Identifiers and Description

Gene Model Identifier

TTHERM_01053000

Standard Name

RPL10 (Ribosomal protein of the large subunit)

Aliases

PreTt22023 | 213.m00073 | RPL16-E.coli

Description

Ribosomal protein L10.e containing protein; Homolog of yeast RPL10(/RPL16) and E.coli RPL16

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• ribosome (IEA) | GO:0005840
• intracellular (IEA) | GO:0005622

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

• ( PF00826 ) ribosomal L10
• ( PF00252 ) ribosomal protein L16
• ( TIGR01164 ) ribosomal protein L16
• ( TIGR00279 ) ribosomal protein L10.e
• ( PF04028 ) Domain of unknown function (DUF374)

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.2%

TetraMine Data

TTHERM_01053000

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_09424.1	1.0001788721085356e-149	ribosomal protein L10.e contai ning protein (216 aa)
Oxytricha	Contig10707.0.g22	3.0014466598835893e-101	Ribosomal protein L16p/L10e
DictyBase	DDB_G0288273	6.997716170296885e-95	rpl10 on chromosome: 5 positio n 1312496 to 1313528
WormBase	WBGene00004421	1.99970314379378e-94	locus:rpl-10 60S ribosomal p rotein L10 status:Confirmed UniProt:Q09533 protein_id: CAA88308.1
SGD	YLR075W	9.998285701479858e-93	RPL10 Protein component of the large (60S) ribosomal subunit , responsible for joining the 40S and 60S subunits; regulate s translation initiation; has similarity to rat L10 ribosoma l protein and to members of th e QM gene family
Stentor Coeruleus	SteCoe_30582	6.813556821545298e-46

General Information

No Data fetched for General Information

Associated Literature

1. Ref:22052974: Klinge S, Voigts-Hoffmann F, Leibundgut M, Arpagaus S, Ban N (2011) Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6. Science (New York, N.Y.) 334(6058):941-8

Sequences

>TTHERM_01053000(coding)
ATGGGTAGAAGACCTGCTAGATGCTACAGATAACCTAAGGGTAAGCCTTATCCCAAGTCC
AGATACAACAGAGGTGTCCCCGATGCCAGAATCAGAATCTACGACTCTGGTAGAAAGAAA
GCCACCGTTGAAGAATTCCCTTACGTTGTTCACATCGTTTCTGATGAAAAGGAATAAATC
ACCTCTGAAGCCTTGGAAGCTGCCCGTATTGCTGCTAACAAAAATTTGATTAAATTCATC
TCTAAGGATGCTTTCCATTTAAGATGCAGAGTCCACCCCTGGCACGTACTCAGAATTAAC
AAGATGTTGTCTTGTGCTGGTGCTGATAGACTCCAATCTGGTATGAGAGGTGCTTTCGGT
AAGGCTTTGGGTAAGGCTGCTCGTGTTGATATTGGCTCTATTCTTTTCTCCGTCAGAGTC
AAGGAACCTCACGTTAAGTATGCCATCGACGCTCTTACTAGAGCTAAGGCTAAATTCCCT
GGTAGACAAAAAGTCGTCACCTCCCAAAAGTGGGGTTTCACCAAGCTTACCAGAGCTTAA
TACTCCAGACTTAGAAACCAAAAGAAGCTCGTTACTGATGGTTCCAATGTTAAAGTTATT
GGTGAAAGAGGTCCCCTCTCCAGACTTGAACTCTTCAGAAAGATCTGA

>TTHERM_01053000(protein)
MGRRPARCYRQPKGKPYPKSRYNRGVPDARIRIYDSGRKKATVEEFPYVVHIVSDEKEQI
TSEALEAARIAANKNLIKFISKDAFHLRCRVHPWHVLRINKMLSCAGADRLQSGMRGAFG
KALGKAARVDIGSILFSVRVKEPHVKYAIDALTRAKAKFPGRQKVVTSQKWGFTKLTRAQ
YSRLRNQKKLVTDGSNVKVIGERGPLSRLELFRKI

>TTHERM_01053000(gene)
ATGGGTAGAAGACCTGCTAGATGCTACAGATAACCTAAGGGTAAGCCTTATCCCAAGTCC
AGATACAACAGAGGTGTCCCCGATGCCAGAATCAGAATCTACGACTCTGGTAGAAAGAAA
GCCACCGTTGAAGAATTCCCTTACGTTGTTCACATCGTTTCTGATGAAAAGGAATAAATC
ACCTCTGAAGCCTTGGAAGCTGCCCGTATTGCTGCTAACAAAAATTTGATTAAATTCATC
TCTAAGGATGCTTTCCATTTAAGATGCAGAGTCCACCCCTGGCACGTACTCAGAATTAAC
AAGATGTTGTCTTGTGCTGGTGCTGATAGACTCCAATCTGGTATGAGAGGTGCTTTCGGT
AAGGCTTTGGGTAAGGCTGCTCGTGTTGATATTGGCTCTATTCTTTTCTCCGTCAGAGTC
AAGGAACCTCACGTTAAGTATGCCATCGACGCTCTTACTAGAGCTAAGGCTAAATTCCCT
GGTAGACAAAAAGTCGTCACCTCCCAAAAGTGGGGTTTCACCAAGCTTACCAGAGCTTAA
TACTCCAGACTTAGAAACCAAAAGAAGCTCGTTACTGATGGTTCCAATGTTAAAGTTATT
GGTGAAAGAGGTCCCCTCTCCAGACTTGAACTCTTCAGAAAGATCTGA