Identifiers and Description
Gene Model Identifier
TTHERM_00421170Standard Name
RPB6 (RNA polymerase II subunit 6)Aliases
PreTt07241 | 46.m00296 | 3679.m00146Description
RPB6 DNA-directed RNA polymerase subunit K; Subunit shared in RNA polymerases I- II & IIIGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Molecular Function
- DNA-directed 5'-3' RNA polymerase activity (IEA) | GO:0003899
- DNA binding (IEA) | GO:0003677
Biological Process
- transcription, DNA-templated (IEA) | GO:0006351
Domains
- ( PF01192 ) RNA polymerases K / 14
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.4%
TetraMine Data
TTHERM_00421170
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_10954.1 2.9996910481190226e-100 RNA polymerase K/14 to 18 kDa
subunit protein (164 aa)
Oxytricha Contig8949.0.g106 9.997975313387782e-28 RNA polymerase Rpb6
SGD YPR187W 2.000130478826482e-26 RPO26 RNA polymerase subunit A
BC23, common to RNA polymerase
s I, II, and III; part of cent
ral core; similar to bacterial
omega subunit
WormBase WBGene00007355 9.996273942859018e-26 locus:rpb-6 Probable DNA-dir
ected RNA polymerases I, II, a
nd III subunit RPABC2 status
:Confirmed UniProt:Q17684
protein_id:CAA90053.1
DictyBase DDB_G0291037 3.001290106883431e-24 rpb6 on chromosome: 5 position
4838044 to 4838564
Stentor Coeruleus SteCoe_17283 0.00000000000003442477108469977
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00421170(coding)
ATGAGCGACTACGGTGATAACGATTACTCTGATCCTGGTAATTTTGATGAGGATAATATG
GGAGATGACATGGATGATGGAGATCAAGAATCTGAAGAAGCCTCTTCCAGATCCGGAGAT
GAGGGTGATTCAGCTGATGATTCTGATCACTCTGGAACTGAATCTGAAAGTTAATCTGAA
GTCGATAAGGACGAATATCCTGAAGAAATGGTTATCATAAAAGATTAAGATAGAGATTAA
TAAGCAAGTAAAACCAAAGTAACACCTCCTTTCCTCACAAAATATGAAAAAGCCAGAATT
ATTGGAACACGCGCCTTATAAATTGCTCAAAACTCTCCAATCTATGTAGAAACAGATGAC
AAGGACTATGATCCTATTGCTATTGCCGAAAAAGAGTTTGTCTAGAAAAAGATCCCCTTT
ATTATTAGAAGATATCTTCCCAATAAAGAATATGAAGATTGGGCTCTCGATGAATTAGAA
GTCTTAGATTGA>TTHERM_00421170(protein)
MSDYGDNDYSDPGNFDEDNMGDDMDDGDQESEEASSRSGDEGDSADDSDHSGTESESQSE
VDKDEYPEEMVIIKDQDRDQQASKTKVTPPFLTKYEKARIIGTRALQIAQNSPIYVETDD
KDYDPIAIAEKEFVQKKIPFIIRRYLPNKEYEDWALDELEVLD>TTHERM_00421170(gene)
ATGAGCGACTACGGTGATAACGATTACTCTGATCCTGGTAATTTTGATGAGGATAATATG
GGAGATGACATGGATGATGGAGATCAAGAATCTGAAGAAGCCTCTTCCAGATCCGGAGAT
GAGGGTGATTCAGCTGATGATTCTGATCACTCTGGAACTGAATCTGAAAGTTAATCTGAA
GTCGATAAGGACGAATATCCTGAAGAAATGGTTATCATAAAAGATTAAGATAGAGATTAA
TAAGCAAGTAAAACCAAAGTAACACCTCCTTTCCTCACAAAATATGAAAAAGCCAGAATT
ATTGGAACACGCGCCTTATAAATTGCTCAAAACTCTCCAATCTATGTAGAAACAGATGAC
AGTAATATAAAAATTATTTTTTTTTAAGCTTGACAGAAATAGATTACCGAAATTAGAAAA
CAAGAATATTTAGAATACCAAACTGCAATTTAATGAAAATAGCTAAGTATTTTCCTTATT
TCGATAGCATAAATAACAATTTAAGTATTTATTTGCAAGAGATAGCAAAATAATTTAAAT
TTATGGAACAAATATGAAAATGATGAAAATAAATAATAAAAAAAAACAAAATTTTTTAAA
AGGAATGAACAAAGATAGTTTTATTTCAAGCAAAAATTTGATTTTAATTTGAATATAAAT
AAAATAATTTATTTATTTTAAATAAAACAGAGGACTATGATCCTATTGCTATTGCCGAAA
AAGAGTTTGTCTAGAAAAAGATCCCCTTTATTATTAGAAGATATCTTCCCAATAAAGAAT
ATGAAGATTGGGCTCTCGATGAATTAGAAGTCTTAGATTGA