Identifiers and Description
Gene Model Identifier
TTHERM_00736480Standard Name
RPL5 (Ribosomal protein of the large subunit)Aliases
PreTt25473 | 120.m00131Description
RPL5 60S ribosomal protein L5; Ribosomal L18p/L5e family proteinGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- ribosome (IEA) | GO:0005840
- intracellular (IEA) | GO:0005622
Molecular Function
- structural constituent of ribosome (IEA) | GO:0003735
Biological Process
- translation (IEA) | GO:0006412
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10%
TetraMine Data
TTHERM_00736480
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_10631.1 9.997093137033517e-262 hypothetical protein (302 aa)
Oxytricha Contig22366.0.g46 1.0001900614163146e-108 Ribosomal L18p/L5e family
WormBase WBGene00004416 6.001435805040647e-94 locus:rpl-5 60S ribosomal pr
otein L5 status:Confirmed
UniProt:P49405 protein_id:CA
A90251.1
DictyBase DDB_G0278539 2.0008312485874125e-83 rpl5 on chromosome: 3 position
1039561 to 1040650
SGD YPL131W 2.0001503375893664e-79 RPL5 Protein component of the
large (60S) ribosomal subunit
with similarity to E. coli L18
and rat L5 ribosomal proteins
; binds 5S rRNA and is require
d for 60S subunit assembly
Stentor Coeruleus SteCoe_20741 1.2160992992528256e-37
General Information
No Data fetched for General Information
Associated Literature
- Ref:22052974: Klinge S, Voigts-Hoffmann F, Leibundgut M, Arpagaus S, Ban N (2011) Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6. Science (New York, N.Y.) 334(6058):941-8
Sequences
>TTHERM_00736480(coding)
ATGGGTTTCGTTAAAGTTCTCAAGACTAAGGCTTACTTCAAGAGATTCTAAACCAAGTAC
AGAAGAAGAAGAGAGGGTCTCACTGATTACTACGCCAGAAAGAGATTGATCATCCAAGAT
AAGGATAAATACAACACCCCCAAGTACAGATTAGTTGCTAGAGCCACCAACACCAGAATC
ATCGCCTAGATCGTCTACGCTACCCTCAAGTGCGACAGAGTCCTCTGTGCTGCTGACTCC
TACGAACTCAAGAGATTCGGAGTCTCCACTGGTTTGGCTTCCTACGCTGCTGCCTACGCC
ACTGGTCTCTTATTAGCCAGAAGATTGCTCAAGCAAATCGGTTTAGACACCGTTTATGCT
GGTCAAACTAAGGTTGATGGTGCCTACTTCAATGTCGATGAAGACCAAAAGGAAAAGAAG
CCCTTCAAGGCTATTTTGGATGCTGGTTTGGTCAGAACCACCACCGGTAACAGAGTCTTC
GGTGTCTTAAAGGGTGCTTGCGATGGTGGTATTAACATCCCCCACTCTGAAAGCAGATTC
CCCGGTTACGTCAGAGCTTCTGATGAAGGTGAATCCTCCAAGTACAAGCCTGAAGACCAC
AAGGCTAGAATCTTCGGTAAACACATCGATGCTTACATGAAACACTTAAAGGGACAATCC
AACGAAGCTTTCTAAAAGCAATTCTCCAAGTGGAGCAAGACCCTCGAAGCTGCTAAGGTT
GACTCCGTTGAAAAGCTCTTCACCAAGGTCCACGCTGAAATCAGAAAGAACCCCGAAAGA
GTTAAATCTACCAAGAAGAACGATAAGCCCAAGAGAGACCACAAGAAGTTCTACCCTACC
AAGCTTACCGCTGCCCAAAGAAAAGACAGAGTTAAAACTAAGTTCCAACTTGCTCTCTCT
TAATGA>TTHERM_00736480(protein)
MGFVKVLKTKAYFKRFQTKYRRRREGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRI
IAQIVYATLKCDRVLCAADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYA
GQTKVDGAYFNVDEDQKEKKPFKAILDAGLVRTTTGNRVFGVLKGACDGGINIPHSESRF
PGYVRASDEGESSKYKPEDHKARIFGKHIDAYMKHLKGQSNEAFQKQFSKWSKTLEAAKV
DSVEKLFTKVHAEIRKNPERVKSTKKNDKPKRDHKKFYPTKLTAAQRKDRVKTKFQLALS
Q>TTHERM_00736480(gene)
ATGGTAACTCATTTTTTCTGAAATTTACTATTATATATTTAATCTAATTCCAAAATGAAT
ACTAATCATTTTATTTTATCACTCATCAACAGGGTTTCGTTAAAGTTCTCAAGACTAAGG
CTTACTTCAAGAGATTCTAAACCAAGTACAGAAGAAGAAGAGGTAAACAGCTATATTATT
TCTTTGTATCATCTCGTCTTTTCTATTCTCGCTATTTAATCGTCTCAAACAGCATCCTTC
ATCATACAATCACTCATATCTGGTGCAAATCTCCTCAATATTTAATAATGAGAGCATATC
CTACGAATAAATCGTTGATTCGTTCATAGCAAGCTTCATAAAACATGCAAATACATATTA
TTTATTGCGATTGGTTTGGCATTAACAAAAATAATTTAGCAAGATATTTATTTATTTTAG
GACTATAAGCATAATGTTATTTCAATGGTTTTTTGCTAACTACTCAGCTTGATGAATATA
ATTTGTATTCAAAAGTCAAACATTTGCAATATTTCCAGCATCTTAGCTTGCTATCAAAGC
TTTCAAACCTAAAATTAGCCTATAAACAAACAATCCAAAATATAAAGTTTTAGACATAAA
GCAAAATAGTATGAACAGAAAAAGTTAATTCAGCTTCGGTTTTGTAATAGCGTTCTCTTT
AGCATATTGTTAGCTGCTTCAAGCATACTAATTTAATAAAATTCAATTAGACGCTTTTCC
AATATCAGCAAGGCAACTTATATGAAAATAGATACCTTGATAAGGTTAAACATAATTGCA
ACTAGGTTTAGATAGGAACAAACAAACTCAAATGATTATCTTGCTTCTAAAACCAACAAA
ATAATCAACATGCATAGAAATAGGCAGAAGCAGTTCAAAGCTCCTAAATTTGCTTCATTA
TCAAGATAAATCCAAACAACAAAAGAGAGTTAGCTAATTGACAGATAGATAAATAAATAA
ACATCATAATATCCTTTATAGATATTTTTGCAAAGCATTCAAATAAAACAAAATTATTGT
ATAAAACTATTAAGCAATTGAGTGAGTGAGTGATTGATTGATTGATTGAGTGAGTGATTA
TAATATTGATGAAATATTTTCTTTGGTTGAAGAAAATGATATTGAATTAAATAAATGGGA
GAAGAAAAGACAAATAAATAGATGAAAGAATGAATAAATTTAAATATAAAAAAAAAAAAA
GATTTTAAATATTAAATATTTTAATTTAAATAGAGGGTCTCACTGATTACTACGCCAGAA
AGAGATTGATCATCCAAGATAAGGATAAATACAACACCCCCAAGTACAGATTAGTTGCTA
GAGCCACCAACACCAGAATCATCGCCTAGATCGTCTACGCTACCCTCAAGTGCGACAGAG
TCCTCTGTGCTGCTGACTCCTACGAACTCAAGAGATTCGGAGTCTCCACTGGTTTGGCTT
CCTACGCTGCTGCCTACGCCACTGGTCTCTTATTAGCCAGAAGATTGCTCAAGCAAATCG
GTTTAGACACCGTTTATGCTGGTCAAACTAAGGTTGATGGTGCCTACTTCAATGTCGATG
AAGACCAAAAGGAAAAGAAGCCCTTCAAGGCTATTTTGGATGCTGGTTTGGTCAGAACCA
CCACCGGTAACAGAGTCTTCGGTGTCTTAAAGGGTGCTTGCGATGGTGGTATTAACATCC
CCCACTCTGAAAGCAGATTCCCCGGTTACGTCAGAGCTTCTGATGAAGGTGAATCCTCCA
AGTACAAGCCTGAAGACCACAAGGCTAGAATCTTCGGTAAACACATCGATGCTTACATGA
AACACTTAAAGGGACAATCCAACGAAGCTTTCTAAAAGCAATTCTCCAAGTGGAGCAAGA
CCCTCGAAGCTGCTAAGGTTGACTCCGTTGAAAAGCTCTTCACCAAGGTCCACGCTGAAA
TCAGAAAGAACCCCGAAAGAGTTAAATCTACCAAGAAGAACGATAAGCCCAAGAGAGACC
ACAAGAAGTTCTACCCTACCAAGCTTACCGCTGCCCAAAGAAAAGACAGAGTTAAAACTA
AGTTCCAACTTGCTCTCTCTTAATGA