Identifiers and Description
Gene Model Identifier
TTHERM_00446090
Standard Name
RPN3 (26S proteasome regulatory subunit N3)
Aliases
PreTt03878 | 51.m00244 | 3704.m00099
Description
RPN3 26S proteasome non-ATPase regulatory subunit 3 putative; PCI domain containing protein
Genome Browser (Macronucleus)
Genome Browser (Micronucleus)
Gene Ontology Annotations
Cellular Component Molecular Function Biological Process
Domains
Gene Expression Profile
Tetrahymena Functional Genomics Database:
Change in Gene Expression
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.2%
TetraMine Data
TTHERM_00446090
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description
Tetrahymena borealis EI9_10841.1 9.997093137033517e-262 PCI domain-containing protein
(484 aa)
Oxytricha Contig16126.0.g91 2.0005752503420762e-105 PCI domain
DictyBase DDB_G0288621 3.9981372112117256e-92 psmD3 on chromosome: 5 positio
n 1750413 to 1752480
WormBase WBGene00004460 6.000161128365848e-68 locus:rpn-3 26S proteasome n
on-ATPase regulatory subunit 3
status:Confirmed UniProt:
Q04908 protein_id:CCD66158.1
SGD YER021W 2.000597631390999e-64 RPN3 Essential, non-ATPase reg
ulatory subunit of the 26S pro
teasome lid, similar to the p5
8 subunit of the human 26S pro
teasome; temperature-sensitive
alleles cause metaphase arres
t, suggesting a role for the p
roteasome in cell cycle contro
l
Stentor Coeruleus SteCoe_22558 2.6786369618080778e-33
General Information
No Data fetched for General Information
Associated Literature
Ref:21637855 : Xiong J, Yuan D, Fillingham JS, Garg J, Lu X, Chang Y, Liu Y, Fu C, Pearlman RE, Miao W (2011) Gene network landscape of the ciliate Tetrahymena thermophila. PloS one 6(5):e20124
Sequences
>TTHERM_00446090(coding)ATG TCA TAA GCT AAA GAC GAT AAA AAT AAC AAA GAT AAT TAA GCC AAA AAG GTT GAA AAG AAG GAA GAA GTT GTT AAG AAA CCT GTT ACC CTT TTA GAA GAA CTC AGA AAC TAG GTT TTA ACA ATT GAA AAA GCT ATA ACT TAA AGC GAT TTA AAG ACT GTT TAG AAG ACA TGC AAA GGT ATG AGA CGC TTC AAA AAA TAT TTA AAA TCT CAC CAC TTT GCT AAA ATT TGG GCT GCT ATC TTC CCA AAT GAA ACT GAA TAT AAC TTT GAA AGC TTT GAA GAT TTC GAT AAA ACA TTT GAA GAG AAT TTC GAT ATT TCC AAG AAA AAA GTT TAA AAA ATT TCA AAG GCT CCT GAA TTT GAT TTC TTT TTC AAA ATT CTC CTT TTA TGC TAC TTC CTT CAA ATA AAT AAA GTT GAT CAA GCT TAT GAT TTA GCT GGA AAG CTG TTT AAC AGA GTT TCT GAA GTT AAT AAA AAG CAT TTT GAA TAG CTG AGT GCC TTT GTT TAT TTC TAT TAT GCA CGT ACT CGT GAA ATT AAA AAC CAA ATT ATT GAA ATT AGG GAA GAA CTA TTC GAG GCT TAT AGA TTA GCA TGT ATC AAG CAT AAT GAT TTA GCT TAA GCT ACT TTA ATT AAT GCT ATT TTG AGA AAC TAT TTG CAC TAC AAT CAC TAT GAA GCT GCT TAA CAT TTT GTT TCT AAA ATT ACT TTC CCT GAA AAT GTA TCA AAC AAC GAA CTA ATT CGT TTC CTT TAC TAC ACT GGT AGA ATA AAA GCT GTT CAA GTA GAA TAC TCT GAA GCT TTC AAT TAC CTT AAT TAA GCT CTC AAA AAG TCT CCT GAT AAC TCT GCT TTA GGA TTC CGT ATT GAA GCA TAA AAA CTT GCT ATT ATA GTA GAA TTT TTA ATG GGT AAT ATT CCT AGT AGA GAT ATT TTT ACA AAG TAA GAG TTC TGG AAA CCT CTT TAT CCT TAC TAT AAG TTA GTT TAA AGT GTA TTG AGA GGT AAT TTG CTT GAC TTT AAC AAA GTT GTT GCT TAA TAT GCA AAC TTG TTC ATA AAA GAT AAA AAT TTT TCT TTA ATT CAA AGG TTA TAG CAA ACA GTT ATT AAA ACT GGA TTA AGA AAA ATC AAT TTA TCC TAT AGC AGA ATT TCA TTT ACT GAT ATT GCA TAA AAA TTA GAC TTG AAA AAA AAT AGT GAT GTT GAA TTC ATC GTA GCA AAA GCC ATT AGA GAT GGT ATC CTT AAT GCA AAG ATT GAC CAT GAA AAT TAG TAT ATA GTT ATT AAG CAA GAA AAC GAT ATC TAT AGT ACT AAT TAA CCT TAA GAT GCT TTC GCT AAG AGA ATT TCA TAT TGT CTT AAC CTC CAC AAC TCT GCT ACT AAA GCT CTT TAG TAT CCT GAT ACA AAC TAC CAA TAT TAG AAT AAA AGC GAT GAT GAA AAT GAT GAT GAT GAG GAT ATT GAT ATT TAT AAA ATT ATG GAA GAA GAC AGT TGA >TTHERM_00446090(protein)M S Q A K D D K N N K D N Q A K K V E K K E E V V K K P V T L L E E L R N Q V L T I E K A I T Q S D L K T V Q K T C K G M R R F K K Y L K S H H F A K I W A A I F P N E T E Y N F E S F E D F D K T F E E N F D I S K K K V Q K I S K A P E F D F F F K I L L L C Y F L Q I N K V D Q A Y D L A G K L F N R V S E V N K K H F E Q L S A F V Y F Y Y A R T R E I K N Q I I E I R E E L F E A Y R L A C I K H N D L A Q A T L I N A I L R N Y L H Y N H Y E A A Q H F V S K I T F P E N V S N N E L I R F L Y Y T G R I K A V Q V E Y S E A F N Y L N Q A L K K S P D N S A L G F R I E A Q K L A I I V E F L M G N I P S R D I F T K Q E F W K P L Y P Y Y K L V Q S V L R G N L L D F N K V V A Q Y A N L F I K D K N F S L I Q R L Q Q T V I K T G L R K I N L S Y S R I S F T D I A Q K L D L K K N S D V E F I V A K A I R D G I L N A K I D H E N Q Y I V I K Q E N D I Y S T N Q P Q D A F A K R I S Y C L N L H N S A T K A L Q Y P D T N Y Q Y Q N K S D D E N D D D E D I D I Y K I M E E D S >TTHERM_00446090(gene)ATG TCA TAA GCT AAA GAC GAT AAA AAT AAC AAA GAT AAT TAA GCC AAA AAG GTT GAA AAG AAG GAA GAA GTT GTT AAG AAA CCT GTT ACC CTT TTA GAA GGT AAT TTC AAA GAA GAA ATG AAA ATG TTT TAT ATT GAT TTA AAT AAA TTC TTA CAA ATT TTG ATG ATT TTA ATC ATG CAA TTT TTG ATG TAA AAA CGA CAT TAA TCA TTT ATT TAA ATC AAT AAA ATG CAT AAA AAT TAA TTT TTT TAT TTT ATT TAA TGA CTT ATC TTA AAA TCA CAT AGA ACT CAG AAA CTA GGT TTT AAC AAT TGA AAA AGC TAT AAC TTA AAG CGA TTT AAA GAC TGT TTA GAA GAC ATG CAA AGG TAT GAG ACG CTT CAA AAA ATA TTT AAA ATC TCA CCA CTT TGC TAA AAT TTG GGC TGC TAT CTT CCC AAA TGA AAC TGA ATA TAA CTT TGA AAG CTT TGA AGA TTT CGA TAA AAC ATT TGA AGA GAA TTT CGA TAT TTC CAA GAA AAA AGT TTA AAA AAT TTC AAA GGC TCC TGA ATT TGA TTT CTT TTT CAA AAT TCT CCT TTT ATG CTA CTT CCT TCA AAT AAA TAA AGT TGA TCA AGT ATG GTT TTT TTC TTC AAA AAT TAT GAC GAA TAC AAT TTA TAT ACA TTC AAT AAA TAC ATG AGT ATT CAA GTG ACA AAT ACT ATA AGC TTT TAA CAT ATA TTT ATT ATA TAA TAT GTT TAA TTA TTA TTA TGT TTT GGG ATG ATT TTT CAA TCT AAA TTA TAA ATA AAT TAT TTA ATA GGC TTA TGA TTT AGC TGG AAA GCT GTT TAA CAG AGT TTC TGA AGT TAA TAA AAA GCA TTT TGA ATA GCT GAG TGC CTT TGT TTA TTT CTA TTA TGC ACG TAC TCG TGA AAT TAA AAA CCA AAT TAT TGA AAT TAG GGA GTA ATA ATT AAT ATG TTA TGA TAG CAT TTT AGA ATT TTA AAA TGC TTC TAG ATT TTA TTT GTA ATT AAA CAT GTT TTT AAT TAA AAA AGA GAA CTA TTC GAG GCT TAT AGA TTA GCA TGT ATC AAG CAT AAT GAT TTA GCT TAA GTA AAT TCG ATT TGA ATA ATG TTT GAT TCT TTA ATA AGT TAT CTA ATT ATA TTA TAA AAG GCT ACT TTA ATT AAT GCT ATT TTG AGA AAC TAT TTG CAC TAC AAT CAC TAT GAA GCT GCT TAA CAT TTT GTT TCT AAA ATT ACT TTC CCT GAA AAT GTA TCA AAC AAC GAA CTA ATT CGT TTC CTT TAC TAC ACT GGT AGA ATA AAA GCT GTT CAA GTA GAA TAC TCT GAA GCT TTC AAT TAC CTT AAT TAA GCT CTC AAA AAG TCT CCT GAT AAC TCT GCT TTA GGA TTC CGT ATT GAA GCA TAA AAA CTT GCT ATT ATA GTA GAA TTT TTA ATG GTA ATT TAG TTC TTA AAA ATA ACA AAA TTT TAC CTG AAA TAT TTT TAA ATA AAA GGG TAA TAT TCC TAG TAG AGA TAT TTT TAC AAA GTA AGA GTT CTG GAA ACC TCT TTA TCC TTA CTA TAA GTT AGT TTA AAG TGT ATT GAG AGG TAA TTT GCT TGA CTT TAA CAA AGT TGT TGC TTA ATA TGC AAA CTT GTT CAT AAA AGA TAA AAA TTT TTC TTT AAT TCA AAG GTA AAA AAT CAA TAA AAT GAA ATG CAA AAA TAA AAT TTT TTT AAT TAT TTT AAA TAT AGG TTA TAG CAA ACA GTT ATT AAA ACT GGA TTA AGA AAA ATC AAT TTA TCC TAT AGC AGA ATT TCA TTT ACT GAT ATT GCA TAA AAA TTA GAC TTG AAA AAA AAT AGT GAT GTT GAA TTC ATC GTA GCA AAA GCC ATT AGA GAT GGT ATC CTT AAT GCA AAG ATT GAC CAT GAA AAT TAG TAT ATA GTT ATT AAG GTA ATT TCT TAA ATA ATC TTT TAA AAA AAG CAT AAA ATT TTT AAT TTA AAA TTA TAA ACT AAT AGC AAG AAA ACG ATA TCT ATA GTA CTA ATT AAC CTT AAG ATG CTT TCG CTA AGA GAA TTT CAT ATT GTC TTA ACC TCC ACA ACT CTG CTA CTA AAG TAA TTT AAA CAA ATT CTA TAA ATA AAA TTA AAA ATT ATA AAT GTT TTT TAA TAC TTA ATA GGC TCT TTA GTA TCC TGA TAC AAA CTA CCA ATA TTA GAA TAA AAG CGA TGA TGA AAA TGA TGA TGA TGA GGA TAT TGA TAT TTA TAA AAT TAT GGA AGA AGA CAG TTG A