Identifiers and Description

Gene Model Identifier

TTHERM_00636970

Standard Name

RPP0 (Ribosomal Protein P0 of the large subunit)

Aliases

PreTt19700 | 91.m00115 | RPL10-E.coli

Description

Homolog of yeast RPP0, human RPLP0, bacteria RPL10; Acidic ribosomal protein P0 of the large subunit

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• intracellular (IEA) | GO:0005622
• ribosome (IEA) | GO:0005840

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• ribosome biogenesis (IEA) | GO:0042254
• translational elongation (IEA) | GO:0006414

Domains

• ( PF00272 ) Cecropin family
• ( PF00466 ) ribosomal protein L10
• ( PF00428 ) 60s Acidic ribosomal protein

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 12%

TetraMine Data

TTHERM_00636970

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_03523.1	9.997093137033517e-262	60s Acidic ribosomal protein ( 324 aa)
Oxytricha	Contig18067.0.g83	3.0014802379878627e-60	Ribosomal protein L10
DictyBase	DDB_G0286501	8.000631584680795e-59	rplP0 on chromosome: 4 positio n 4590677 to 4591594
SGD	YLR340W	2.000555387360374e-52	RPP0 Conserved ribosomal prote in P0 of the ribosomal stalk, which is involved in interacti on between translational elong ation factors and the ribosome ; similar to rat P0, human P0, and E. coli L10e; phosphoryla ted on serine 302
WormBase	WBGene00004408	1.9990449803848145e-49	locus:rla-0 60S acidic ribos omal protein P0 status:Confi rmed UniProt:Q93572 protei n_id:CAB02098.1
Stentor Coeruleus	SteCoe_5574	5.380186160021138e-32

General Information

No Data fetched for General Information

Associated Literature

1. Ref:22052974: Klinge S, Voigts-Hoffmann F, Leibundgut M, Arpagaus S, Ban N (2011) Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6. Science (New York, N.Y.) 334(6058):941-8

Sequences

>TTHERM_00636970(coding)
ATGCCTCCTGCTAAAGTTGACAAGAAAGCTAAGAAGGACGCTTTCATCAGAAGATTCTAC
GAATTACTTTCCAAGTACGACTCCATCGCTCTCTGTACCTTGGAAAACGTTGGTTCTTTA
CAACTCCAATAAATCAGAAGATCTCTCGGTAGCAACAACATCATGGTTATCGGAAAGAAT
ACCGTCGTTAGAAAGGCTGTCTAACTTAAGTCTGCTGATTTACCCACTGACTCCAAGTAC
GACTGGTACAGACAATTCGGTGCTCCCAAGCCCTAACTTGCTTCCTTGATTCCTCACTTA
AAGAACAAGATTGCTTACGTTTTCCACAACGACCCCATCTTCGCCTTAAAGCCCAAGATT
GAATCCTTCGTTGTTCCCGCTCCTGCTAGAGTTGGTACTGTTGCCCAAAAGGACGTCATG
ATTCCTCCTGGCCCCACTGGTATGGATCCCTCATAAATTAACTTCTTCCACGCCTTGTCT
ATCTCCACCAAGATTCAAAAGGGTCAAATTGAAATTACCAAGGAAGTCTAGGTCTGTACT
AAGGGTAAGAAGATCGGTAACTCCGAAGTTTCTCTCTTGGAAAAGATGAACATCCAACCC
TTCTCTTATGGTATGAAGTGTTTCTCTGACTACGACAACGGTGAAATCTTAACTGAAGAA
GTCTTGTCTATCAGTCCCAGCGTTATTTTGGATGCTTTCGCCCAAAACACCTTAAGAATC
GCTGCCGTCTCCCTCGCCACCGGATACGTCACTGCTCCCTCCGTTCCTCACTTCATCCAA
AATGCTTTCAAGGATCTTGCTGCCATCGGTATGGAAACTGGTTACAAGTTCAAGGAAATT
GAAAATGCTGGTCAAGCTGTTGCTGTCTCTGCTCCCGCTGCTAAGACTGAAACCAAGGCT
GCCGCTAAGCCCGTCGTTGAAGAAAAGCCTGCTGAACCCGAAGAAGATTTGGACATGGGT
GATCTTTTCGGTTGA

>TTHERM_00636970(protein)
MPPAKVDKKAKKDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKN
TVVRKAVQLKSADLPTDSKYDWYRQFGAPKPQLASLIPHLKNKIAYVFHNDPIFALKPKI
ESFVVPAPARVGTVAQKDVMIPPGPTGMDPSQINFFHALSISTKIQKGQIEITKEVQVCT
KGKKIGNSEVSLLEKMNIQPFSYGMKCFSDYDNGEILTEEVLSISPSVILDAFAQNTLRI
AAVSLATGYVTAPSVPHFIQNAFKDLAAIGMETGYKFKEIENAGQAVAVSAPAAKTETKA
AAKPVVEEKPAEPEEDLDMGDLFG

>TTHERM_00636970(gene)
ATGCCTCCTGCTAAAGTTGACAAGAAAGCTAAGAAGGACGCTTTCATCAGAAGATTCTAC
GAATTACTTTCCAAGTACGACTCCATCGCTCTCTGTACCTTGGAAAACGTTGGTTCTTTA
CAACTCCAATAAATCAGAAGATCTCTCGGTAGCAACAACATCATGGTTATCGGAAAGAAT
GTAAGAATTTATTTTTTTTTGTACTTATATTTTTGTATCATAAATCATCATGTTCATCTT
CAACCCTTCAACCTTCAACACTTAATTAGCACAGGTTTAATCTAAAAATTCAAAATCTTC
AAAGATGCGGACTTTCAAATTAGAAATCATAATCAAATTTATCTACTTAATAACCAGCCA
ATCTACCTTAAACTCCAATCAATCAATCAACCTACCTACCTATTAATCTATTCAAAATCA
TTAATTGATTAATAAAATACACTCTCGACATGAAAGCTTCACATAATCTTTCTCGAGCTA
AAAAATTAGCATCAAACATAAATTTCTAGTTAATTTTAAAAAGCAATGCAACATCAAATA
GATATGCTGAGTGAAAAAGCAGAATAATCGCTCTTCTCCTTCAATATGGATTGCTTACTA
AGCAAAAAATATAGCTATTAAATAGTTTTGGTAAATAGCGAAGATTAAATTATTTGTTAT
TTTTCAGAGATATTATTAGTCAAAATTAAGAAAAATATCTTGTATTAGAAAGGAGGCTAA
AAATTAAAAACAAAAGAAAGAAAGCGTGAATTATGTTGAAAAAGGAAAGATTTTTAAGAT
CATAAGGATCTTCATAGTAAATATTTATCAAAGCATGTGGTGGAAGGAATGGTAGGTAAT
AAGTTTGAAGATACAAAGGTAGAAACTTCAAAAGCGGAGTATATTTGATTAATCAATCTA
TTTGAAAGTTTCATAACAATTAAAGGATAGATGAAGCGTTTTGTAAAAAATAAGAACATT
TTAAACTAAATTAGCAAGCAAGCAGCGCATAAACCAAATATTAGGTAGAAATAACCTATC
ATTGTTTGCTTGCAGCTTAATGCAAAAATGTCTGTTAGTCCTTCGAATTTAAATTTCATT
TTTCATAGTGAAAATTATACTAAATTAATTTGTCTGACCTCATATTAAAAAACTACTTTT
ATCACCACATACATACATATAAGTAGAAGAATAAATCTGTCAACAAAATAAATAGTAAAT
AACGAGATTTTATTCTTTTGGTGAAGCCATCCATAATAATAACAAATCATTAGCTAATTA
ACTTTCGAAGGTGTTAATTATATCAAAAAATAAATAAATAAAGATAGTATGAAACAAACA
AACAATAAATCAACCATTAATAATTAATTAGACTTAACTGTAATATCTATCTATCAATCC
AAATCCAAAAATTTCTAAATAATACTTTAGAACCATAGAATCAAATATAAATTTTTAGAA
AATGTGCTAATTTAAGCATAAAACGAAGTGGTAAACTTGGTGAAGAAAGAAGATGAGCAT
TTTAGAGTTTAATTTATGAACAAAATTTTAGCAAACTATTAAAACACTTAATATATTCTT
AACCATATTTTATTTTTTTGAAAAAAAAATATTTCTACCAGCAAACAAAAATTTTAAATA
TTTATTTTAACTCAATTTCTAAATTAATTAAATAGACCGTCGTTAGAAAGGCTGTCTAAC
TTAAGTCTGCTGATTTACCCACTGACTCCAAGTACGACTGGTACAGACAATTCGGTGCTC
CCAAGCCCTAACTTGCTTCCTTGATTCCTCACTTAAAGAACAAGATTGCTTACGTTTTCC
ACAACGACCCCATCTTCGCCTTAAAGCCCAAGATTGAATCCTTCGTTGTTCCCGCTCCTG
CTAGAGTTGGTACTGTTGCCCAAAAGGACGTCATGATTCCTCCTGGCCCCACTGGTATGG
ATCCCTCATAAATTAACTTCTTCCACGCCTTGTCTATCTCCACCAAGATTCAAAAGGGTC
AAATTGAAATTACCAAGGAAGTCTAGGTCTGTACTAAGGGTAAGAAGATCGGTAACTCCG
AAGTTTCTCTCTTGGAAAAGATGAACATCCAACCCTTCTCTTATGGTATGAAGTGTTTCT
CTGACTACGACAACGGTGAAATCTTAACTGAAGAAGTCTTGTCTATCAGTCCCAGCGTTA
TTTTGGATGCTTTCGCCCAAAACACCTTAAGAATCGCTGCCGTCTCCCTCGCCACCGGAT
ACGTCACTGCTCCCTCCGTTCCTCACTTCATCCAAAATGCTTTCAAGGATCTTGCTGCCA
TCGGTATGGAAACTGGTTACAAGTTCAAGGAAATTGAAAATGCTGGTCAAGCTGTTGCTG
TCTCTGCTCCCGCTGCTAAGACTGAAACCAAGGCTGCCGCTAAGCCCGTCGGTAAGAAAA
TTTTATTTATATTACATAAAAAATTGAAATTAATAAATATTTTTAATAAATTTTAGTTGA
AGAAAAGCCTGCTGAACCCGAAGAAGATTTGGACATGGGTGATCTTTTCGGTTGA