Identifiers and Description

Gene Model Identifier

TTHERM_01128560

Standard Name

RPS10 (Ribosomal Protein of the Small subunit 10)

Aliases

PreTt30035 | 247.m00031 | 3817.m00177

Description

RPS10 40S ribosomal protein S10 putative; Homolog of Yeast RPS10- Human RPS10; Plectin/S10 domain containing protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 11.8%

TetraMine Data

TTHERM_01128560

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_20787.1	2.0000012618802033e-84	plectin/S10 domain-containing protein (166 aa)
Oxytricha	Contig15938.0.g43	2.999534586690157e-23	Plectin/S10 domain
DictyBase	DDB_G0286117	2.0004286606204839e-16	rps10 on chromosome: 4 positio n 4072416 to 4073194
SGD	YMR230W	0.000000000000001999258566166494	RPS10B Protein component of th e small (40S) ribosomal subuni t; nearly identical to Rps10Ap and has similarity to rat rib osomal protein S10
WormBase	WBGene00004479	0.000000000010004361180063202	locus:rps-10 status:Confirme d UniProt:O01869 protein_i d:CCD67317.1

General Information

No Data fetched for General Information

Associated Literature

1. Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6

Sequences

>TTHERM_01128560(coding)
ATGGTTCACGTCTTAAAGGCCACTAAAATTAGAATTTACAAGCAATTATTGTAAGATGGT
GTCTTCGTCTTGAAGAAAGATTTCGAAGGTCACCACGAAGAAACTGGTGTCCCCAACTTA
CACTGCTACATCTTAGTTAGATCTTTGAAGGACAGAGGTTTCCTCGAAGAAATCTTCAAC
TGGGGTTTCACTTACTACTACCTTAACAAGGAAGGTTGTGAATACTTGAAGACTAAGTTG
GGTATTTCTGCTGATAATGTTATCCCCAAGACCTTCAAGGCCTCCAACGTCAACTTCATC
TCCAAGGAAGAAGACGAAGAAGAAAGACCCAGAAGACAATTCAACAAGGGTGGAAGAACT
GGTGAAAGAGATGGTAGAAACAAAAGAGGTGTTGGCCGTGGTACCAGAAGAGAAGGTGAA
GAAGCTGCCAAGGAAGAAGGTGCTGCTGAAACCGCTCAAGGTAATCAAGAAACTCCTGCT
CAAGAATGA

>TTHERM_01128560(protein)
MVHVLKATKIRIYKQLLQDGVFVLKKDFEGHHEETGVPNLHCYILVRSLKDRGFLEEIFN
WGFTYYYLNKEGCEYLKTKLGISADNVIPKTFKASNVNFISKEEDEEERPRRQFNKGGRT
GERDGRNKRGVGRGTRREGEEAAKEEGAAETAQGNQETPAQE

>TTHERM_01128560(gene)
ATGGTTCACGTCTTAAAGGCCACTAAAATTAGAATTTACAAGCAATTATTGTAAGATGGT
GTCTTCGTCTTGAAGAAAGATTTCGAAGGTCACCACGAAGAAACTGGTGTCCCCAACTTA
CACTGCTACATCTTAGTTAGATCTTTGAAGGACAGAGGTTTCCTCGAAGAAATCTTCAAC
TGGGGTTTCACTTACTACTACCTTAACAAGGAAGGTTGTGAATACTTGAAGACTAAGTTG
GGTATTTCTGCTGATAATGTTATCCCCAAGACCTTCAAGGCCTCCAACGTCAACTTCATC
TCCAAGGAAGAAGACGAAGAAGAAAGACCCAGAAGACAATTCAACAAGGGTGGAAGAACT
GGTGAAAGAGATGGTAGAAACAAAAGAGGTGTTGGCCGTGGTACCAGAAGAGAAGGTGAA
GAAGCTGCCAAGGAAGAAGGTGCTGCTGAAACCGCTCAAGGTAATCAAGAAACTCCTGCT
CAAGAATGA