Identifiers and Description
Gene Model Identifier
TTHERM_00297140Standard Name
RPL23 (Ribosomal Protein of the Large subunit #23)Aliases
PreTt15725 | 27.m00385 | 3692.m00187 | RPL14Description
RPL23 60S ribosomal protein L23; Homolog of Yeast RPL23- Human RPL23- Bacteria RPL14; Ribosomal protein L14p/L23e containing proteinGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- intracellular (IEA) | GO:0005622
- ribosome (IEA) | GO:0005840
Molecular Function
- structural constituent of ribosome (IEA) | GO:0003735
Biological Process
- translation (IEA) | GO:0006412
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 17.5%
TetraMine Data
TTHERM_00297140
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_08866.1 1.9995541014149208e-99 ribosomal protein L14p/L23e co
ntaining protein (142 aa)
WormBase WBGene00004435 5.001369568193564e-73 locus:rpl-23 60S ribosomal p
rotein L23 status:Confirmed
UniProt:P48158 protein_id:
CCD61530.1
SGD YER117W 2.999277470785175e-69 RPL23B Protein component of th
e large (60S) ribosomal subuni
t, identical to Rpl23Ap and ha
s similarity to E. coli L14 an
d rat L23 ribosomal proteins
DictyBase DDB_G0290315 2.9995010303521745e-64 rpl23 on chromosome: 5 positio
n 3946402 to 3947228
Oxytricha Contig861.1.g24 1.0002758036576784e-62 Ribosomal protein L14p/L23e
Stentor Coeruleus SteCoe_34785 4.359610000063081e-28
General Information
No Data fetched for General Information
Associated Literature
- Ref:22052974: Klinge S, Voigts-Hoffmann F, Leibundgut M, Arpagaus S, Ban N (2011) Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6. Science (New York, N.Y.) 334(6058):941-8
Sequences
>TTHERM_00297140(coding)
ATGGCTGCTGCTAGAGGTAGAGGTGGTTAAGTCGGTACCAAGGCTAAAGTTTCCTTGGGT
CTTCCCGTCGGTGCTGTTATGAACTGCGCTGATAACTCCGGTGCTAAGAACTTATATACT
ATTGCTTGTTTCGGTATCAAGGGTCACTTGAGCAAGCTCCCCAGTGCTTCCATTGGTGAT
ATGATTCTCTGCTCCGTCAAGAAGGGTTCCCCCAAGCTCAGAAAGAAAGTTCTCTAAGCT
ATCGTCATCAGACAAAGAAGACCCTGGAGAAGAAGAGATGGTGTCTTCATCTACTTCGAA
GATAATGCTGGTGTTATTGCTAACCCCAAGGGTGAAATGAAGGGTTCCCAAATCACTGGT
CCCGTCGCCAAGGAATGTGCTGACATCTGGCCCAAGGTTGCTTCCAACGCTGGTTCCGTT
GTTTGA>TTHERM_00297140(protein)
MAAARGRGGQVGTKAKVSLGLPVGAVMNCADNSGAKNLYTIACFGIKGHLSKLPSASIGD
MILCSVKKGSPKLRKKVLQAIVIRQRRPWRRRDGVFIYFEDNAGVIANPKGEMKGSQITG
PVAKECADIWPKVASNAGSVV>TTHERM_00297140(gene)
ATGGCTGCTGCTAGAGGTAATTTTAACTTAAATTTGTATTGATCAATTTCACAAATTTTT
CATCCAGCCAGCTCAATGTTTTCGCATCATCATAAAGTCTCATAAAAAATATGGAAGCAC
TAATTGCAGTTAAATGCCTTTATACAAAGCTAAAATTTTCATTAAATTCTACAGATTTAT
AAGGAAATGTCTCTTTGATGCAAATAATAATTTGATGTTAAAATTAATATTTAATATGAA
TTGAGATAAGCAAAAAAAGTGGGCCTGATAAGCTTATGAATTTATATAAAGCGAATAAAA
TGCAGGATATTTAAATTAATTAGATAGATGTGTTGGACTTTGAAAAGTTGGATGAAAAAT
TGAATTTTAGGAGAAGATAAACAAACCATTAATTGATATTGATTAATTTGGTTGTTTTTC
ATAAATACAAAATTTTAAAATATGGATTAATTGAAATTAAATTTAAATTACTTAAATTAT
AGGTAGAGGTGGTTAAGTCGGTACCAAGGCTAAAGTTTCCTTGGGTCTTCCCGTCGGTGC
TGTTATGAACTGCGCTGATAACTCCGGTGCTAAGAACTTATATACTATTGCTTGTTTCGG
TATCAAGGGTCACTTGAGCAAGCTCCCCAGTGCTTCCATTGGTGATATGATTCTCTGCTC
CGTCAAGAAGGGTTCCCCCAAGCTCAGAAAGAAAGGTAAACTATAAAATAACAATTTTTA
AAAACTAATTCTAATTTAATTATTTAACTAATAGTTCTCTAAGCTATCGTCATCAGACAA
AGAAGACCCTGGAGAAGAAGAGATGGTGTCTTCATCTACTTCGAAGGTGAATAATTTTAA
ATATTTTAAATACAAGGCATAAAATGAAAACGAAAAAATCATTAATCCCAATTTATTAAA
AAAGTGATAAGTCTTGCAAAGATGTTATTAAATAATTACAAATATAAAGATGAGTAGATT
AGGCAAAAATAATAAAAATTAAATCATTAGTAATAACTAAATAGAGTATAGTTATCAAAT
CAAAATAAATTAAGCCTTATGTCGTGTTACATAAGAGAAAAATTAGCATTAAAAATAATA
TTGTAGAAAATTTGACAAATGTCACTCACTCACTATCTTCTTATTCAAGACTTTATCAGC
AAATAAATATATTCAAATTTAGCTTCAGAAAATGCTAAGTAGAATTTATAGCATTATTTT
ATTAATTGGTAAAAATAGAATCAATCAATAAATAAATAAATTATTGACTAAATATTTGTT
TATTTTACCAATTTAGAAATAAATAGAGGGATAAATGAATTTTTTCATTTTACATTGAAC
ATCTTTAATATTTTTTTGGAATAAGTATTCAATTTTTTTTTTATTTATATAGATAATGCT
GGTGTTATTGCTAACCCCAAGGGTGAAATGAAGGGTTCCCAAATCACTGGTCCCGTCGCC
AAGGAATGTGCTGACATCTGGCCCAAGGTTGCTTCCAACGCTGGTTCCGTTGTTTGA