Identifiers and Description

Gene Model Identifier

TTHERM_00549610

Standard Name

RPB81 (RNA polymerase II subunit 8A)

Aliases

PreTt15102 | 71.m00229 | 3729.m00105 | RPB8A

Description

Subunit shared in RNA polymerases I, II & III

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF03870 ) RNA polymerase Rpb8

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 9.7%

TetraMine Data

TTHERM_00549610

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_17079.1	4.0007753645635287e-88	RNA polymerase Rpb8 family pro tein (145 aa)
DictyBase	DDB_G0278039	6.001696815660978e-24	rpb8 on chromosome: 3 position 186227 to 187053
Oxytricha	Contig19419.0.g46	3.999970367130025e-21	RNA polymerase Rpb8
WormBase	WBGene00017830	0.000000000000001999258566166494	locus:rpb-8 Probable DNA-dir ected RNA polymerases I, II, a nd III subunit RPABC3 status :Confirmed UniProt:Q19826 protein_id:CCD65759.1
SGD	YOR224C	0.000000000003998907168546896	RPB8 RNA polymerase subunit AB C14.5, common to RNA polymeras es I, II, and III

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00549610(coding)
ATGAGTAAAAGTGATATCTTGCTTGAAGATCGTTTCAAATTAGAAGAAATCAAGAAAGAA
GAAAAGTTTTCTAAAGTAGAAAGAGTAGTTTTAGTCAGCGATAATAACATTAAGATTGAA
ATCGATATTCATACTGATCTCTACTCAATGAAGAAGGGAAATCAATATTGGGTTATGATC
ACCTCCTCTTTAGGTAACTTCTAAGAAGACAAAGGTATTTTTGTCTCAGAAGAATTCGAC
AGAGAAAGCATCAAGGATAAGTTCGAATACGTTATGCATGGCAAAATATACAATATGAAT
TCTGACAACAAAGCTAAGACTGTGTCTATTTTTGCTAGTTTTGGTGGTTTGCTTATGAAG
GTCAGTGGTAAAGATGAAGATCTTAAAAACTTCAACGTTGATTCTAGAATTTATATTTTG
ATAAGACTTTCTTGA

>TTHERM_00549610(protein)
MSKSDILLEDRFKLEEIKKEEKFSKVERVVLVSDNNIKIEIDIHTDLYSMKKGNQYWVMI
TSSLGNFQEDKGIFVSEEFDRESIKDKFEYVMHGKIYNMNSDNKAKTVSIFASFGGLLMK
VSGKDEDLKNFNVDSRIYILIRLS

>TTHERM_00549610(gene)
ATGAGTAAAAGTGATATCTTGCTTGAAGATCGTTTCAAATTAGAAGAAATCAAGAAAGAA
GAAAAGTTTTCTAAAGTAGAAAGAGTAGTTTTAGTCAGCGATAATAACATTAAGATTGAA
ATCGATATTCATACTGATCTCTACTCAATGAAGAAGGGAAATCAATATTGGGTTATGATC
ACCTCCTCTTTAGGTAACTTCTAAGAAGACAAAGGTATTTTTGTCTCAGAAGAATTCGAC
AGAGAAAGCATCAAGGATAAGTTCGAATACGTTATGCATGGCAAAATATACAATATGAAT
TCTGACAACAAAGCTAAGACTGTGTCTATTTTTGCTAGTTTTGGTGGTTTGCTTATGAAG
GTCAGTGGTAAAGATGAAGATCTTAAAAACTTCAACGTTGATTCTAGAATTTATATTTTG
ATAAGACTTTCTTGA