Identifiers and Description

Gene Model Identifier

TTHERM_00633150

Standard Name

RPL42 (Ribosomal Protein of the Large subunit #42)

Aliases

90.m00223 | PreTt27984

Description

Homolog of Yeast RPL42, Human RPL36A

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• intracellular (IEA) | GO:0005622
• ribosome (IEA) | GO:0005840

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

• ( PF00935 ) ribosomal protein L44

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10%

TetraMine Data

TTHERM_00633150

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_15802.1	2.000299424410363e-74	ribosomal protein L44 containi ng protein (110 aa)
WormBase	WBGene00004454	7.999697430377842e-40	locus:rpl-41 60S ribosomal p rotein L44 status:Confirmed UniProt:P48166 protein_id: CAA90434.1
DictyBase	DDB_G0270984	9.99723014177113e-33	rpl36a on chromosome: 1 positi on 3772004 to 3772650
SGD	YNL162W	9.99967697349061e-30	RPL42A Protein component of th e large (60S) ribosomal subuni t, identical to Rpl42Bp and ha s similarity to rat L44 riboso mal protein

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00633150(protein)
MVQVPKTRKTYCKKCNSHTNHKVSQYKKSKESTHAQGRRRYDMKQSGFGGQTKPIFRKKA
KTTKKVALKFDCTTCKTKRVIPIKRCKTIVFMDITQIKKAKVNKKDPNW

>TTHERM_00633150(coding)
ATGGTCCAAGTTCCCAAGACTAGAAAGACTTACTGCAAGAAGTGCAATTCCCACACTAAC
CACAAGGTCTCCTAATACAAGAAGTCTAAGGAATCTACCCACGCTCAAGGTAGAAGACGT
TACGACATGAAGCAATCAGGTTTTGGTGGTCAAACCAAGCCTATCTTCAGAAAGAAGGCC
AAGACTACTAAGAAGGTCGCCCTCAAGTTCGATTGTACCACCTGCAAGACTAAGAGAGTT
ATTCCCATTAAGAGATGTAAGACTATTGTTTTCATGGATATCACTCAAATCAAAAAGGCT
AAGGTCAACAAAAAGGACCCTAACTGGTGA

>TTHERM_00633150(gene)
ATGGTAATACACTTTTTCTTTAATTTTGCATGGACTGATTGACTGAATTACTTCCTTTGA
GGCTTACTGCAAGTAGTTTCAGTAGGCCTAGAAGGGCGCATACTTAGCAATTATTTAATA
GTCCATGCTATTCTTATTAAATAAATAAATTGACTTTGTTAATCATTTCATTTTTATCAT
TTAGGTCCAAGTTCCCAAGACTAGAAAGACTTACTGCAAGAAGTGCAATTCCCACACTAA
CCACAAGGTCTCCTAATACAAGAAGTCTAAGGAATCTACCCACGCTCAAGGTAATTAATC
ACAAAATTCAAATAAAATTGAAAGCAGGAAAGGCTTAGTCGTTTAAAGATATTTCGAAGG
CATCAATTTGTTTGTAGTTACGGATATTGTAATTAATCATATCATTCAAATAATAATCTC
CAAGTAGATCAAAGAGTTCTAACAAGAATTTCACAATAAAATATGTTGTTTCTTTTCAAC
TCTTCAAAATGCTAATTAATTTTTGAGAGACGAATGAATGAATGCCTATTTTGTTTTATG
GGAGAAATATTTTTATATAACATGAAGAAATATTAGATGATAAGTTTGTTTTCCTGCTTT
ATTTTGATAAATTGTAATAACATTATTAATGCTGTTTTTTATTTTCAAATTACAGGTAGA
AGACGTTACGACATGAAGCAATCAGGTTTTGGTGGTCAAACCAAGCCTATCTTCAGAAAG
AAGGCCAAGACTACTAAGAAGGTCGCCCTCAAGTAATTTAATATAAAATAAAAGTCACCA
TAACACAAGGAATTTCAAGCGAAAAATAAATAGCTCAAATATAAATTATTAAATAAAGTG
CGCATCTTAAAGAAATAAGTTATCGCTGAACAAACAAATAAACCAATTTCATTTTGATAT
TTTGATCAATCTTAGCAAACTCGCTAAATTGTAAAGAGAGCCGAATTAAGGGGAAATCAA
TCGCATCGGTTGTTAACAGAAAAGATATTTGAAAAGATTTAAATTATGTTTCTAAGGTTC
TTCTTTATCATCAACAAAAGCAAAGATTTAAAGAAAGACAAAGAGAGATAAAAATTAAGG
AATTAAAATTAAAAAAGCTTTGAAGGATAAAAAAAATAATTAAAACGATTTGATCTTAAA
ATGAAATTTGAATTAGTTGCTTTACCTAAGCATGTTATATGGCTGCTCGCAAATCAGTTT
TTTATTCTGCCTACAAGCAAGCATATATATATTTTGAAAATATTTAAAGTGAAAAACAAG
CCAAGCCAAAAAATTTAGTCAAGTTAAAAAAAATAGATAAGTTAGCAAGCAAGCAACTCT
AAGCAAAGTCAAAAAAAAAATCACTCATTATTTCATTTTAAAATATATATTGTTGTTCAG
CTGATTTAGAAATGCAAATGAGTATTTATCCTTAAAGGCTCATTAATTAAACATGCAATA
ACAAACAACTCAAATCCCTTTCATTAAAAATAAATTTTGCTCTGCTTAGGAGTTTTATGA
AAGAAATAAAAATAAATAGATAAAAAAGATATGCACCAAAATAAATATTGAGCATCCACT
ACTAACTTTTCGTTATGAACTTCCTTGAATAAAATGAAATTAATATCAATAAAATTCTTA
TATTTATTTTATTTATGAATAGGTTCGATTGTACCACCTGCAAGACTAAGAGAGTTATTC
CCATTAAGAGATGTAAGACTATTGTTTTCATGGATATCACTCAAATCAAAAAGGCTAAGG
TCAACAAAAAGGACCCTAACTGGTGA