Identifiers and Description
Gene Model Identifier
TTHERM_00446180Standard Name
RPB7 (RNA polymerase II subunit 7)Aliases
PreTt03885 | 51.m00251 | 3704.m00106Description
RNA polymerase Rpb7, N-terminal domain containing proteinGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Molecular Function
- DNA-directed 5'-3' RNA polymerase activity (IEA) | GO:0003899
Biological Process
- transcription (IEA) | GO:0006350
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 14%
TetraMine Data
TTHERM_00446180
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_10832.1 6.996525358388811e-93 RNA polymerase Rpb7 domain-con
taining protein (174 aa)
DictyBase DDB_G0284891 0.0000000000599805963605737 rpb7 on chromosome: 4 position
2602996 to 2604032
SGD YDR404C 0.0000000029989608248573072 RPB7 RNA polymerase II subunit
B16; forms two subunit dissoc
iable complex with Rpb4p; invo
lved in recruitment of 3-end p
rocessing factors to transcrib
ing RNA polymerase II complex
and in export of mRNA to cytop
lasm under stress conditions;
also involved in translation i
nitiation
WormBase WBGene00021845 0.000000007002490258088747 locus:rpb-7 status:Partially
_confirmed UniProt:Q9N3C9
protein_id:CCD72992.1
Oxytricha Contig21831.0.g92 0.0007999190683310628 SHS2 domain found in N terminu
s of Rpb7p/Rpc25p/MJ0397
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00446180(coding)
ATGTTTTATCATACATCTGGTTTAAGAACTATTTTGTAGATTCACCCTACTCATATGGGT
ATGCTTATTGGAAATGATAAAGTCAACCTTAATAATAATGATTTGCTTAAAAAAGAATTA
ATTGAAAAAGTAGAAGGTAAAAAAAGTAATGAACATGGATATATTATTTTGGTAGTAAAT
TTAAGATATATGAGCAAACCATTAATTGATTATGATGGCTTTATTAAAGTTGAGATATAG
TTTGATGCATTAACATTTAAACCATAACTTAAAGAATATATTGATATCTAAATAACTGAA
ATCAAGCAAAATCACATTGCTGGTTCTGTTGGCCCTATGAACATATTTTATGTCCCCAAT
CGTAAGCTTCCTTAACAACTTTAAAACGAATTAAAAGATGGTAAACTTGAATCTGATGAT
TTAACCTTATACGAAGGTGATAAATTGAGAGTTTTGATAGAAACTATTAACAATGATAAA
ATCCTTTGTAAAGTAGATGATGATTTTAATAGTTATTAATGA>TTHERM_00446180(protein)
MFYHTSGLRTILQIHPTHMGMLIGNDKVNLNNNDLLKKELIEKVEGKKSNEHGYIILVVN
LRYMSKPLIDYDGFIKVEIQFDALTFKPQLKEYIDIQITEIKQNHIAGSVGPMNIFYVPN
RKLPQQLQNELKDGKLESDDLTLYEGDKLRVLIETINNDKILCKVDDDFNSYQ>TTHERM_00446180(gene)
ATGTTTTATCATACATCTGGTTTAAGAACTATTTTGTAGATTCACCCTACTCATATGGGT
ATGCTTATTGGAAATGATAAAGTCAACCTTAATAATAATGATTTGCTTAAAAAAGAATTA
ATTGAAAAAGTAGAAGGTAAAAAAAGTAATGAACATGGATATATTATTTTGGTAGTAAAT
TTAAGATATATGAGCAAACCATTAATTGATTATGATGGCTTTATTAAAGTTGAGATATAG
TTTGATGCATTAACATTTAAACCATAACTTAAAGAATATATTGATATCTAAATAACTGAA
ATCAAGCAAAATCACATTGCTGGTTCTGTTGGCCCTATGAACATATTTTATGTCCCCAAT
CGTAAGCTTCCTTAACAACTTTAAAAGTAATAATTTTATTTTTAATTAATTATGTTAAAT
ATTAAAAATTGGAATAGTGTATTTGTTTTTTTATATAGATCATGTTTATTAAAGATTATT
AACTTATAAATTAGCGAATTAAAAGATGGTAAACTTGAATCTGATGATTTAACCTTATAC
GAAGGTGATAAATTGAGAGTTTTGATAGAAACTATTAACAATGATAAAATCCTTTGTAAA
GTAGATGATGATTTTAATAGTTATTAATGA