Identifiers and Description

Gene Model Identifier

TTHERM_01005130

Standard Name

RPN13 (26S proteasome regulatory subunit)

Aliases

PreTt27630 | 192.m00068 | 3757.m00316

Description

RPN13 ubiquitin carboxy-terminal hydrolase 37 receptor-binding site protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• nucleus (IEA) | GO:0005634
• cytoplasm (IEA) | GO:0005737

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.4%

TetraMine Data

TTHERM_01005130

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_19886.1	4.001580524003507e-155	hypothetical protein (334 aa)
Oxytricha	Contig1035.0.1.g71	1.0004783691736523e-35	Proteasome complex subunit Rpn 13 ubiquitin receptor
DictyBase	DDB_G0272624	2.000769134519826e-18	adrm1-1 on chromosome: 2 posit ion 2270218 to 2271796
WormBase	WBGene00016981	0.00000000002000577768187062	Proteasomal ubiquitin receptor ADRM1 homolog status:Confir med UniProt:Q09289 protein _id:CCD66338.1

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_01005130(coding)
ATGAGTTTAGATTTTGTCAAGGAATATTCTTTTAAGGCAGGAATTATGAATTTAGATCCC
ACAACCAAAAAGGTTACTGCTGATAAAAGAAAAGGAACTGTAAAAATTGGATGCACTTTA
GAAGGCGAGAAACCTTTTACCTGGACACCTGAAGGAGCTACTGAACCCGAATTTGAATAT
GCAGTAATGTAAAGTGATGCTTCTCTAGAATTGTCTAAGTAAATGAAAAGAGTTGTAGTT
TTGAGATTTTAATGTGATGAATCAAGATACTTCTTTTGGCTTTAAGAAAAAGATGCTTCC
AAAGATGCTGAAATTGTTAGTAGAGTATAAGACATTATTGATTTTGATATTGAATAATTA
ATGATAGATGAATCATCTTCTGTTTCAGAACCTTAATAATCACTTTCTCAGTAATCTTCA
TCTTAATCCTAACCTTAACCTGCCCAATAAGGTTAACCAAATTTAATGAATGCTAATCTT
TTTGGTGCTCAATTTTAAGATATGTTTTAAAACATGTTAAATCAAAGAGGAGGAAATAAT
AATCCAATGATGTAATAACTTTTGTAATAATACTAGCAAAGATAAAGAGATACTCCCAAT
TTCTTTGAAGTATTAACTAAAGAAAGTTTAATGGAATTAGCAAACGACGAAGAAGTCTAA
AAAGAGCTTATTTAGCATTTACCTGAAGGATAATAGGATGTTTAAAATTTAAAAGAAAAT
TTGATTAGTCCACAATTCTAATAAGCACTAGAATCATTAGAAAAAGCTCTTAATTCCAAT
GAGGGAGGAGCTGTATTAGCTTCATTAGGATTAGACTAATCTAATTTTATGGAAACTCTT
GATGGATCTGACTCATTCTATAAAGCAATAATCAAATGGGCTGAATCATAGAAGAAATAA
TGA

>TTHERM_01005130(protein)
MSLDFVKEYSFKAGIMNLDPTTKKVTADKRKGTVKIGCTLEGEKPFTWTPEGATEPEFEY
AVMQSDASLELSKQMKRVVVLRFQCDESRYFFWLQEKDASKDAEIVSRVQDIIDFDIEQL
MIDESSSVSEPQQSLSQQSSSQSQPQPAQQGQPNLMNANLFGAQFQDMFQNMLNQRGGNN
NPMMQQLLQQYQQRQRDTPNFFEVLTKESLMELANDEEVQKELIQHLPEGQQDVQNLKEN
LISPQFQQALESLEKALNSNEGGAVLASLGLDQSNFMETLDGSDSFYKAIIKWAESQKKQ

>TTHERM_01005130(gene)
ATGAGTTTAGATTTTGTAAAAAAAATATAACTTTTTGTAATAAGCAATGAAAATTTATAA
AATTTATTGTATACTTATAGGTCAAGGAATATTCTTTTAAGGCAGGAATTATGAATTTAG
ATCCCACAACCAAAAAGGTTACTGCTGATAAAAGAAAAGGAACTGTAAAAATTGGATGCG
TATGTTTATTTTAAACTTTGAAAAATTGATAAGTTTACATAGAGGTTTTTTATATTAATA
AAAGACTTTAGAAGGCGAGAAACCTTTTACCTGGACACCTGAAGGAGCTACTGAACCCGA
ATTTGTAAAATAATAGATTTGTTATTTATTTAGATCCTATGAGAATAATAAATATACATC
CAAACTAATTTACATTCAATTTTAAAAACATTTAGGAATATGCAGTAATGTAAAGTGATG
CTTCTCTAGAATTGTCTAAGTAAATGAAAAGAGTTGTAGTTTTGAGATTTTAATGTGATG
AATCAAGATACTTCTTTTGGCTTTAAGTAAAAATTTGAATATCGAAGCATATAAATAGAA
TTCTGATAATATTTATTAGAAGAAGATCAGATTTCTATATTAACAAACCTTACTCTCGAT
TATGTTTTAATTAAATTCTTATATTTTTATAAAGGAAAAAGATGCTTCCAAAGATGCTGA
AATTGTTAGTAGAGTATAAGACATTATTGATTTTGATATTGAATAATTAATGATAGATGA
ATCATCTTCTGTTTCAGAACCTTAATAATCACTTTCTCAGTAATCTTCATCTTAATCCTA
ACCTTAACCTGCCCAATAAGGTTAACCAAATTTAATGAATGCTAATCTTTTTGGTGCTCA
ATTTTAAGATATGTTTTAAAACATGTTAAATCAAAGAGGAGGAAATAATAATCCAATGAT
GTAATAACTTTTGTAATAATACTAGCAAAGATAAAGAGATAGTAAAATTGTTTAAACTTT
AATAAGTTATTTATTGTAAAGAAAAATAAATAATTAATTTAGCTCCCAATTTCTTTGAAG
TATTAACTAAAGAAAGTTTAATGGAATTAGCAAACGACGAAGAAGTCTAAAAAGAGCTTA
TTTAGTAAATTAAAAACTTAAAATGAAATCTAATAAAATATGCTTTAAAAATTTCTAGGC
ATTTACCTGAAGGATAATAGGATGTTTAAAATTTAAAAGAAAATTTGATTAGTCCACAAT
TCTAATAAGCACTAGAATCATTAGAAAAAGCTCTTAATTCCAATGAGGGAGGAGCTGTAT
TAGCTTCATTAGGATTAGACTAATCTAATTTTATGGAAACTCTTGATGGTAATTAAATCA
CTAAAAAATTAAATATAATCATATTTAAATTATTTTTATCATCTTATTAATTAGGATCTG
ACTCATTCTATAAAGCAATAATCAAATGGGCTGAATCATAGAAGAAATAATGA