Identifiers and Description

Gene Model Identifier

TTHERM_00011760

Standard Name

RPC19 (RNA polymerases I and III common subunit Rpc19 )

Aliases

PreTt11782 | 1.m00830

Description

RPC19 DNA-directed RNA polymerase I and III 14 kDa protein; RNA polymerases I and III common subunit

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Molecular Function

• DNA-directed 5'-3' RNA polymerase activity (IEA) | GO:0003899
• protein dimerization activity (IEA) | GO:0046983

Biological Process

• transcription (IEA) | GO:0006350

Domains

• ( TIGR01563 ) phage head-tail adaptor, putative
• ( PF01193 ) RNA polymerase Rpb3/Rpb11 dimerisation domain

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 11.2%

TetraMine Data

TTHERM_00011760

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_02771.1	6.001309080488961e-82	DNA-directed RNA polymerase I subunit D (150 aa)
SGD	YNL113W	1.9993007828132465e-27	RPC19 RNA polymerase subunit A C19, common to RNA polymerases I and III
Oxytricha	Contig22515.0.g14	3.99801309251602e-27	RNA polymerase Rpb3/Rpb11 dime risation domain
DictyBase	DDB_G0291362	3.999970367130025e-21	rpc19 on chromosome: 6 positio n 182518 to 183059
WormBase	WBGene00010230	7.000255027549774e-17	locus:rpac-19 Probable DNA-d irected RNA polymerases I and III subunit RPAC2 status:Con firmed UniProt:P34476 prot ein_id:CAA80165.1
Stentor Coeruleus	SteCoe_21654	0.00000000027894680928689246

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00011760(coding)
ATGTCAGATAGCGAAGAAAATTCATTCCAAGAAATTGAATAGGAAGATGACGAAGCTGTC
AACAATCCTGATATTGAAGAGGAAGAAGAAGATGAAGATTATATGATGGAAGATAAGCCT
AAAAAGCAATCTGCAGAAGAAAAGCTTGTTATTGACTAAAATGAAAAAGATAGAACTTGC
GCTACTTATACTTTCTATGATGAAGACCACACCCTTGGAAATACAGTTAGATATATGCTT
GTAAAGAGAAAAGATGTAGAATTCTGTGGTTATACAATTCCTCACCCTTCTGAAAATAAA
ATGAATTTACGTTTATAAACAATAAAAAAAAATTCAAATGAAGTATTAAAAGAAGGATTA
GATAGTTTGGCTGGACTTTGTGATGTACTTAATGACAAATTTGATGCTGCTATGAAAAAA
TTTGAAAAACAATAAAAAAAGAAATCAAAATGA

>TTHERM_00011760(protein)
MSDSEENSFQEIEQEDDEAVNNPDIEEEEEDEDYMMEDKPKKQSAEEKLVIDQNEKDRTC
ATYTFYDEDHTLGNTVRYMLVKRKDVEFCGYTIPHPSENKMNLRLQTIKKNSNEVLKEGL
DSLAGLCDVLNDKFDAAMKKFEKQQKKKSK

>TTHERM_00011760(gene)
ATGTCAGATAGCGAAGAAAATTCATTCCAAGAAATTGAATAGGAAGATGACGAAGCTGTC
AACAATCCTGATATTGAAGAGGAAGAAGAAGATGAAGATTATATGATGGAAGATAAGCCT
AAAAAGCAATCTGCAGAAGAAAAGCTTGTTATTGACTAAGTAATAAATTATCAAAGATTA
ATTGATTGATTAAATTAGGAATAGAAATGAAAACATAAAAAATTGAGTTAGTTTTTAAGA
CTAAAGCATAGAATTTACGATAATTACAAAATAAATGTTTTTAATAAGCAAGCTGAACAT
TTTTTTATAAAATTAGAATGAAAAAGATAGAACTTGCGCTACTTATACTTTCTATGATGA
AGACCACACCCTTGGAAATACAGTTAGATATATGCTTGTAAAGAGAAAAGATGTAGAATT
CTGTGGTTATACAATTCCTCACCCTTCTGAAAATAAAATGAATTTACGTTTATAAACAAT
AAGTAATTTGGTTTATTAGTTTGTGCTTAGTTTTATAAAATAATACATTTTTTTCATAAA
ATAATAGAAAAAAATTCAAATGAAGTATTAAAAGAAGGATTAGATAGTTTGGCTGGACTT
TGTGATGTACTTAATGACAAATTTGATGCTGCTATGAAAAAATTTGAAAAACAATAAAAA
AAGAAATCAAAATGA