Identifiers and Description
Gene Model Identifier
TTHERM_00339620Standard Name
RPL40 (Ribosomal Protein of the Large Subunit #40)Aliases
PreTt06103 | 34.m00340 | 3689.m00134Description
RPL40 ubiquitin/ribosomal fusion protein putative; Homolog of Yeast RPL40; RPL40-Ubiquitin fusion protein; Ribosomal L40e family proteinGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- intracellular (IEA) | GO:0005622
- ribosome (IEA) | GO:0005840
Molecular Function
- structural constituent of ribosome (IEA) | GO:0003735
Biological Process
- translation (IEA) | GO:0006412
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.6%
TetraMine Data
TTHERM_00339620
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_15096.1 1.000211181581171e-120 ribosomal L40e family protein
(174 aa)
SGD YKR094C 9.996373193201036e-79 RPL40B Fusion protein, identic
al to Rpl40Ap, that is cleaved
to yield ubiquitin and a ribo
somal protein of the large (60
S) ribosomal subunit with simi
larity to rat L40; ubiquitin m
ay facilitate assembly of the
ribosomal protein into ribosom
es
WormBase WBGene00006728 3.000074895537278e-78 locus:ubq-2 Ubiquitin-60S ri
bosomal protein L40 status:C
onfirmed UniProt:P49632 pr
otein_id:CAB04967.1
Oxytricha Contig12690.0.g68 1.9998099689916736e-77 Ubiquitin family
DictyBase DDB_G0280755 2.0007889996237956e-71 ubqB on chromosome: 3 position
3722395 to 3722781
Stentor Coeruleus SteCoe_28302 3.6251409191435593e-34
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00339620(coding)
ATGAATGAAGTGAGAAATAAGAGAAGGTAAATATTGATTAGATATAAAAAAGATCTAAGG
ATAAAAAACCAAAATAAAGAAATCAAAAATTATTAAATCAAAAAAAAAGAAATTAAAAGA
AGAAAAAAGGAAATGTAAATTTTCGTTAAGACTTTAACTGGTAAGACCATTACCTTAGAC
GTTGAAGCCTCCGACACTATTGAAAATGTCAAGGCTAAGATCCAAGATAAGGAAGGTATC
CCCCCTGATCAATAAAGACTTATCTTCGCCGGTAAGCAATTGGAAGACGGCAGAACCCTT
TCTGACTACAACATCCAAAAGGAATCTACCCTCCACTTAGTTTTGAGATTAAGAGGTGGT
GGTATGGAACCCACTATTGCTGCTCTTGCTAAGAAGTACAACTGCGAAAAGAAGGTTTGC
AGAGACTGTTATGCTAGATTACCCCCCAAAGCTACCAACTGCAGAAAGAGAAAGTGCGGT
CACTCCAACTCCCTTAGATTGAAGAAGAAACCCAAAGAGTGA>TTHERM_00339620(protein)
MNEVRNKRRQILIRYKKDLRIKNQNKEIKNYQIKKKEIKRRKKEMQIFVKTLTGKTITLD
VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
GMEPTIAALAKKYNCEKKVCRDCYARLPPKATNCRKRKCGHSNSLRLKKKPKE>TTHERM_00339620(gene)
ATGAATGAAGTGAGAAATAAGAGAAGGTAAATATTGATTAGATATAAAAAAGATCTAAGG
ATAAAAAACCAAAATAAAGAAATCAAAAATTATTAAATCAAAAAAAAAGAAATTAAAAGA
AGAAAAAAGGAAATGTAAATTTTCGTTAAGACTTTAACTGGTAAGACCATTACCTTAGAC
GTTGAAGCCTCCGACACTATTGAAAATGTCAAGGCTAAGATCCAAGATAAGGAAGGTATC
CCCCCTGATCAATAAAGACTTATCTTCGCCGGTAAGCAATTGGAAGACGGCAGAACCCTT
TCTGACTACAACATCCAAAAGGAATCTACCCTCCACTTAGTTTTGAGATTAAGAGGTGGT
GGTATGGAACCCACTATTGCTGCTCTTGCTAAGAAGTACAACTGCGAAAAGAAGGTTTGC
AGAGACTGTTATGCTAGATTACCCCCCAAAGCTACCAACTGCAGAAAGAGAAAGTGCGGT
CACTCCAACTCCCTTAGATTGAAGAAGAAACCCAAAGAGTGA