Identifiers and Description

Gene Model Identifier

TTHERM_00297140

Standard Name

RPL23 (Ribosomal Protein of the Large subunit #23)

Aliases

PreTt15725 | 27.m00385 | 3692.m00187 | RPL14

Description

Homolog of Yeast RPL23, Human RPL23, Bacteria RPL14; Ribosomal protein L14p/L23e containing protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• ribosome (IEA) | GO:0005840
• intracellular (IEA) | GO:0005622

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

• ( TIGR01067 ) ribosomal protein L14
• ( PF00238 ) Ribosomal protein L14p/L23e

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 17.5%

TetraMine Data

TTHERM_00297140

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_08866.1	1.9995541014149208e-99	ribosomal protein L14p/L23e co ntaining protein (142 aa)
WormBase	WBGene00004435	5.001369568193564e-73	locus:rpl-23 60S ribosomal p rotein L23 status:Confirmed UniProt:P48158 protein_id: CCD61530.1
SGD	YER117W	2.999277470785175e-69	RPL23B Protein component of th e large (60S) ribosomal subuni t, identical to Rpl23Ap and ha s similarity to E. coli L14 an d rat L23 ribosomal proteins
DictyBase	DDB_G0290315	2.9995010303521745e-64	rpl23 on chromosome: 5 positio n 3946402 to 3947228
Oxytricha	Contig861.1.g24	1.0002758036576784e-62	Ribosomal protein L14p/L23e
Stentor Coeruleus	SteCoe_34785	4.359610000063081e-28

General Information

No Data fetched for General Information

Associated Literature

1. Ref:22052974: Klinge S, Voigts-Hoffmann F, Leibundgut M, Arpagaus S, Ban N (2011) Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6. Science (New York, N.Y.) 334(6058):941-8

Sequences

>TTHERM_00297140(coding)
ATGGCTGCTGCTAGAGGTAGAGGTGGTTAAGTCGGTACCAAGGCTAAAGTTTCCTTGGGT
CTTCCCGTCGGTGCTGTTATGAACTGCGCTGATAACTCCGGTGCTAAGAACTTATATACT
ATTGCTTGTTTCGGTATCAAGGGTCACTTGAGCAAGCTCCCCAGTGCTTCCATTGGTGAT
ATGATTCTCTGCTCCGTCAAGAAGGGTTCCCCCAAGCTCAGAAAGAAAGTTCTCTAAGCT
ATCGTCATCAGACAAAGAAGACCCTGGAGAAGAAGAGATGGTGTCTTCATCTACTTCGAA
GATAATGCTGGTGTTATTGCTAACCCCAAGGGTGAAATGAAGGGTTCCCAAATCACTGGT
CCCGTCGCCAAGGAATGTGCTGACATCTGGCCCAAGGTTGCTTCCAACGCTGGTTCCGTT
GTTTGA

>TTHERM_00297140(protein)
MAAARGRGGQVGTKAKVSLGLPVGAVMNCADNSGAKNLYTIACFGIKGHLSKLPSASIGD
MILCSVKKGSPKLRKKVLQAIVIRQRRPWRRRDGVFIYFEDNAGVIANPKGEMKGSQITG
PVAKECADIWPKVASNAGSVV

>TTHERM_00297140(gene)
ATGGCTGCTGCTAGAGGTAATTTTAACTTAAATTTGTATTGATCAATTTCACAAATTTTT
CATCCAGCCAGCTCAATGTTTTCGCATCATCATAAAGTCTCATAAAAAATATGGAAGCAC
TAATTGCAGTTAAATGCCTTTATACAAAGCTAAAATTTTCATTAAATTCTACAGATTTAT
AAGGAAATGTCTCTTTGATGCAAATAATAATTTGATGTTAAAATTAATATTTAATATGAA
TTGAGATAAGCAAAAAAAGTGGGCCTGATAAGCTTATGAATTTATATAAAGCGAATAAAA
TGCAGGATATTTAAATTAATTAGATAGATGTGTTGGACTTTGAAAAGTTGGATGAAAAAT
TGAATTTTAGGAGAAGATAAACAAACCATTAATTGATATTGATTAATTTGGTTGTTTTTC
ATAAATACAAAATTTTAAAATATGGATTAATTGAAATTAAATTTAAATTACTTAAATTAT
AGGTAGAGGTGGTTAAGTCGGTACCAAGGCTAAAGTTTCCTTGGGTCTTCCCGTCGGTGC
TGTTATGAACTGCGCTGATAACTCCGGTGCTAAGAACTTATATACTATTGCTTGTTTCGG
TATCAAGGGTCACTTGAGCAAGCTCCCCAGTGCTTCCATTGGTGATATGATTCTCTGCTC
CGTCAAGAAGGGTTCCCCCAAGCTCAGAAAGAAAGGTAAACTATAAAATAACAATTTTTA
AAAACTAATTCTAATTTAATTATTTAACTAATAGTTCTCTAAGCTATCGTCATCAGACAA
AGAAGACCCTGGAGAAGAAGAGATGGTGTCTTCATCTACTTCGAAGGTGAATAATTTTAA
ATATTTTAAATACAAGGCATAAAATGAAAACGAAAAAATCATTAATCCCAATTTATTAAA
AAAGTGATAAGTCTTGCAAAGATGTTATTAAATAATTACAAATATAAAGATGAGTAGATT
AGGCAAAAATAATAAAAATTAAATCATTAGTAATAACTAAATAGAGTATAGTTATCAAAT
CAAAATAAATTAAGCCTTATGTCGTGTTACATAAGAGAAAAATTAGCATTAAAAATAATA
TTGTAGAAAATTTGACAAATGTCACTCACTCACTATCTTCTTATTCAAGACTTTATCAGC
AAATAAATATATTCAAATTTAGCTTCAGAAAATGCTAAGTAGAATTTATAGCATTATTTT
ATTAATTGGTAAAAATAGAATCAATCAATAAATAAATAAATTATTGACTAAATATTTGTT
TATTTTACCAATTTAGAAATAAATAGAGGGATAAATGAATTTTTTCATTTTACATTGAAC
ATCTTTAATATTTTTTTGGAATAAGTATTCAATTTTTTTTTTATTTATATAGATAATGCT
GGTGTTATTGCTAACCCCAAGGGTGAAATGAAGGGTTCCCAAATCACTGGTCCCGTCGCC
AAGGAATGTGCTGACATCTGGCCCAAGGTTGCTTCCAACGCTGGTTCCGTTGTTTGA