Identifiers and Description

Gene Model Identifier

TTHERM_01289110

Standard Name

RPL15 (Ribosomal protein of the large subunit)

Aliases

PreTt20220 | PreTt20221 | 310.m00045 | RPL15e

Description

Homolog of yeast RPL15 (/RPL15e)

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• ribosome (IEA) | GO:0005840
• intracellular (IEA) | GO:0005622

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

• ( PF00827 ) ribosomal L15

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.8%

TetraMine Data

TTHERM_01289110

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_20962.1	7.002403107011161e-144	ribosomal protein L15 (205 aa)
DictyBase	DDB_G0272893	9.001701800865775e-93	rpl15-1 on chromosome: 2 posit ion 2395262 to 2396133
SGD	YLR029C	1.999022616705709e-90	RPL15A Protein component of th e large (60S) ribosomal subuni t, nearly identical to Rpl15Bp and has similarity to rat L15 ribosomal protein; binds to 5 .8 S rRNA
Oxytricha	Contig10140.0.g47	7.001141985045207e-89	Ribosomal L15
WormBase	WBGene00004427	8.00275873087502e-68	locus:rpl-15 60S ribosomal p rotein L15 status:Confirmed UniProt:P91374 protein_id: CCD70971.1
Stentor Coeruleus	SteCoe_33068	7.47197233734299e-43

General Information

No Data fetched for General Information

Associated Literature

1. Ref:22052974: Klinge S, Voigts-Hoffmann F, Leibundgut M, Arpagaus S, Ban N (2011) Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6. Science (New York, N.Y.) 334(6058):941-8

Sequences

>TTHERM_01289110(protein)
MGAYKYLEELWRKKQSDLMSFILRLRTWEYRQLPVIHKASRSSRPDKARKLGYKNKDGYA
IWRVRVRRGGRKRPVSKGIVYGKPSSVGINQLKFARNLRSCAEERVGKRVPELRVLNSYW
VGQDGTYKFYEVILADPSHNAIRNDPRINWICESAHKHRELRGLTSAGRKGRGLRVKGHR
AKSLRTSRKGNWRARQMLKLRRYR

>TTHERM_01289110(coding)
ATGGGTGCCTACAAATATTTGGAAGAATTATGGAGAAAGAAGCAATCTGATCTCATGTCC
TTCATTTTGCGTCTTAGAACCTGGGAATACAGACAATTACCCGTCATCCACAAGGCTTCT
AGATCCTCCAGACCCGACAAGGCTAGAAAGTTGGGTTACAAGAACAAGGATGGTTACGCT
ATCTGGAGAGTCAGAGTCAGAAGAGGTGGTAGAAAGAGACCTGTCTCCAAGGGTATCGTT
TACGGTAAGCCCTCCAGTGTTGGTATCAACCAATTGAAGTTCGCCAGAAACCTCAGATCT
TGCGCTGAAGAAAGAGTCGGTAAGAGAGTCCCTGAATTAAGAGTCCTCAACTCTTACTGG
GTTGGTCAAGACGGTACCTACAAGTTCTACGAAGTTATCCTCGCTGATCCCTCTCACAAC
GCCATCAGAAACGACCCCAGAATCAACTGGATCTGTGAATCTGCTCACAAGCACAGAGAA
TTAAGAGGTCTTACCTCCGCTGGTAGAAAGGGTAGAGGTCTCAGAGTTAAGGGCCACAGA
GCTAAATCTCTCAGAACCTCCAGAAAGGGTAACTGGAGAGCTAGACAAATGCTCAAGCTC
AGAAGATACCGTTGA

>TTHERM_01289110(gene)
ATGGGTGCCTACAAATATTTGGAAGAATTATGGAGAAAGAAGCAATCTGATCTCATGTCC
TTCATTTTGCGTCTTAGAACCTGGGAATACAGACAATTACCCGTCATCCACAAGGCTTCT
AGATCCTCCAGACCCGACAAGGCTAGAAAGTTGGGTTACAAGAACAAGGATGGTTACGCT
ATCTGGAGAGTCAGAGTCAGAAGAGGTGGTAGAAAGAGACCTGTCTCCAAGGGTATCGTT
TACGGTAAGCCCTCCAGTGTTGGTATCAACCAATTGAAGTTCGCCAGAAACCTCAGATCT
TGCGCTGAAGAAAGAGTCGGTAAGAGAGTCCCTGAATTAAGAGTCCTCAACTCTTACTGG
GTTGGTCAAGACGGTACCTACAAGTTCTACGAAGTTATCCTCGCTGATCCCTCTCACAAC
GCCATCAGAAACGACCCCAGAATCAACTGGATCTGTGAATCTGCTCACAAGCACAGAGAA
TTAAGAGGTAATTATCAAATTATTTAGCATTCTTAATAGAAAATTTTCTAGTTTTCATGA
TAGCTTTGTTATTTATTCACTTGCTACTCGATTTAGATGCAAATCAATTTAAGTGGATGA
TAGTTAATTTGTTGATTTTAAAGAAAACACAAATTCTGAAAATAAACCTTAGCATGTGAA
TATAAAATGCAATTAAATTATTGTCCTAAGCATTTGAATTGCTTGATTAATGCTAATAAA
TTCACTATCTACTTTATATTAAGGGAGATTAGATTTGATATACTTGATAATTATACTATT
TACTCAATTTTCCTTTTCGATCGATTGGTTTAGCTAACGATAATTTGCATGAATTTCTTT
AATAATGAATTGATTCATTGATTGATTAAATACACATGAAATCATCAATATCTAAAGCAT
TGATAACCAAATGGAAAAAATTGAAGGATGTAGCATGAATAAAACAAAGCTAGATTGATA
AACTTAATTTTAATAAAAAATTCATTTATTTATATTTAGTTTTAAAGTAAACTTGTTACT
AATTATTTTTTTAACATTACAGGTCTTACCTCCGCTGGTAGAAAGGGTAGAGGTCTCAGA
GTTAAGGGCCACAGAGCTAAATCTCTCAGAACCTCCAGAAAGGGTAACTGGAGAGCTAGA
CAAATGCTCAAGCTCAGAAGATACCGTTGA