Identifiers and Description
Gene Model Identifier
TTHERM_00283900Standard Name
RNH13 (RNase H1.3)Aliases
PreTt04929 | 25.m00393 | 3694.m00176Description
RNH13 RNase H family protein; RNase H family protein; localizes to micronucleus during conjugationGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Molecular Function
- RNA-DNA hybrid ribonuclease activity (IEA) | GO:0004523
- nucleic acid binding (IEA) | GO:0003676
Domains
- ( PF00075 ) ribonuclease HI
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.1%
TetraMine Data
TTHERM_00283900
WebApollo
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Tetrahymena Stock Center
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_09026.1 9.997093137033517e-262 hypothetical protein (695 aa)
General Information
Paragraph No Gene Name Paragraph Text 117 RNH13 HA-tagged RNase H1.3 localizes to early meiotic micronuclei. RNH13 gene knockout causes aberrant numbers of nuclei in exconjugants.
Associated Literature
Sequences
>TTHERM_00283900(coding)
ATGTGCTATAAGTGCCTTCCTGATCATAGTCTCCATTCTGAATAGATTGTTTAGCTTGAT
AACTTAAGTGATAAAAAAAACTTGGATTGCCAAGAGAATATCAATAGCTCTATAGACAGC
AACAAAAATAATAAGCAGGGAGTCAGTCCACTTAAGGTAAATAGCGAATTCAATGGATCT
CCTTTTATGTTAAATAATCTAGCTAACTTAAAAATAAACTCCAGCTCATAGGAGCCTTCA
GATTAAAACGTAAAAAGAAGTAGTGTTAAAAATAGTTTTAGCAAAGTAAAAGAATTCAAT
TCAACATCTAACATAGAAGAAGAAATACTTGACTAGGGTCAAATCAAGCAAAAAAAGAAA
AAATCTAGCATTTCTCTTGATAAGCCAGAAAAATAAATACAACTTAACAATAATACACAA
AGTAGAAAATAAGAATTTAGAGATGTGTTTGTAATTAAAGAAGAAAATATGGATGATGAT
TATACAAACTGTAAAATTGAGAATGGTGGTAATTCTCATTTGAAAAACACTAATGCTTTA
CCTCAAAATGGAAAGAAATATTCTAAAGAGTCTGCTCAAACTAAAGTTTTTGGGACAGAT
ATGTTGTCACAAATTTCCAGACAAAAAGGTAGTAGTTCCTAAAAAAACATAAATCAGTTA
CTAAGTTAAGCTTCCACAGTATCTCCAAGCATCTAACCTGTTGAGAAGAGTATGATGGAT
GTGATTTCTAATACAACTAATTATTATCCATAATATCCCTTCTATCCTCCTCATAATCCT
TATGAAAATCCTTTCTAATTTAGCACTAATTTTAATCCAGGCCACTAAATGACTTATCCT
CATCCACATCCTTAAGGGTACCCACCAAATTAGGTAAATGCGCCTTTTTCTCACCTCTAT
AACCAGTAACATAATTTTAACAATATGCCTCCTTACTATCCTCCTACTCGTTCTTCTTAT
ATGCCAAGCTTTAACCATAATTATTAGTAGAACCACATGCTTTAAGAGTAAGAAACTAAA
GAATAATATCATACTATATCTGATTCCAGTTCTAGTGATAAATATTTTTCAAAAAAAGAT
AAATTAAGTAATGAAAGAAGTCTCTAAAGAAATTAAATGAAAAATGACAAAATAGATTTT
GTTTCATCTGATGAATCTTTGCAATAATAAGAATAGACAGCTACAGACTTTTTTTAAAAT
GGAGCTCTCTCTGAGTTGATTAAGCAAAACGAAAACATTCAAAAGATATGTGTTTATCTT
AGAACTTTAAATGACATTAAAATGTCAGTATGCACTAAAATTGAGGCCATGAAGAATAAA
TTCCTACAACAAATATAAATGAAAGAATAAGATTTCAGTTATGCATTTTTGGCAAATACT
TTCAACCAAAATAATAACTAAGTAGAAGAAAACTTAAAGAGCTACTTTGCAAAAATACAG
CAACTAAATTCCTTTTTTGAAAAGAATTAACTAAGCTACAACCCTTAAGCTGCTAGCAAA
TAGAAACTAAGCTAGATTGAATAAGAACTTGATAGAATGCTTTTTTTTACTATTGAGAAA
ATAGATTAGGAAACTTTAAATTAAACTAAACTAATCAAGTAAGAACATATTGACCCTTTC
AAAGATAATTCAGAGTATGAAGAATTAACATAATTTTATCAAAACTAACCTGCTAATATT
GATGCAATCAAAGACAAAATAAACTTTTATTCTTAGTGTTAGCTCGAATTTGATGGAACA
TCAAAAGGAAACCCTGGAAGATCTGGAGCTGGCTTTATCATCAAAGATTTATACACTGAG
AATAAATTACTTGAGTATTCAGTAGAAGTAGGAACAAAAACTATCAATTAATCTGAGTAT
CTAGCTTTAATCTATGGAATGTATACTTGCTATAAGCTAGGTATTAAGCAGCTTACAATT
TAAGGTGACTCTGAAGTTGTGATAAAACACATGTTAGGTGTTTACTAATGCAGAAGCTAA
CAGCTCAGAGAATACTATAATCTAGCTAAAATTTTAGATGAGCTTTTCCATTTTAAGGAC
TACGTTTAAGTAAAAAAAGAGCTTAACACTGAAGCTGATGCACTAGCCAATCTAGCACTT
AGTTGA>TTHERM_00283900(protein)
MCYKCLPDHSLHSEQIVQLDNLSDKKNLDCQENINSSIDSNKNNKQGVSPLKVNSEFNGS
PFMLNNLANLKINSSSQEPSDQNVKRSSVKNSFSKVKEFNSTSNIEEEILDQGQIKQKKK
KSSISLDKPEKQIQLNNNTQSRKQEFRDVFVIKEENMDDDYTNCKIENGGNSHLKNTNAL
PQNGKKYSKESAQTKVFGTDMLSQISRQKGSSSQKNINQLLSQASTVSPSIQPVEKSMMD
VISNTTNYYPQYPFYPPHNPYENPFQFSTNFNPGHQMTYPHPHPQGYPPNQVNAPFSHLY
NQQHNFNNMPPYYPPTRSSYMPSFNHNYQQNHMLQEQETKEQYHTISDSSSSDKYFSKKD
KLSNERSLQRNQMKNDKIDFVSSDESLQQQEQTATDFFQNGALSELIKQNENIQKICVYL
RTLNDIKMSVCTKIEAMKNKFLQQIQMKEQDFSYAFLANTFNQNNNQVEENLKSYFAKIQ
QLNSFFEKNQLSYNPQAASKQKLSQIEQELDRMLFFTIEKIDQETLNQTKLIKQEHIDPF
KDNSEYEELTQFYQNQPANIDAIKDKINFYSQCQLEFDGTSKGNPGRSGAGFIIKDLYTE
NKLLEYSVEVGTKTINQSEYLALIYGMYTCYKLGIKQLTIQGDSEVVIKHMLGVYQCRSQ
QLREYYNLAKILDELFHFKDYVQVKKELNTEADALANLALS>TTHERM_00283900(gene)
ATGTGCTATAAGTGCCTTCCTGATCATAGTCTCCATTCTGAATAGATTGTTTAGCTTGAT
AACTTAAGTGATAAAAAAAACTTGGATTGCCAAGAGAATATCAATAGCTCTATAGACAGC
AACAAAAATAATAAGCAGGGAGTCAGTCCACTTAAGGTAAATAGCGAATTCAATGGATCT
CCTTTTATGTTAAATAATCTAGCTAACTTAAAAATAAACTCCAGCTCATAGGAGCCTTCA
GATTAAAACGTAAAAAGAAGTAGTGTTAAAAATAGTTTTAGCAAAGTAAAAGAATTCAAT
TCAACATCTAACATAGAAGAAGAAATACTTGACTAGGGTCAAATCAAGCAAAAAAAGAAA
AAATCTAGCATTTCTCTTGATAAGCCAGAAAAATAAATACAACTTAACAATAATACACAA
AGTAGAAAATAAGAATTTAGAGATGTGTTTGTAATTAAAGAAGAAAATATGGATGATGAT
TATACAAACTGTAAAATTGAGAATGGTGGTAATTCTCATTTGAAAAACACTAATGCTTTA
CCTCAAAATGGAAAGAAATATTCTAAAGAGTCTGCTCAAACTAAAGTTTTTGGGACAGAT
ATGTTGTCACAAATTTCCAGACAAAAAGGTAGTAGTTCCTAAAAAAACATAAATCAGTTA
CTAAGTTAAGCTTCCACAGTATCTCCAAGCATCTAACCTGTTGAGAAGAGTATGATGGAT
GTGATTTCTAATACAACTAATTATTATCCATAATATCCCTTCTATCCTCCTCATAATCCT
TATGAAAATCCTTTCTAATTTAGCACTAATTTTAATCCAGGCCACTAAATGACTTATCCT
CATCCACATCCTTAAGGGTACCCACCAAATTAGGTAAATGCGCCTTTTTCTCACCTCTAT
AACCAGTAACATAATTTTAACAATATGCCTCCTTACTATCCTCCTACTCGTTCTTCTTAT
ATGCCAAGCTTTAACCATAATTATTAGTAGAACCACATGCTTTAAGAGTAAGAAACTAAA
GAATAATATCATACTATATCTGATTCCAGTTCTAGTGATAAATATTTTTCAAAAAAAGAT
AAATTAAGTAATGAAAGAAGTCTCTAAAGAAATTAAATGAAAAATGACAAAATAGATTTT
GTTTCATCTGATGAATCTTTGCAATAATAAGAATAGACAGCTACAGACTTTTTTTAAAAT
GGAGCTCTCTCTGAGTTGATTAAGCAAAACGAAAACATTCAAAAGATATGTGTTTATCTT
AGAACTTTAAATGACATTAAAATGTCAGTATGCACTAAAATTGAGGCCATGAAGAATAAA
TTCCTACAACAAATATAAATGAAAGAATAAGATTTCAGTTATGCATTTTTGGCAAATACT
TTCAACCAAAATAATAACTAAGTAGAAGAAAACTTAAAGAGCTACTTTGCAAAAATACAG
CAACTAAATTCCTTTTTTGAAAAGAATTAACTAAGCTACAACCCTTAAGCTGCTAGCAAA
TAGAAACTAAGCTAGATTGAATAAGAACTTGATAGAATGCTTTTTTTTACTATTGAGAAA
ATAGATTAGGAAACTTTAAATTAAACTAAACTAATCAAGTAAGAACATATTGACCCTTTC
AAAGATAATTCAGAGTATGAAGAATTAACATAATTTTATCAAAACTAACCTGCTAATATT
GATGCAATCAAAGACAAAATAAACTTTTATTCTTAGTGTTAGCTCGAATTTGATGGAACA
TCAAAAGGAAACCCTGGAAGATCTGGAGCTGGCTTTATCATCAAAGATTTATACACTGAG
AATAAATTACTTGAGTATTCAGTAGAAGTAGGAACAAAAACTATCAATTAATCTGAGTAT
CTAGCTTTAATCTATGGAATGTATACTTGCTATAAGCTAGGTATTAAGCAGCTTACAATT
TAAGGTGACTCTGAAGTTGTGATAAAACACATGTTAGGTGTTTACTAATGCAGAAGCTAA
CAGCTCAGAGAATACTATAATCTAGCTAAAATTTTAGATGAGCTTTTCCATTTTAAGGAC
TACGTTTAAGTAAAAAAAGAGCTTAACACTGAAGCTGATGCACTAGCCAATCTAGCACTT
AGTTGA