Identifiers and Description
Gene Model Identifier
TTHERM_00579280Standard Name
RPC25 (DNA-dependent RNA polymerase III subunit Rpc25 )Aliases
PreTt05821 | 78.m00193 | 3733.m00088Description
RPC25 RNA polymerase Rpb7 amine-terminal domain protein; DNA-dependent RNA polymerase III subunitGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Molecular Function
- DNA-directed 5'-3' RNA polymerase activity (IEA) | GO:0003899
Biological Process
- transcription (IEA) | GO:0006350
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 9.9%
TetraMine Data
TTHERM_00579280
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_16339.1 1.9992982665753866e-121 RNA polymerase Rpb7 domain-con
taining protein (217 aa)
SGD YKL144C 0.00000000002000577768187062 RPC25 RNA polymerase III subun
it C25, required for transcrip
tion initiation; forms a heter
odimer with Rpc17p; paralog of
Rpb7p
WormBase WBGene00014111 0.00000000007999955850159168 locus:rpc-25 status:Partiall
y_confirmed UniProt:Q23645
protein_id:CAA94858.1
DictyBase DDB_G0273425 0.000000009996807949091551 rpc25-1 on chromosome: 2 posit
ion 2980579 to 2981451
Oxytricha Contig21831.0.g92 0.000000009996807949091551 SHS2 domain found in N terminu
s of Rpb7p/Rpc25p/MJ0397
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00579280(coding)
ATGTTTATTTTATGCACTAAAAGAGAAAAGATCAGACTTAAACCTGACAGTCTTGGAAAG
GATTACCAAAAAAACATTACAAAATTATTATATGAAACATATTTATTCAAGGCAATTAAT
GAAAATGAGGTTATTGTAGCTATTAAAGATGTTACTCTGTATGATGGATTTGTAGAATAA
GTAACAGGAGAAGTCGTTTTCGAAATCTAAATGACTTATCTCGTCCAGTAAATAGTTTAA
AATGAAGTCTATGAAGGAACAATCGTTTCATAAAATGCTAAAGGAATTACTGTTAAATTT
GGATAGCTCTAGGCTTTTATTGGTAAACATCTACTTCAGCCAAACTCTACATTTTTCAAG
GATAAAAACGAATGGATTTGGTAGAATGATGAAGAAGACAGCTCTAGCGTGCTCTTCTAT
GAAGCAGATGCTTAGGTTAAATTCAAAATATTTGCCATTAATTTCTTGGCGAAGATTGAC
GAAGTTAACCCAGAAGGATAAAAGCAAATCATAGGTGCGATGAATGAAGATGGCCTTGGT
TTGATATAATGGTGGGATTTCTGA>TTHERM_00579280(protein)
MFILCTKREKIRLKPDSLGKDYQKNITKLLYETYLFKAINENEVIVAIKDVTLYDGFVEQ
VTGEVVFEIQMTYLVQQIVQNEVYEGTIVSQNAKGITVKFGQLQAFIGKHLLQPNSTFFK
DKNEWIWQNDEEDSSSVLFYEADAQVKFKIFAINFLAKIDEVNPEGQKQIIGAMNEDGLG
LIQWWDF>TTHERM_00579280(gene)
ATGTTTATTTTATGCACTAAAAGAGAAAAGATCAGACTTAAACCTGACAGTCTTGGAAAG
GATTACCAAAAAAACATTACAAAATTATTATATGAAACATATTTATTCAAGGTGCGAACT
ATTTACTAAATTAACCAATCAATCATTAATTGCTTGAATTTAATGAATTTTTTATTTACT
AATACACTTCATATTTATTAATACAAAATATTATTCAAAAGGCAATTAATGAAAATGAGG
TTATTGTAGCTATTAAAGATGTTACTCTGTATGATGGATTTGTAGAATAAGTAACAGGAG
AAGTCGTTTTCGAAGTAAGTTGCGCAATTAAATTTATAGATTATAATAAATTTATTATTG
TTCAAAACTAGATCTAAATGACTTATCTCGTCCAGTAAATAGTTTAAAATGAAGTCTATG
AAGGAACAATCGTTTCATAAAATGCTAAAGGAATTACTGGTAAAATTAAAATTATTCTTT
TTTTGAAAAAATAAAAAAAACCTTAATCTACTTAATGTTTTTAATTCTCAATCAATAATT
AAATATTTCTCATTTAAATTTAATTAATTAAGTTAAATTTGGATAGCTCTAGGCTTTTAT
TGGTAAACATCTACTTCAGCCAAACTCTACATTGTATCTTTTTTCTTATATTTAATATAT
ATATTTACATTTATTTATTAATCATTACGAAATATCTTTTAATTTTTTAATTCATTTGAT
TAACTCTTCTAATAACAGCAAACTTATTTTAAAATACTTGTTTAGATAATTCAAAACGTA
TTTTTAATAGTTTTTATTTAAATTTCATACATAAAATAGTTTCAAGGATAAAAACGAATG
GATTTGGTAGAATGATGAAGAAGACAGCTCTAGCGTGCTCTTCTATGAAGCAGATGCTTA
GGTTAAATTCAAAATATTTGCCATTAATTTCTGTAATTTTAATTAATTTAAACAATTTTC
GTTTTGTATTAATAATTTTCTTTAAACAACAAAAGTGGCGAAGATTGACGAAGTTAACCC
AGAAGGATAAAAGCAAATCATAGTATTTTATTATTTTGAACATAAATTGCTTAATAAAGT
TCATGTGTAAATTTTATCTCTAAAATTCATAAAAAATAGGGTGCGATGAATGAAGATGGC
CTTGGTTTGATATAATGGTGGGATTTCTGA