Identifiers and Description
Gene Model Identifier
TTHERM_00578640Standard Name
RPL13 (Ribosomal protein of the large subunit)Aliases
78.m00129 | PreTt05757 | 3733.m00024Description
RPL13 60S ribosomal protein L13; Homolog of yeast RPL13/(RPL13e)Genome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- ribosome (IEA) | GO:0005840
- intracellular (IEA) | GO:0005622
Molecular Function
- structural constituent of ribosome (IEA) | GO:0003735
Biological Process
- translation (IEA) | GO:0006412
Domains
- ( PF01294 ) ribosomal protein L13e
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.5%
TetraMine Data
TTHERM_00578640
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_16289.1 1.9990002532767049e-131 ribosomal protein L13e contain
ing protein (205 aa)
Oxytricha Contig4065.0.1.g96 3.000458792073453e-56 Ribosomal protein L13e
DictyBase DDB_G0291870 2.9993743585281133e-40 rpl13 on chromosome: 6 positio
n 852689 to 853474
WormBase WBGene00004425 7.003455847728069e-40 locus:rpl-13 60S ribosomal p
rotein L13 status:Confirmed
UniProt:P91128 protein_id:
CCD66399.1
SGD YDL082W 5.002276765025871e-34 RPL13A Protein component of th
e large (60S) ribosomal subuni
t, nearly identical to Rpl13Bp
; not essential for viability;
has similarity to rat L13 rib
osomal protein
Stentor Coeruleus SteCoe_23192 2.1151310375910805e-19
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00578640(protein)
MKHNNQLPVAQLRKHQQFRIKTFFNQAAQKKARLHARRAQAAAVFPRPTEKLQPVVRKQT
QRYNKSTKLGRGFTLQELKAAGISAAFAQSIGIKVDHRRKNRCQESLELNKKRLLAYVSK
LVLFPRHQGKAKKGLVNDTADTSSAAQNALQTSVPLPSVSKREKAVSNIAELRKKKVYRI
IRQEKTNQKWDGKRKAKAQAAAEPKA>TTHERM_00578640(coding)
ATGAAGCACAACAATCAATTACCCGTTGCCTAATTAAGAAAGCATTAATAATTCAGAATT
AAAACTTTCTTCAACCAAGCTGCCTAAAAGAAGGCTAGATTACATGCCAGAAGAGCTTAA
GCCGCCGCTGTCTTCCCCAGACCTACTGAAAAGTTACAACCTGTTGTTAGAAAGCAAACC
CAAAGATACAACAAGTCCACCAAGCTCGGAAGAGGTTTCACCTTACAAGAATTGAAGGCT
GCCGGTATCTCTGCCGCTTTTGCCTAATCTATTGGTATCAAGGTTGACCACAGAAGAAAG
AACAGATGTCAAGAATCTCTTGAATTAAACAAGAAGAGACTTTTGGCTTACGTTAGCAAG
CTCGTTCTCTTCCCTAGACACTAAGGTAAGGCCAAGAAGGGTTTAGTTAATGACACCGCT
GACACCAGCAGTGCTGCTCAAAACGCCTTATAAACCTCTGTTCCTCTTCCCTCTGTCTCC
AAGAGAGAAAAGGCTGTTTCCAACATCGCTGAACTCAGAAAGAAGAAGGTTTACAGAATC
ATCAGACAAGAAAAGACCAACCAAAAGTGGGATGGAAAGAGAAAGGCTAAAGCTCAAGCT
GCCGCTGAACCCAAGGCATGA>TTHERM_00578640(gene)
ATGAAGCACAACAATCAATTACCCGTTGCCTAATTAAGAAAGCATTAATAATTCAGAATT
AAAACTTTCTTCAACCAAGCTGCCTAAAAGAAGGCTAGATTACATGCCAGAAGAGCTTAA
GCCGCCGCTGTCTTCCCCAGACCTACTGAAAAGTTACAACCTGTTGTTAGAAAGCAAACC
CAAAGGTGAATATCTATCATTCAATCCAAATTAAATCACAAACCGATCACCATTTTTTTC
TTAAAAATTATTGATTCAAAATACAAATATGCATTTTACTTTTTCATTTTACAATTTCCA
TCGAACTCTAAAAGATGGGACAGCTTCCCATGCAATTGTATTTTTTTACAGTTCGTTTTA
ACCAAATAAATGCTGGTCAATCGCTCAGTCAATAAATCAATCAATTAAAGAGTCAATTAA
ATAAAAAAATCACTAGAATTAGGGTAACTTAATCGAATAGATATTTCATTCTTAAGTTAG
CAGATGAATTTAAAATTGTAATAGAAATATAATTAAATGCGGAATACTTTTTAACAAAAT
GGAATTCAATCATAACCTGTATTGCGGAAATCTAGTAAAGTAGATTTAGCTTCTGATTTA
TCTGATTGTTAGATTTGAAATATCATCAGCCTTTAATTAGGTTTTAACTAAATAAATGTA
AATAACACAATTTAGGTATTCTAAAACTTCTCAATAAAGAATATAATCAGTAGACATTAT
GCCAACATATTTAGCAAAGAATATAAAAGCAATTTATGTATACAGTAGATCGATTAATTG
ATTAGGTAGGGAGTCTTAGCGTCAATCAAAGATCAAGTAGATCATTTGGTTTCTAATAAA
TTTAAGCAAGCTAAATTATAAAATATCTAAATACAAATTTAAAAAGACGAAATTATCAAA
ACTCATAAATGAATGATGATGAAATAATTTAAATAGAGCAACTTGTAATATTTGTTCAAT
GAAAAAAAAATATGCAAAATAAAGCCGCCAAATATTTAAAAATTTAGGCATGTTAGGGTA
CATTAAATACTCATTTATCAAAACTCAAATAAACCTTATTGATTGAATGAAATAATTACT
TGCATAATAATTAAAATTGATTGATTCATGATAATGACTGTTTAATTGATTGATTGAAGC
TGAAATATTTAGGAATTGAATATAATTGTAAAAACAATTTAAATTCTACAAAAAAGTTTA
ATAAGGTTAAAACTAAAAGTAAATATAATCCATTCATTTAAAGTTTAATCTTTAAATTAA
GTGAAATCATGCATATTATTTTTGAATGCTTTACAAAATTAAATCGCAATAAAAATAAGA
ATAAAAATAAATACTGATTGGTTTAAACTTCAATTATTTATTAATAAATTTTACTCATCT
ATTTTCTATTAAATTTAGATACAACAAGTCCACCAAGCTCGGAAGAGGTTTCACCTTACA
AGAATTGAAGGCTGCCGGTATCTCTGCCGCTTTTGCCTAATCTATTGGTATCAAGGTTGA
CCACAGAAGAAAGAACAGATGTCAAGAATCTCTTGAATTAAACAAGAAGAGACTTTTGGC
TTACGTTAGCAAGCTCGTTCTCTTCCCTAGGTAAATAAAGAAACATTAATAAATTTTATT
AGCAAATATAAAGAAATAGGCATAGTATTTTTGTATATATCATTTAAATACCTTCAAATA
ATTTACAAGTTAAGCAATTAGATTATGAATTTTAATCTAAAAATTTTAACTTACTTACCA
TTTTATTTGATTTGTATTTTAACTGAGCAAAAATACTTACTGAATATATATATATATATT
TATATGCAAACTAGCCTAAAGATATTTGCAAGAAATTAATATCTGTAATATGGCAATTTC
TTATCTTTATTTTTAATAAAAATAGACACTAAGGTAAGGCCAAGAAGGGTTTAGTTAATG
ACACCGCTGACACCAGCAGTGCTGCTCAAAACGCCTTATAAACCTCTGTTCCTCTTCCCT
CTGTCTCCAAGAGAGAAAAGGCTGTTTCCAACATCGCTGAACTCAGAAAGAAGAAGGTTT
ACAGAATCATCAGACAAGAAAAGACCAACCAAAAGTGGGATGGAAAGAGAAAGGCTAAAG
CTCAAGCTGCCGCTGAACCCAAGGCATGA