNGCAPQLPEDLYFLIKKALSIRKHLEKNRKDKDSKYRLILV
ESRIHRLSRYYKLNQKLPPKWKYNAQTASALVQ>TTHERM_00773330(gene)
ATGGGTCGTATGCAAATGAAAGGTAAAGGTAAGGGTATCTCCGGAAGTGCCCTCCCCTTC
AAGAGAAGATCTCCTAAGTGGCTCCACATGACTCCTTCTACTGTCGTTGACCTCTCCGTC
AAGTTAGCCAAGAAGGGTACACATTTTTTCAAATATTTTTATTATAAATCATCAATCAAT
CAATATTAACATAAATTCGCTCATTTTATATTTCGAAAGCTATTCAAACATCAAAACTAA
ACGACTGCTACGTTAATAAATTACATTAAAGTTAAAAGTATAAAAATTATTAACTAAAAT
CTATTTTAAGAAAAGAATAAACACTATAGTAATTATAAACATAAAATGCTTTAAATATTA
AATAAAAAATTAACACCTTCAAAAATAGATTGAGCCTTTACATTAGCTCAAAATGGTATT
TAATCAAAATGTGAATAATGAGGTAAATAATCTAAACAATTTTTGAATAAATTCAAAAAA
AGTATTTTCGCTAAAGGTCGTATCATCAGCGATCACGAGCGTTTCATTTACCTTATCTAC
TTCTTCCAGGTTCTTCAAATACCTCCAAGAATTAATCAAATAAATAATTAGCATTCTCTC
TCTCTAATTTTAGATAGGATTAGACGTTAACCTGATGATAATAGTTGCACTAAAAATTAA
ATTTAGGAATTGCAAGCAATTAAAATTTATTAAAGCTGGTTTCCTTTAGCGATTAGAGAA
TAAGTTGAAATAAGGAAGATCATAGCTATCCATCTGAATACATTTACTATTTATATCTTA
AGAAATAGTATTTGAAGTATAAATTTAGTTCCAAAAGCTAAATAATAACTAAATAAATAA
ATAAACAACCAAACAAAATACAGATTTAGCGAAAGATATGTTTTAAATAAATATTAAATT
CACTAAATATTTTAAATGCCGTTAAATGGTAGGCAAGATATAATTAACTAAATAAATCGC
CAATAGTATATGAATTGCGAATTAAAGATTTATAATACTAAATTTGTGCAATACTTCCAA
AAGATTTATGAATTCTTATTGAAATTTTTATTGGATTTGAATGTTAAAGAGCATAAAGCT
ATATATAATCCATCCTTAACAGTTAAGAATAGCTTATCAACAAATTTTGAAATAAAAATG
AATAAATGAATGAAAAATAGTTGAGAATATTTTTTGATAAATTTGATAAATAGTTAGTTG
TAAAATAATAAGAAAGCAGATCATGTTATTTATTGTTTGATAGCTTGCTACCCAAACAAA
ATGAGCTGATTGATTAGAATGATTTAATAAATAAATAAAATATTTATCTTCTCTTAATAT
CAAATAGGTCTTACCCCCTCTCAAATTGGTGTTATCCTCAGAGATCAACACGGTATTCCC
CAAGTTAGATTCTTGACTGGTTAAAAGATCCTCAGAATCCTCAAGAAGAACGGTTGTGCT
CCTCAACTCCCCGAAGATCTTTACTTCTTGATCAAGAAGGCTCTCTCCATCAGAAAGCAC
TTGGAAAAGAACAGAAAGGACAAGGACTCTAAGTACAGACTTATTCTTGTTGAATCTAGA
ATCCACAGACTCTCTAGATACTACAAGCTCAACCAAAAGCTCCCCCCTAAATGGAAATAG
TAAAAATTTAATTTAATTAATTAATTCTACTTTAACTTAATTCATAAAAAATTAAATATT
AACAACAACTTTTATAAAAAATAGCAACGCTCAAACTGCTTCTGCTTTAGTTCAATGA