Identifiers and Description

Gene Model Identifier

TTHERM_00142290

Standard Name

RNH2 (RNase H2)

Aliases

PreTt26635 | 11.m00332 | 3702.m00056

Description

RNH2 ribonuclease HII protein; ribonuclease HII family protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Molecular Function

• RNA binding (IEA) | GO:0003723
• RNA-DNA hybrid ribonuclease activity (IEA) | GO:0004523

Domains

• ( PF01351 ) ribonuclease HII
• ( TIGR00729 ) ribonuclease HII

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.4%

TetraMine Data

TTHERM_00142290

WebApollo

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Tetrahymena Stock Center

• ( SD02831 ) Macronucleus: neo3 KO of RNH2

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_04848.1	9.003703520551527e-172	ribonuclease HII family protei n (285 aa)
DictyBase	DDB_G0292584	6.9991332754409754e-68	rnaseh2A on chromosome: 6 posi tion 1802425 to 1803401
Oxytricha	Contig14329.0.g31	3.0000115468388957e-66	Ribonuclease HII
WormBase	WBGene00004383	9.996907204735647e-62	locus:rnh-2 Ribonuclease H2 subunit A status:Confirmed UniProt:Q9U6P6 protein_id:C AC70103.1
SGD	YNL072W	2.0006622580855403e-35	RNH201 Ribonuclease H2 catalyt ic subunit, removes RNA primer s during Okazaki fragment synt hesis and errant ribonucleotid es misincorporated during DNA replication; homolog of RNAse HI; related to human AGS4 whic h causes Aicardi-Goutieres syn drome
Stentor Coeruleus	SteCoe_28482	9.602680054508676e-24

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00142290(coding)
ATGGCAACATTTGAGAATAAAAAGAAAAATTTAGATTGGGTCATGGGTATAGATGAAGCA
GGAAGAGGACCTGTATTGGGACCTATGGTATATGGCTGTTGCGTTTGGCCAATTTAATAT
GAGCCTGAATTAAAATTAGAAGGCTTTAATGATTCAAAATAACTCACAGAATAGAAAAGA
GACTAGCTTTATGCACGTATGGAAGAATTAAAAAACGACAAGCTATATTTTGAAGTAAGA
ATTTTATCAGCAGAATTCTTATCTAACAGAATGTTAGCGAAAAATAGAGATTCTTTAAAT
GAGTTATCATTTAATGCTGCATATAGCTTGATAGATTCAGTAATGAGTTAAGGTTTTAAT
GTGACTTAAGTATTTTTAGACACAGTAGGTAAAGAAGAAACATATCAAGCAAAGCTCTAC
CAAGATTATAAATATACTTATCCATAACTTAAATTTACAGTATCTTCAAAAGCAGATGCT
AAATTTCCAGTTGTTGGAGCAGCATCAATTTGTGCTAAAGTTACAAGAGATCTTTAAATA
ACAAATAATGATATGAGAGAGCCTTTGGATCTATCTAAAGCTACAGGAAGCGGGTATCCA
TCTGATCCAAACACTAAAAAGTGGCTGTAAGAGGTATTTGACCCTGTATTTGGATTTCCA
TCTAATGTTAGATACTCGTGGTCAACAGTAGATAATATTTTTAATGAAAAAAAATTGTAA
GTAAACTTTTTTGATGAAAGTGATAAGAAAGATAAAAATTAAAAAAGCCTTACTTAAATG
GTAAGTTAAAAAAAATCTGAGACTAATGGATATTACTCAAAAAAAATAGGAATAACTAGA
AATTTTGATTTATGA

>TTHERM_00142290(protein)
MATFENKKKNLDWVMGIDEAGRGPVLGPMVYGCCVWPIQYEPELKLEGFNDSKQLTEQKR
DQLYARMEELKNDKLYFEVRILSAEFLSNRMLAKNRDSLNELSFNAAYSLIDSVMSQGFN
VTQVFLDTVGKEETYQAKLYQDYKYTYPQLKFTVSSKADAKFPVVGAASICAKVTRDLQI
TNNDMREPLDLSKATGSGYPSDPNTKKWLQEVFDPVFGFPSNVRYSWSTVDNIFNEKKLQ
VNFFDESDKKDKNQKSLTQMVSQKKSETNGYYSKKIGITRNFDL

>TTHERM_00142290(gene)
ATGGCAACATTTGAGAATAAAAAGAAAAATTTAGATTGGGTCATGGGTATAGATGAAGCA
GGAAGAGGACCTGTATTGGGACCTATGGTATATGGCTGTTGCGTTTGGCCAATTTAATAT
GAGCCTGAATTAAAATTAGAAGGCTTTAATGATTCAAAATAACTCACAGAATAGAAAAGA
GACTAGCTTTATGCACGTATGGAAGAATTAAAAAACGACAAGCTATATTTTGAAGTAAGA
ATTTTATCAGCAGAATTCTTATCTAACAGAATGTTAGCGAAAAATAGAGATTCTTTAAAT
GAGTTATCATTTAATGCTGCATATAGCTTGATAGATTCAGTAATGAGTTAAGGTTTTAAT
GTGACTTAAGTATTTTTAGACACAGTAGGTAAAGAAGAAACATATCAAGCAAAGCTCTAC
CAAGATTATAAATATACTTATCCATAACTTAAATTTACAGTATCTTCAAAAGCAGATGCT
AAATTTCCAGTTGTTGGAGCAGCATCAATTTGTGCTAAAGTTACAAGAGATCTTTAAATA
ACAAATAATGATATGAGAGAGCCTTTGGATCTATCTAAAGCTACAGGAAGCGGGTATCCA
TCTGATCCAAACACTAAAAAGTGGCTGTAAGAGGTATTTGACCCTGTATTTGGATTTCCA
TCTAATGTTAGATACTCGTGGTCAACAGTAGATAATATTTTTAATGAAAAAAAATTGTAA
GTAAACTTTTTTGATGAAAGTGATAAGAAAGATAAAAATTAAAAAAGCCTTACTTAAATG
GTAAGTTAAAAAAAATCTGAGACTAATGGATATTACTCAAAAAAAATAGGAATAACTAGA
AATTTTGATTTATGA