Identifiers and Description

Gene Model Identifier

TTHERM_00812780

Standard Name

RPL38 (Ribosomal Protein of the Large subunit #38)

Aliases

PreTt29984 | 138.m00104

Description

RPL38 60S ribosomal protein L38; Homolog of Yeast RPL38

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• intracellular (IEA) | GO:0005622
• ribosome (IEA) | GO:0005840

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

• ( PF01781 ) ribosomal L38e protein family

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 11.1%

TetraMine Data

TTHERM_00812780

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_02998.1	5.997418848378574e-45	hypothetical protein (90 aa)
DictyBase	DDB_G0268302	0.00000030014504373857585	rpl38 on chromosome: 1 positio n 485945 to 486391
Oxytricha	Contig6413.0.g98	0.0000029996948234116693	Ribosomal L38e protein family
WormBase	WBGene00004452	0.000019995566179747357	locus:rpl-38 60S ribosomal p rotein L38 status:Confirmed UniProt:O17570 protein_id: CAB03853.1
SGD	YLR325C	0.000019995566179747357	RPL38 Protein component of the large (60S) ribosomal subunit , has similarity to rat L38 ri bosomal protein

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00812780(coding)
ATGAGCATTTATAATGGAAAATAGTATTTGTTTTGTTTAAGATTAATAAACAAAAGAAAG
GAAGGACACAGATAACAAAGGAAAAGGATATAATTTTAATTAAGACTATATTAGATAGAA
AAATAATTAACAAGGAAAAAGGGGCAAAAAAGTTAAGAAAAAAAAAAAAAGTTAAAATAA
ACTAAAAAAATCAAAAATACACAGTACAAAATAGATATATTAGAAATGCCTAAGGAAATC
ACTGACATCAAGAAGTTCATGAAGCTTTGGTAAAACAACAAGGACACCCCCGCCACTGCT
GGTGCCAAGAAGGTTGTCTACGTTAAGACCAATAAGAGAATCACCAAGTTCAAACTTAGA
GGCAAGAAGTACTTATACACCTTCAAGACTGCTGACCCCAAGATCGCCAAGGGTATTAAA
GACGCTATCCCTGCTACCTATTCTAAGATCGAAATTAAGGGAAAGAACACCAAGAAGGCT
ACTAAGAGATCTTGA

>TTHERM_00812780(protein)
MSIYNGKQYLFCLRLINKRKEGHRQQRKRIQFQLRLYQIEKQLTRKKGQKSQEKKKKLKQ
TKKIKNTQYKIDILEMPKEITDIKKFMKLWQNNKDTPATAGAKKVVYVKTNKRITKFKLR
GKKYLYTFKTADPKIAKGIKDAIPATYSKIEIKGKNTKKATKRS

>TTHERM_00812780(gene)
ATGAGCATTTATAATGGAAAATAGTATTTGTTTTGTTTAAGATTAATAAACAAAAGAAAG
GAAGGACACAGATAACAAAGGAAAAGGATATAATTTTAATTAAGACTATATTAGATAGAA
AAATAATTAACAAGGAAAAAGGGGCAAAAAAGTTAAGAAAAAAAAAAAAAGTTAAAATAA
ACTAAAAAAATCAAAAATACACAGTACAAAATAGATATATTAGAAATGGTAATTAACATT
AAAATTCTTTCTTTTAAATTTTAATGAACCCCCAAACAGTTTCGAAAGTCAGTTAAACTA
CAAGGTCTGCCATTTCTTAGAATAGAATTTAACATAAAGAATCACTGAATATATAACTCA
TAAACTTATCTCACTAACAATTTGCAGTCCCTCTTCACTCACTCACTCACAAATTCATTC
ATTCACAATTATCAAAATATCAATTTATTTTATTTCAGTTAATTGCATTACTAAATGAAT
TCCTCTAGATTGCAATTAAATTTTCTGTTTTTACATGAAGTTAGTATTTCTCATCTTATC
GCACTTAACCACATTTAAAGAATAGCGAAAATGGGATAGAGCATTCATCTTAAATACTTG
ATTACTGCTAAATGTAGAGCATAAATCTGGTATTTATTAACAAAATAGATACATTAAGAA
GAGATAAAGCAGAAATTAAATCATGTGAATTATAAATATTTATCAAAGCAAAAGCAATTA
GCGAAAGCAATTAGTTTCAATAAATTTAATGCCAAGGCATCTAGGATACGTTTGTATTTT
GCTCCCAAAAAAAAAAATTTAGGAGAAATAGTTAGCAAATGATTTAATAATCAATAAATA
AATGAACGAATGAACATGAGGGAATTAATAAATAAATGATTGTATTAAGGAGTAAATATA
CAACAGGGAATTAATTCTAATTAGAATATAAAATAGAAATTTAGAAGAATGAGTTTTTGC
GTTTAAATTGTATCAAAAAGAAATGGTATAGACGATTGATTCTGTTTGCTAGGGCATTTA
TGCATATTTTCAATTTATTGTATCCTTTATTAAAATAATATTATTTAATTAATAGCCTAA
GGAAATCACTGACATCAAGAAGTTCATGAAGCTTTGGTAAAACAACAAGGACACCCCCGC
CACTGCTGGTGCCAAGAAGGTTGTCTACGTTAAGACCAATAAGAGAATCACCAAGTTCAA
ACTTAGAGGCAAGAAGTACTTATACACCTTCAAGACTGCTGACCCCAAGATCGCCAAGGG
TATTAAAGACGCTATCCCTGCTAGTAATAATTCATTAAAAATATTTAGCACGAAATTACA
AATTTAGTGAGTGAGTTAATTTATTATAACTCTAATCACGCTTTTGAGCAATTAGAAGCA
ATTAATAAATAATTAAAAGGTCTTTCCTACCTCCAACCATTCCTCTCTTTATTCCTGCTT
AAAGTTTTATAAATAATTAGGAAACCTATAAATAATTTTTAAATGATTTATTAAAATATA
TATTTATTAATGAGTTTATTTTAAAAAAATAGCCTATTCTAAGATCGAAATTAAGGGAAA
GAACACCAAGAAGGCTACTAAGAGATCTTGA