Identifiers and Description

Gene Model Identifier

TTHERM_00227270

Standard Name

RPL22 (Ribosomal Protein of the Large subunit #22)

Aliases

PreTt12537 | 19.m00329 | RPL22e

Description

Homolog of Yeast RPL22, Human RPL22

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• ribosome (IEA) | GO:0005840
• intracellular (IEA) | GO:0005622

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

• ( PF01776 ) ribosomal L22e protein family

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.1%

TetraMine Data

TTHERM_00227270

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_05502.1	7.001368147796582e-60	ribosomal protein L22 (120 aa)
Oxytricha	Contig20556.0.g59	2.0006622580855403e-35	Ribosomal L22e protein family
WormBase	WBGene00004434	2.998577119979921e-31	locus:rpl-22 60S ribosomal p rotein L22 status:Confirmed UniProt:P52819 protein_id: CCD63067.1
DictyBase	DDB_G0288101	7.001594317853847e-31	rpl22 on chromosome: 5 positio n 1106395 to 1107007
Stentor Coeruleus	SteCoe_14741	6.305116760146989e-16
SGD	YLR061W	0.0000000000005000841553255702	RPL22A Protein component of th e large (60S) ribosomal subuni t, has similarity to Rpl22Bp a nd to rat L22 ribosomal protei n

General Information

No Data fetched for General Information

Associated Literature

1. Ref:22052974: Klinge S, Voigts-Hoffmann F, Leibundgut M, Arpagaus S, Ban N (2011) Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6. Science (New York, N.Y.) 334(6058):941-8

Sequences

>TTHERM_00227270(coding)
ATGTCATTCAGAAAGAAAACTAAGTAAGTCAAGAAGGTTAACTTGGGCTTCAAGATCGAC
TGCTCTCAACCCGTTGAAGATAAGGTCATCCTTATCGGTGAATTCGCCGAATTCTTGAAA
TCCAAGATTAAAGTCGGTGGTAAGCTCGGTAACTTGGGTGAAAACATCACCATCAGCAAC
GATGACAAGAAGATTAACGTCTAATCCACCATCCCCTTCTCCAAGAGATACCTTAAGTAC
TTAACCAAGAAGTACCTTAAGAAGTAAGACTTGAGAAACTATCTCTACGTCACCTCTTCT
GACAAGAACTCTTACCAACTTAGATATTTCAACATTCAATAAGACCAAGCTGAGTGA

>TTHERM_00227270(protein)
MSFRKKTKQVKKVNLGFKIDCSQPVEDKVILIGEFAEFLKSKIKVGGKLGNLGENITISN
DDKKINVQSTIPFSKRYLKYLTKKYLKKQDLRNYLYVTSSDKNSYQLRYFNIQQDQAE

>TTHERM_00227270(gene)
ATGTCATTCAGAAAGAAAACTAAGTAAGTCAAGAAGGTTAACTTGGGCTTCAAGATCGAC
TGCTCTCAACCCGTTGAAGATAAGGTCATCCTTATCGGTGAATTCGCCGAATTCTTGAAA
TCCAAGATTAAAGTCGGTGGTAAGCTCGGTAACTTGGGTGAAAACATCACCATCAGCAAC
GATGACAAGAAGATTAACGTCTAATCCACCATCCCCTTCTCCAAGAGATACCTTAAGTAC
TTAACCAAGAAGTACCTTAAGAAGTAAGACTTGAGAAACTATCTCTACGTCACCTCTTCT
GACAAGAACTCTTACCAACTTAGATATTTCAACATTCAATAAGACCAAGCTGAGTGA