Identifiers and Description

Gene Model Identifier

TTHERM_00829380

Standard Name

RPL11 (Ribosomal protein of the large subunit)

Aliases

PreTt14117 | PreTt14116 | 144.m00135 | RPL5-E.coli

Description

Homolog of yeast RPL11(/RPL5)and E.coli RPL5

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• intracellular (IEA) | GO:0005622
• ribosome (IEA) | GO:0005840

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

• ( PF00281 ) ribosomal protein L5
• ( PF00673 ) ribosomal L5P family C-terminus

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 12.2%

TetraMine Data

TTHERM_00829380

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_10203.1	4.9996115996408327e-110	60S ribosomal protein L11 (173 aa)
Oxytricha	Contig19511.0.g119	2.0008312485874125e-83	ribosomal L5P family C-terminu s
SGD	YGR085C	1.9996609186508915e-82	RPL11B Protein component of th e large (60S) ribosomal subuni t, nearly identical to Rpl11Ap ; involved in ribosomal assemb ly; depletion causes degradati on of proteins and RNA of the 60S subunit; has similarity to E. coli L5 and rat L11
WormBase	WBGene00004423	8.997777707990486e-82	locus:rpl-11.2 status:Confir med UniProt:Q19162 protein _id:CCD61193.1
DictyBase	DDB_G0279189	9.998074580622396e-81	rpl11 on chromosome: 3 positio n 1766422 to 1767386
Stentor Coeruleus	SteCoe_23588	1.2160992992528256e-37

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00829380(coding)
ATGACCGACAAAAAGGAAAATAAGATGAGAGAAGTCAAGATCGCCAAGTTGGTTATCAAC
TGTTGCGTTGGTGAATCTGGTGATAAGCTTACCAAGGCTGCTAAGGTCTTGAAGGATTTA
TCCGGACAAGAACCCGTCTTCTCCAGAGCTAGATACACCATCAGATCCTTCGGTATCAAG
AGAAACGAAAAGATGGCTGTTCACGTTACCATCAGAGGTGATAAGGCCAGAGATATCCTT
ACCAGAGGTTTAAAGGTTAAGGAAATGGAACTTAGAAAGAAGAACTTCTCCAACACTGGT
AACTTCGGTTTCGGTATCTAAGAACACATCGATCTCGGTATGAAATATGACCCCTCTACT
GGTATTTTCGGTATGGACTTCTACGTCGTCCTTGAAAGACCCGGTACAAGAGTTGCTAGA
AGAAGAAGAGCTACCTCTAGAGTCGGTAACAACCAAATGATCTCCAAGGAAGAATGTATC
AACTGGTTCAAGACCGAATTCGAAGGCAACGTCTATTGA

>TTHERM_00829380(protein)
MTDKKENKMREVKIAKLVINCCVGESGDKLTKAAKVLKDLSGQEPVFSRARYTIRSFGIK
RNEKMAVHVTIRGDKARDILTRGLKVKEMELRKKNFSNTGNFGFGIQEHIDLGMKYDPST
GIFGMDFYVVLERPGTRVARRRRATSRVGNNQMISKEECINWFKTEFEGNVY

>TTHERM_00829380(gene)
ATGACCGACAAAAAGGAAAATAAGATGAGAGAAGTCAAGATCGCCAAGTTGGTTATCAAC
TGTTGCGTTGGTGAATCTGGTGATAAGCTTACCAAGGCTGCTAAGGTCTTGAAGGATTTA
TCCGGACAAGAACCCGTCTTCTCCAGAGCTAGATACACCATCAGATCCTTCGGTATCAAG
AGAAACGAAAAGATGGCTGTTCACGTTACCATCAGAGGTGATAAGGCCAGAGATATCCTT
ACCAGAGGTTTAAAGGTTAAGGAAATGGAACTTAGAAAGAAGAACTTCTCCAACACTGGT
AATTTGTTAATCTTGTTTTTTTTCTGATAAATGCTTTTTTTCAGCTTCTTTCTTCTTTGT
TCTCCTGCAGCTAATAATCAATTATTCATTGATTCAAAGCATTTTGCTTAAAGCAAGATT
CCTTAAGAAAGCTCTTTTTATTTATTTCAATCTCAATAATTTCAACGGCTTAATTAATAT
TTATTTTTAAAACAGGTAACTTCGGTTTCGGTATCTAAGAACACATCGATCTCGGTATGA
AATATGACCCCTCTACGTAAGCTATTAACACAAACTCAAAAAAACAATCTTTTAAATTCG
TAGCATCTGCAAAGCTCACAAAAATAAATCAAGACAAAAATGCCCTAAAACAAAAAAAAG
CAATATAAAAAAGAAGCATCAAATATACAGCGAGTTTTTAAAGATTAAAAATGCAGTCTT
TAATTAAAAATTCATAATAAAATCAATATGATTTTCACTTAAAGCCTTGAAGATGCTGCA
ATTTAAAAATGAAATTTTCCTATTAAACATTAAAATAATCTTTCCTTTTAATTAATAATA
GTGGTATTTTCGGTATGGACTTCTACGTCGTCCTTGAAAGACCCGGTACAAGAGTTGCTA
GAAGAAGAAGAGCTACCTCTAGAGTCGGTAAGAGATCAATTACTTTTTAAATTGAATAAG
TTTAAATACTTCAATCTTATTTACTTCACATGCACGCCAATCAGCTTTCCTTCAAACTAT
CTATCTATCTATTAATAAATAAATAAACTGCTAAGATTAAAGATAATAAATAAATAAATA
AATAAATAAATAAAAGCTCAAAGAATAATACGAATAGTTAATCTAATAAAGTCAATAAAT
CTCATAGCAATTATTAAATTAAAGGACAAAAAAAAGTTGTTTATTTGAAGGATATGCATA
AAGTTTAGATGATAAAATTAGCTAAAAAACCAATAGAAAGTCTTAAAATTAAGCTCAACT
TGTAATTAAAATCTTTGTTTGCGTTTTCTAGCACTTTTGTGTTAAGAAATAAGGACTTTT
CTTGAAGTGAAATGGAAATTACTAACTCTACTATTATGCAGTCAAAACAATTTAAAATAA
TGCTAATATGAAAAATGAAACTATCCATTCAATATAGCAATTTTCATTAATTTAGTGAAT
CAAACAAAATAATTAATAAAATTAATAAGTGGTTCTTTTCGGATTTAAAAACCAACAAAT
CAATCAATGGTAAATTTATTGTTTTTTGGTTGGTTGGTTTGTTTGTTTGTTATGAGGCTG
ACTTAAAACGAAATTAGATTTAAACCTTTGAAAAATAAAAAGAATGATTGAATTTATATT
GCCTTAACTATTTGGGTTACGAGAATACTTAAGGAATAAATTAATGTGTTAAATAAAGAG
ATAGTTAGATGGATAAACTGTTTTGTAAGCTGTTAGAGAAATTTGGTAGCAGAAATAAGA
ACGATGCTTGCATAGAAATAAATTAGATTGGAATTTTTATACTTACTTTAACCTTTTTTT
GATATAATTAACTAATCAATTAATTAAATTATTAGGTAACAACCAAATGATCTCCAAGGA
AGAATGTATCAACTGGTTCAAGACCGAATTCGAAGGCAACGTCTATTGA