Identifiers and Description
Gene Model Identifier
TTHERM_00388440
Standard Name
RPN9 (26S proteasome regulatory subunit N9)
Aliases
PreTt24839 | 41.m00246
Description
RPN9 26S proteasome non-ATPase regulatory subunit
Genome Browser (Macronucleus)
Genome Browser (Micronucleus)
Gene Ontology Annotations
Cellular Component
Domains
Gene Expression Profile
Tetrahymena Functional Genomics Database:
Change in Gene Expression
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.4%
TetraMine Data
TTHERM_00388440
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description
Tetrahymena borealis EI9_04469.1 9.997093137033517e-262 PCI domain-containing protein
(379 aa)
DictyBase DDB_G0285105 1.0002758036576784e-62 psmD13 on chromosome: 4 positi
on 2852779 to 2854360
Oxytricha Contig746.1.g14 5.999013395827003e-54 PCI domain
SGD YDR427W 1.0003292389192957e-45 RPN9 Non-ATPase regulatory sub
unit of the 26S proteasome, ha
s similarity to putative prote
asomal subunits in other speci
es; null mutant is temperature
sensitive and exhibits cell c
ycle and proteasome assembly d
efects
WormBase WBGene00004465 3.000619078166531e-39 locus:rpn-9 status:Confirmed
UniProt:Q22253 protein_id
:CAA88971.1
Stentor Coeruleus SteCoe_8781 1.0530617357553812e-20
General Information
No Data fetched for General Information
Associated Literature
Ref:21637855 : Xiong J, Yuan D, Fillingham JS, Garg J, Lu X, Chang Y, Liu Y, Fu C, Pearlman RE, Miao W (2011) Gene network landscape of the ciliate Tetrahymena thermophila. PloS one 6(5):e20124
Sequences
>TTHERM_00388440(coding)ATG GAT TCA GAT CTT TTG TAA TAA TTA TAA GCT CAA TTC CCT CAA CAA TAA ACA ATT TTA GAA TAG CTA GCC TTG TTA TAT ACT TAA AAA TTG TGG CAT GAA ATT ACC TTA AAT TTG AAT ATT TTG TTG CAA GAT GAA AAT GTC CTT TAG GAG AGA AAA GCC TTA TTA AAA TTA TAT GAT GGC TTT GTC AAA AAA TTC ATT AAT AAG CTT GAT TAA CTT TTG TTA GCT AGA TTC TTG ACA TTC GTA GCT AAT GCA TTT GAC ACT AAT GAA GAG AAG TTT AAT TTC TTA GAA TAA GCT AGA TCT AAT TTC TCA GAA GAT AAT GCC AGA TAT ATA ATC TAA TTG CAA CAA ATT AGT TAC AGA TTA GAT GAT AAG CAC AGT GAA TAA AAT GAT ATT GAG TTG ACT GAA TTA AAA GAA AAA ATT GAA AAG CAA CAA GTA ATT GAA CCT CTT GCT TAT TCC TTC TTA TAT AGA GTT AGC TAC GAG TTC TAT TCC CAA AAG AAA AAT TAT GAA CTT TTA TAT TTA AAT GCT CTT TAA TTC CTT GCT TAC ACC CAA CCT TAA GAT ATT CCT ATT AGC TAT TAA CAA GAT ATC TCT CTT AAG ATG GCT ATA GCT ATT TTA GTC TCA CCT AAG ATC TAC AAT TTC AGT GAA CTT CTT CAA CAA AGT GTT GTT AAA TCT CTT CAA AAC ACT ACT TAC TCA TGG TTG TAC ACT TTG ATT GAA ACT TTT AAT AGT GGA AAC GTG GAT AAG TAT TAC TAA GAT CTT AAA TCT TTT GAT GCA TAA ATT AAA TAA AAT GCC TTA TTA GTT AGC AAT CAA AAA TTA TTA GAA GAA AAA ATT AGA ATT ATG GCC TTC CTT GAT TTG GTA TTT AAT TTA CCT AAA AAT GAT AGA ACC ATA TCC TTC TAG AAA GTA GCT GAA AGA ACT AAA TAA CCA GTC AAC GAA ATC GAA TAT TTG CTT ATG AGA AGT ATG GCT TTA GGA TTA GTT AAA GGA TCT ATA AAT TAG GTT TAA GGC AAC GTA ACA ATA AGT TGG ATG ATT CCT AGA ATC TTA GAT AAC TCA AGA ATA TAA ATT ATG AAA AAT AAA TTC GAT GAA TGG ACT AAT AGT CTT AGA AAT TTA ATT TAA TTA GTA GAA TAA GAA CCA GTA CCT CTT TAT TGA >TTHERM_00388440(protein)M D S D L L Q Q L Q A Q F P Q Q Q T I L E Q L A L L Y T Q K L W H E I T L N L N I L L Q D E N V L Q E R K A L L K L Y D G F V K K F I N K L D Q L L L A R F L T F V A N A F D T N E E K F N F L E Q A R S N F S E D N A R Y I I Q L Q Q I S Y R L D D K H S E Q N D I E L T E L K E K I E K Q Q V I E P L A Y S F L Y R V S Y E F Y S Q K K N Y E L L Y L N A L Q F L A Y T Q P Q D I P I S Y Q Q D I S L K M A I A I L V S P K I Y N F S E L L Q Q S V V K S L Q N T T Y S W L Y T L I E T F N S G N V D K Y Y Q D L K S F D A Q I K Q N A L L V S N Q K L L E E K I R I M A F L D L V F N L P K N D R T I S F Q K V A E R T K Q P V N E I E Y L L M R S M A L G L V K G S I N Q V Q G N V T I S W M I P R I L D N S R I Q I M K N K F D E W T N S L R N L I Q L V E Q E P V P L Y >TTHERM_00388440(gene)ATG GAT TCA GAT CTT TTG TAA TAA TTA TAA GCT CAA TTC CCT CAA CAA TAA ACA ATT TTA GAA TAG CTA GCC TTG TTA TAT ACT TAA AAG TAC ATA TTT ATT TTA TTA AGT CAC TAT TAG ATT ACT TAG TAA ATA ATA AAG TGA TAA ATG ATT TCT ATT CCA ATC TCA AAG AAA TCA TCA ACA TAA TAT TTC GAA TAT TAG TTA TTA TTG CAC AGT ATT TGT ATA TTA AGC ATT TTA TAA TAT TTA ATT ATA GAT TGT GGC ATG AAA TTA CCT TAA ATT TGA ATA TTT TGT TGC AAG ATG AAA ATG TCC TTT AGG AGA GAA AAG CCT TAT TAA AAT TAT ATG ATG GCT TTG TCA AAA AAT TCA TTA ATA AGC TTG ATT AAC TTT TGT TAG CTA GAT TCT TGA CAT TCG TAG CTA ATG CAT TTG ACA GTA AAA TAT ATT ACT TTA AAT AAA ATA TTC AAT GAA AAT TAT AAT TAT TTA CTA TCT TTT TAA AAA TAA AGC TAA TGA AGA GAA GTT TAA TTT CTT AGA ATA AGC TAG ATC TAA TTT CTC AGA AGA TAA TGC CAG ATA TAT AAT CTA ATT GCA ACA AGT AAT ACA TTA ACA CAT ACT TAG CTA TAA TAA TTC ACT ATC AGC ATT TAA TGT AAC TTA TAA ATA TTT TCT ATA AAA AAT AGA TTA GTT ACA GAT TAG ATG ATA AGC ACA GTG AAT AAA ATG ATA TTG AGT TGA CTG AAT TAA AAG AAA AAA TTG AAA AGC AAC AAG TAA TTG AAC CTC TTG CTT ATT CCT TCT TAT ATA GAG TTA GCT ACG AGT TCT ATT CCC AAA AGA AAA ATT ATG AAC TTT TAT ATT TAA ATG CTC TTT AAT TCC TTG CTT ACA CCC AAC CTT AAG TAA AAT ATA TTG TTT CAA AAT ATT CTA TGG TTA ATC TTT ATT TAA TAA AAG GAT ATT CCT ATT AGC TAT TAA CAA GAT ATC TCT CTT AAG ATG GCT ATA GCT ATT TTA GTC TCA CCT AAG ATC TAC AAT TTC AGT GAA CTT GTA ATA AAT TAA TAA AAT TTT AAG CAA AAA CAG CTA GTT AAA AAG TTA ATT TAA ATA TTT TAT ATA GCT TCA ACA AAG TGT TGT TAA ATC TCT TCA AAA CAC TAC TTA CTC ATG GTT GTA CAC TTT GAT TGA AAC TTT TAA TAG TGG AAA CGT GGA TAA GTA TTA CTA AGA TCT TAA ATC TTT TGA TGC ATA AAT TAA ATA AAA TGT AAT TAA TTA ATT ATT TAT TGT AAA TTC TTT TTT GAT AAA CAT GTA TCA AAT AAC TGT TAA ATA AAT AGG CCT TAT TAG TTA GCA ATC AAA AAT TAT TAG AAG AAA AAA TTA GAA TTA TGG CCT TCC TTG ATT TGG TAT TTA ATT TAC CTA AAA ATG ATA GAA CCA TAT CCT TCT AGA AAG TAG CTG AAA GAA CTA AAT AAC CAG TCA ACG AAA TCG AAT ATT TGC TTA TGA GAA GTA TGG CTT TAG GAT TAG TTA AAG GAT CTA TAA ATT AGG TAA ATT TAA ATA AAT TTT TAA AGC AAA CTC ATT CAT TAT TTC TTT ATT TAT TAT TAA TTT GTT AAC AGG TTT AAG GCA ACG TAA CAA TAA GTT GGA TGA TTC CTA GAA TCT TAG ATA ACT CAA GAA TAT AAA TTA TGA AAA ATA AAT TCG ATG AAT GGA CTA ATA GTC TTA GAA ATT TAA TTT AAT TAG TAG AAT AAG AAC CAG TAC CTC TTT ATT GA