Identifiers and Description

Gene Model Identifier

TTHERM_00522180

Standard Name

RPB10 (RNA polymerase II subunit 10)

Aliases

PreTt12333 | 65.m00151 | 3717.m00030

Description

Subunit shared in RNA polymerases I, II & III

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Molecular Function

• DNA binding (IEA) | GO:0003677
• DNA-directed 5'-3' RNA polymerase activity (IEA) | GO:0003899

Biological Process

• transcription, DNA-templated (IEA) | GO:0006351

Domains

• ( PF00098 ) Zinc knuckle
• ( PF01194 ) RNA polymerases N / 8

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 14.2%

TetraMine Data

TTHERM_00522180

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_12890.1	3.9991604984848653e-48	RNA polymerase N/8 kDa subunit protein (74 aa)
Oxytricha	Contig4686.0.g38	2.0009605191578312e-25	RNA polymerases N / 8 kDa subu nit
SGD	YOR210W	9.002093297142233e-23	RPB10 RNA polymerase subunit A BC10-beta, common to RNA polym erases I, II, and III
DictyBase	DDB_G0272036	1.0002869940498747e-21	rpb10 on chromosome: 2 positio n 1094076 to 1094714
WormBase	WBGene00021347	7.002638123733849e-21	locus:rpb-10 DNA-directed RN A polymerases I, II, and III s ubunit RPABC5 status:Confirm ed UniProt:Q9GR61 protein_ id:CCD73423.1

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00522180(coding)
ATGATTATCCCAGTTAGATGCTTTACTTGTGGCAAAGTTGTTGGCCATATGTGGAATGAC
TTCTTATAAATGATCAGCGAATCTAACCCTAATAAAAAGGATATGAAGAGTGCTTTAGAT
GAATTAAGATTAAATAGATATTGCTGCAGAAGAATGATTCTCACTCACTGTGATTTAATT
GATAAGTTACTTAACTACAACATTTACAAGGGTCAAAGTTGA

>TTHERM_00522180(protein)
MIIPVRCFTCGKVVGHMWNDFLQMISESNPNKKDMKSALDELRLNRYCCRRMILTHCDLI
DKLLNYNIYKGQS

>TTHERM_00522180(gene)
ATGATTATCCCAGTTAGATGCTTTACTTGTGGCAAAGTAAATAATTAGCTTGTATTTCAT
GAACTAGAATAGTGATTTTGAATCTATCTTCAATATGATGATGAAATTTTTTAAAGCCAA
ATGCATCTTTTTCTACTAAAATGCTAAATTATTATATTATTTTATAATAGGTTGTTGGCC
ATATGTGGAATGACTTCTTATAAATGATCAGCGAATCTAACCCTAATAAAAAGGATATGA
AGTAAAAATAAATAAATTATCGATTGAAAAGCTCAATTTAATCTAAAATTGTTTTTATAA
AATGCAATTAGGAGTGCTTTAGATGAATTAAGATTAAATAGATATTGCTGCAGAAGAATG
ATTCTCACTCACTGTGATTTAATTGATAAGTTACTTAACTACAACAGTAAAATGAATTAA
ATAAAATCTACTATCTATTAAAATTATTTTATTTTAACAAAGTTTACAAGGGTCAAAGTT
GA