Identifiers and Description
Gene Model Identifier
TTHERM_01142730Standard Name
RPL9 (Ribosomal protein of the large subunit)Aliases
PreTt04328 | 252.m00039 | 3824.m03216 | RPL6-E.coliDescription
RPL9 60S ribosomal protein L9; Ribosomal protein L6 containing protein; Homolog of yeast RPL9(/RPL6) and E.coli RPL6Genome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- ribosome (IEA) | GO:0005840
Molecular Function
- rRNA binding (IEA) | GO:0019843
- structural constituent of ribosome (IEA) | GO:0003735
Biological Process
- translation (IEA) | GO:0006412
Domains
No Data fetched for Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10%
TetraMine Data
TTHERM_01142730
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_01482.1 3.001062636953563e-123 ribosomal protein L6 containin
g protein (189 aa)
DictyBase DDB_G0278959 1.0002546821282671e-50 rpl9 on chromosome: 3 position
1387306 to 1388202
Oxytricha Contig14534.0.g66 5.00115835552873e-49 Ribosomal protein L6
WormBase WBGene00004420 1.000499495426459e-47 locus:rpl-9 60S ribosomal pr
otein L9 status:Confirmed
UniProt:Q95Y90 protein_id:CC
D63603.1
SGD YNL067W 1.0003292389192957e-45 RPL9B Protein component of the
large (60S) ribosomal subunit
, nearly identical to Rpl9Ap a
nd has similarity to E. coli L
6 and rat L9 ribosomal protein
s
Stentor Coeruleus SteCoe_7487 9.602680054508676e-24
General Information
No Data fetched for General Information
Associated Literature
- Ref:22052974: Klinge S, Voigts-Hoffmann F, Leibundgut M, Arpagaus S, Ban N (2011) Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6. Science (New York, N.Y.) 334(6058):941-8
Sequences
>TTHERM_01142730(protein)
MRHLLTEVNVPIPDKVTITAKQRVVEVKGPLGTIKRAFRYASVDIQKPTADNVKLQIWQA
SRKERAVLQSIASQIKNMIRGVTEGYKFKMKLAFAHFPIQEAVAKDGSSIEIKHFLGEKR
IRRIQALPGVKISRKDEEKNTLTLQGIDLNNVSQTCALIHQSCLVKEKDIRQFLDGIYVS
DKRLAMNE>TTHERM_01142730(coding)
ATGAGACACTTACTTACCGAAGTCAACGTACCCATCCCTGATAAGGTCACCATCACTGCT
AAATAAAGAGTAGTTGAAGTCAAGGGACCCTTAGGTACCATCAAGAGAGCTTTCAGATAC
GCCTCTGTTGATATTCAAAAGCCTACCGCCGACAACGTTAAGTTATAAATCTGGTAAGCT
TCCAGAAAGGAAAGAGCCGTCCTCCAATCTATTGCTTCTCAAATCAAGAATATGATTAGA
GGTGTTACTGAAGGTTACAAATTCAAGATGAAGCTTGCCTTCGCTCACTTCCCCATTTAA
GAAGCTGTTGCTAAGGATGGTTCCTCCATTGAAATTAAGCATTTCTTGGGTGAAAAGAGA
ATTAGAAGAATCCAAGCTCTTCCTGGTGTCAAGATCTCCAGAAAGGACGAAGAAAAGAAT
ACCCTCACCCTCTAAGGTATTGACTTGAACAACGTCTCCCAAACTTGCGCTCTCATCCAC
CAATCTTGTTTGGTCAAAGAAAAGGATATCAGACAATTCTTGGACGGTATTTACGTTTCT
GATAAGAGACTCGCCATGAACGAGTGA>TTHERM_01142730(gene)
ATGAGACACTTACTTACCGAAGTCAACGTACCCATCCCTGATAAGGTCACCATCACTGCT
AAATAAAGAGTAGTTGAAGTCAAGGGACCCTTAGGTACCATCAAGAGAGCTTTCAGATAC
GCCTCTGTTGATATTCAAAAGCCTACCGCCGACAACGTTAAGTTATAAATCTGGTAAGCT
TCCAGAAAGGAAAGAGCCGTCCTCCAATCTATTGCTTCTCAAATCAAGAATATGATTAGA
GGTGTTACTGAAGGTTACAAATTCAAGATGAAGCTTGCCTTCGCTCACTTCCCCATTTAA
GAAGCTGTTGCTAAGGATGGTTCCTCCATTGAAATTAAGCATTTCTTGGGTGAAAAGAGA
ATTAGAAGAATCCAAGCTCTTCCTGGTGTCAAGATCTCCAGAAAGGACGAAGAAAAGAGT
AATTCATTTTTTTTTTTTTAATATTTTTTAATATAAATGTGCATGTATTCGATTAAAATA
CTAAGAGCTATTTCGCTGATAGCTTGCATTTTAAGATTAATTTGATTAGTCTATTTTACA
GTAATTAAATTTGCTTTTCTCCTTGGTTATGCAGATATTTGGAGTAATTAATAGTCGGTC
ATCAATCAATTAATCAATGTGTATAAATCAACATTAAATAAGAATTTAGAAATCAAAATC
AATTTAAGCACATTCTCCAGAAAAAAAGTTCCTTAATATGCTAATAATAGTATCCAAATT
ATAGTTTAAAACTCATACAACAGTTTAAAATAAGTGAAATTAACAAACCAAACAACTAAG
CTACCCTTTAATGAATATTAAGTGCTAATACCTATCAATCAATCAGGTGCTTGTCCTTGT
TCTATATTTAATGAACAAGTTAGTTCACGAAGTCATAATAGGTTGATAAAAAGAGAATGA
GTTAAAATGAAGAGTAGCGAAATATTTACTGAATAGCAATAATTAGCTTAATTTAATTAA
ATTAGTTAATATAGGCGGCAGCAACAGCATTATCATCATTTTTAATTATATTTTTCAGGG
AAATAAGCAATGAAAAGATTATATTTATATAAGCTGGCTGCAGCAAAAAACTCTTTCATT
TAAGGTGTGAGTAATAAATAAATCATCCTATAAAGTAGCTCAAAGTATAATAAAGGACTG
ATTCGTATGAGTTTAAATTAAATGGAATTATATTGTTGGATAGAAAATTAATTTTGAATA
ATAACCAGATATTTTGTGAATGAACAGCAAAAAACAAAAAGACAATCAAATTAATATTAA
AATAAATGAATTAATAAATAAATAAATATATTTTATTTGGTTTACTGCACAAATATTTAC
AATAAATAAATAAAATAATAATTCTTACAATCATTTCTAACAACATATCTTTATCAATTA
TTATAGATACCCTCACCCTCTAAGGTATTGACTTGAACAACGTCTCCCAAACTTGCGCTC
TCATCCACCAATCTTGTTTGGTCAAAGAAAAGGATATCAGACAATTCTTGGACGGTATTT
ACGTTTCTGATAAGAGACTCGCCATGAACGAGTGA