Identifiers and Description
Gene Model Identifier
TTHERM_01109770Standard Name
RPS11 (Ribosomal Protein of the Small subunit 11)Aliases
239.m00049 | PreTt17947 | 3802.m00167Description
RPS11 40S ribosomal protein S11 putative; Homolog of yeast RPS11- human RPS- bacterial RPS17;Genome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- ribosome (IEA) | GO:0005840
- intracellular (IEA) | GO:0005622
Molecular Function
- structural constituent of ribosome (IEA) | GO:0003735
Biological Process
- translation (IEA) | GO:0006412
Domains
No Data fetched for Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 9.9%
TetraMine Data
TTHERM_01109770
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_20537.1 2.0005752503420762e-105 ribosomal protein S17 containi
ng protein (158 aa)
Oxytricha Contig22520.0.g95 6.997568408582301e-83 Ribosomal protein S17
DictyBase DDB_G0282601 3.998648822114894e-70 rps11 on chromosome: 3 positio
n 5991308 to 5992503
SGD YDR025W 8.001396889359552e-66 RPS11A Protein component of th
e small (40S) ribosomal subuni
t; identical to Rps11Bp and ha
s similarity to E. coli S17 an
d rat S11 ribosomal proteins
WormBase WBGene00004480 7.997908857293895e-55 locus:rps-11 status:Confirme
d UniProt:Q20206 protein_i
d:CAA97792.1
Stentor Coeruleus SteCoe_5449 1.8048513878454153e-35
General Information
No Data fetched for General Information
Associated Literature
- Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6
Sequences
>TTHERM_01109770(coding)
ATGGATACTCAAATTCAAAGAGCTTACTAAAAACAAGACGGTGTTTTCTTAAACTCTAAG
AAGCTTTTGGCTAAGAAGACTTCTGCTGGTGTTAGATACTACAAGAACATCGGTTTGGGC
TTCAAGACTCCTAAGGAAGCTATTGAAGGTACCTACGTCGATAAGAAGTGCCCCTTCACC
TCCAACCTTTCTATTAGAGGAAAGATCATTAAGGGTTTAGTCATTTCCACCAAGATGAAC
AGAACCGTTATCATCAGAAGAGATTACCTCCACTATGTCAGAAAATACAACAGATATGAA
AAGAGACACAGAAACATCCCCGTCCACATCTCCCCCTGTTTCTCCGTCAAGGAAGGTGAT
ATCCTCGTTGCTGGTCAATGCAGACCCATCTCCAAAACCGTCAGATTCAACGCCCTCTAA
GTTGTTCCTAACGAAATTATTGGTTCTGTCAGAAAATAATTCCTCCTTTTCTGA>TTHERM_01109770(protein)
MDTQIQRAYQKQDGVFLNSKKLLAKKTSAGVRYYKNIGLGFKTPKEAIEGTYVDKKCPFT
SNLSIRGKIIKGLVISTKMNRTVIIRRDYLHYVRKYNRYEKRHRNIPVHISPCFSVKEGD
ILVAGQCRPISKTVRFNALQVVPNEIIGSVRKQFLLF>TTHERM_01109770(gene)
ATGGATACTCAAGTGAGATATTTTTCTTTTTTAATTTTAAATTAGAATTTCTTTTTATAA
ATATCTCGCTGACTAACTCTATAACTTCAAAAGAGTAAATATAAAATGAAAATGAAAAAA
ATAAATCGCTTCAAATAGGTTAAATTGCAAATTCAGCAAGCAGCTATATTAATTTTACGC
TCAATTTTAGATTAAGCCATTTATTTATTTTACTCTATTGAATAATGATTAGTCGCGAGA
AAAATGAAATTTTCCAAATTAAAACCGAAAATGGAAAAATTACCAATTTAATGCTCAATT
TCGCTAAAACAATAAATTAATATCATTTTAATAATTCTACAGATTCAAAGAGCTTACTAA
AAACAAGACGGTGTTTTCTTAAACTCTAAGAAGCTTTTGGCTAAGAAGACTTCTGCTGGT
GTTAGATACTACAAGAACATCGGTTTGGGCTTCAAGACTCCTAAGGAAGCTATTGAAGGT
ACCTACGTCGATAAGAAGTGCCCCTTCACCTCCAACCTTTCTATTAGAGGAAAGATCATT
AAGTATGATACAGTTTATATAAAATTAAAAAACCCTAAAACAAAATTATCTATATTAACA
ATAATTATGCTTCTAAATATATTTTCTGCTCATTAACGCTCAGCTTTTGTAGCACATATG
TTTGATAATAAGCGATCTTCTAAAGCATTTATTATAGAAGGAGTCAAATATGAAATAAAT
AAAAATAGGATTGAAAAATTTAAGGGATTGAATAGTTTTATTAACATTTAATAGAATACA
GTATATCTATCCAATAACAAGTATTTAGCCTAGTATATAGCTCAAAAAAATTAAAGCATA
GATATAAAAAATAATATAATGAATACAGATTGATTTTTAGGCTTTTGAAATTCACTTAAG
TATTTTAAAAATGACTTAATAAAAGCATCCGATCAATCGATGGATGATGATACCTAACAG
AAAAAATGATTAGCACAAAAAAAAAATATTTTTTTGCTTTAAACATAAAAGGAAATCATA
GGAAAAAGCAAATATATGAATAAAGAAAGAATGCCAATTATAACTTAAAATTCTGATCGC
ATATTTTTATCAATAAAAATATAAATATATTAAATACTCGTAGAAATTAATAAATGAATG
AATAAATCAAAGAATAAGCAGAAGGATATCTTTTATTGTTACATATAGATAATATTTAAA
ATTAATTAATTAGTTAGTTAATTCCTTAAAATTTGTAATTAAAAAATTTATTTTTAACTA
TAGGGGTTTAGTCATTTCCACCAAGATGAACAGAACCGTTATCATCAGAAGAGATTACCT
CCACTATGTCAGAAAATACAACAGATATGAAAAGAGACACAGAAACATCCCCGTCCACAT
CTCCCCCTGTTTCTCCGTCAAGGAAGGTGATATCCTCGTTGCTGGTCAATGCAGGTAACT
AATCAATTATTTATATTCTAAATAATTAAAATAATTAAAAAATATATAATTCTAAAATTT
CTGTTTATTATAATAGACCCATCTCCAAAACCGTCAGATTCAACGCCCTCTAAGTTGTTC
CTAACGAAATTATTGGTTCTGTCAGAAAATAATTCCTCCTTTTCTGA